Protein Cages: From Fundamentals to Advanced Applications DOI
Thomas G. W. Edwardson, Mikail D. Levasseur, Stephan Tetter

et al.

Chemical Reviews, Journal Year: 2022, Volume and Issue: 122(9), P. 9145 - 9197

Published: April 8, 2022

Proteins that self-assemble into polyhedral shell-like structures are useful molecular containers both in nature and the laboratory. Here we review efforts to repurpose diverse protein cages, including viral capsids, ferritins, bacterial microcompartments, designed capsules, as vaccines, drug delivery vehicles, targeted imaging agents, nanoreactors, templates for controlled materials synthesis, building blocks higher-order architectures, more. A deep understanding of principles underlying construction, function, evolution natural systems has been key tailoring selective cargo encapsulation interactions with biological synthetic through engineering directed evolution. The ability adapt design increasingly sophisticated capsid functions stands benefit fields catalysis, science, medicine.

Language: Английский

Potent antibody-mediated neutralization limits bacteriophage treatment of a pulmonary Mycobacterium abscessus infection DOI
Rebekah M. Dedrick, Krista G. Freeman,

Jan A. Nguyen

et al.

Nature Medicine, Journal Year: 2021, Volume and Issue: 27(8), P. 1357 - 1361

Published: July 8, 2021

Language: Английский

Citations

143

Systematic discovery of recombinases for efficient integration of large DNA sequences into the human genome DOI Creative Commons
Matthew G. Durrant, Alison Fanton, Josh Tycko

et al.

Nature Biotechnology, Journal Year: 2022, Volume and Issue: 41(4), P. 488 - 499

Published: Oct. 10, 2022

Abstract Large serine recombinases (LSRs) are DNA integrases that facilitate the site-specific integration of mobile genetic elements into bacterial genomes. Only a few LSRs, such as Bxb1 and PhiC31, have been characterized to date, with limited efficiency tools for in human cells. In this study, we developed computational approach identify thousands LSRs their attachment sites, expanding known LSR diversity by >100-fold enabling prediction insertion site specificities. We tested recombination activity cells, classifying them landing pad, genome-targeting or multi-targeting LSRs. Overall, achieved up seven-fold higher than genome efficiencies 40–75% cargo sizes over 7 kb. also demonstrate virus-free, direct plasmid amplicon libraries improved functional genomics applications. This systematic discovery directly from microbial sequencing data provides resource 60 experimentally cells large-payload without exposed double-stranded breaks.

Language: Английский

Citations

130

Effects and relevant mechanisms of non-antibiotic factors on the horizontal transfer of antibiotic resistance genes in water environments: A review DOI
Qi Jiang, Mingbao Feng, Chengsong Ye

et al.

The Science of The Total Environment, Journal Year: 2021, Volume and Issue: 806, P. 150568 - 150568

Published: Sept. 24, 2021

Language: Английский

Citations

118

Phages against Pathogenic Bacterial Biofilms and Biofilm-Based Infections: A Review DOI Creative Commons
Siyu Liu,

Hongyun Lu,

Shengliang Zhang

et al.

Pharmaceutics, Journal Year: 2022, Volume and Issue: 14(2), P. 427 - 427

Published: Feb. 16, 2022

Bacterial biofilms formed by pathogens are known to be hundreds of times more resistant antimicrobial agents than planktonic cells, making it extremely difficult cure biofilm-based infections despite the use antibiotics, which poses a serious threat human health. Therefore, there is an urgent need develop promising alternative therapies reduce burden drug-resistant bacterial caused biofilms. As natural enemies bacteria, bacteriophages (phages) have advantages high specificity, safety and non-toxicity, possess great potential in defense removal pathogenic biofilms, considered alternatives treat diseases. This work mainly reviews composition, structure formation process briefly discusses interaction between phages summarizes several strategies based on their derivatives against serving purpose developing novel, safe effective treatment methods promoting application maintaining

Language: Английский

Citations

106

Protein Cages: From Fundamentals to Advanced Applications DOI
Thomas G. W. Edwardson, Mikail D. Levasseur, Stephan Tetter

et al.

Chemical Reviews, Journal Year: 2022, Volume and Issue: 122(9), P. 9145 - 9197

Published: April 8, 2022

Proteins that self-assemble into polyhedral shell-like structures are useful molecular containers both in nature and the laboratory. Here we review efforts to repurpose diverse protein cages, including viral capsids, ferritins, bacterial microcompartments, designed capsules, as vaccines, drug delivery vehicles, targeted imaging agents, nanoreactors, templates for controlled materials synthesis, building blocks higher-order architectures, more. A deep understanding of principles underlying construction, function, evolution natural systems has been key tailoring selective cargo encapsulation interactions with biological synthetic through engineering directed evolution. The ability adapt design increasingly sophisticated capsid functions stands benefit fields catalysis, science, medicine.

Language: Английский

Citations

97