Melatonin alleviates cadmium toxicity by regulating root endophytic bacteria community structure and metabolite composition in apple DOI
Yang Cao,

Jiran Zhang,

Peihua Du

et al.

Tree Physiology, Journal Year: 2024, Volume and Issue: 44(2)

Published: Jan. 15, 2024

Abstract The level of cadmium (Cd) accumulation in orchard soils is increasing, and excess Cd will cause serious damage to plants. Melatonin a potent natural antioxidant has potential role alleviating stress. This study aimed investigate the effects exogenous melatonin on root endophyte bacteria community metabolite composition under results showed that significantly scavenged reactive oxygen species restored photosynthetic system (manifested by improved parameters, total chlorophyll content fluorescence parameters (Fv/Fm)), increased activity enzymes (the activities catalase, superoxide dismutase, peroxidase ascorbate oxidase) reduced concentration roots leaves apple High-throughput sequencing endophytic bacterial richness changed structure abundance some potentially beneficial (Ohtaekwangia, Streptomyces, Tabrizicola Azovibrio) significantly, indicating plants may absorb microorganisms resist metabolomics metabolites, relative metabolites decreased, suggesting stress depleting metabolites. In addition, co-occurrence network analysis indicated endophytes be influenced specific These provide theoretical basis for studying metabolic

Language: Английский

Rhizosphere Microbiome Assembly and Its Impact on Plant Growth DOI
Qian Qu, Zhenyan Zhang, Willie J.G.M. Peijnenburg

et al.

Journal of Agricultural and Food Chemistry, Journal Year: 2020, Volume and Issue: 68(18), P. 5024 - 5038

Published: April 7, 2020

Microorganisms colonizing the plant rhizosphere provide a number of beneficial functions for their host. Although an increasing investigations clarified great functional capabilities microbial communities, understanding precise mechanisms underlying impact microbiome assemblies is still limited. Also, not much known about various microbiome. In this review, we summarize current knowledge biotic and abiotic factors that shape as well traits are to plants growth disease-resistance. We give particular emphasis on root metabolites how contributes growth, yield, Finally, introduce new perspective novel method showing synthetic community construction provides effective approach unravel plant–microbes microbes–microbes interplays.

Language: Английский

Citations

364

Soil microbial network complexity predicts ecosystem function along elevation gradients on the Tibetan Plateau DOI
Wenqing Chen, Jianyu Wang, Xiang Chen

et al.

Soil Biology and Biochemistry, Journal Year: 2022, Volume and Issue: 172, P. 108766 - 108766

Published: June 25, 2022

Language: Английский

Citations

224

Vegetation restoration facilitates belowground microbial network complexity and recalcitrant soil organic carbon storage in southwest China karst region DOI

Linan Hu,

Qiang Li,

Jiahui Yan

et al.

The Science of The Total Environment, Journal Year: 2022, Volume and Issue: 820, P. 153137 - 153137

Published: Jan. 15, 2022

Language: Английский

Citations

123

Fusarium fruiting body microbiome member Pantoea agglomerans inhibits fungal pathogenesis by targeting lipid rafts DOI

Sunde Xu,

Yongxin Liu, Tomislav Cernava

et al.

Nature Microbiology, Journal Year: 2022, Volume and Issue: 7(6), P. 831 - 843

Published: May 26, 2022

Language: Английский

Citations

78

Legume rhizodeposition promotes nitrogen fixation by soil microbiota under crop diversification DOI Creative Commons
Mengjie Qiao,

Ruibo Sun,

Zixuan Wang

et al.

Nature Communications, Journal Year: 2024, Volume and Issue: 15(1)

Published: April 4, 2024

Abstract Biological nitrogen fixation by free-living bacteria and rhizobial symbiosis with legumes plays a key role in sustainable crop production. Here, we study how different combinations influence the interaction between peanut plants their rhizosphere microbiota via metabolite deposition functional responses of symbiotic nitrogen-fixing bacteria. Based on long-term (8 year) diversified cropping field experiment, find that co-cultured maize oilseed rape lead to specific changes profiles bacterial functions nodulation. Flavonoids coumarins accumulate due activation phenylpropanoid biosynthesis pathways peanuts. These enhance growth activity isolates, root nodulation Bradyrhizobium isolates. Peanut plant metabolites interact isolates contributing initiate Our findings demonstrate tailored intercropping could be used improve soil availability through microbiome its functions.

Language: Английский

Citations

34

The salt-tolerance of perennial ryegrass is linked with root exudate profiles and microflora recruitment DOI
Yanhua Cao,

Xiong‐Wei Zhao,

Gang Nie

et al.

The Science of The Total Environment, Journal Year: 2024, Volume and Issue: 916, P. 170205 - 170205

Published: Jan. 23, 2024

Language: Английский

Citations

19

Bacillus Responses to Plant-Associated Fungal and Bacterial Communities DOI Creative Commons
Sofija Andrić, Thibault De Meyer, Marc Ongena

et al.

Frontiers in Microbiology, Journal Year: 2020, Volume and Issue: 11

Published: June 23, 2020

Some members of root-associated Bacillus species have been developed as biocontrol agents due to their contribution plant protection by directly interfering with the growth pathogens or stimulating systemic resistance in host. As rhizosphere-dwelling bacteria, these bacilli are surrounded and constantly interacting other microbes via different types communications. With this review, we provide an updated vision molecular phenotypic responses upon sensing rhizosphere microorganisms and/or metabolites. We illustrate how spp. may react modulating production secondary metabolites, such cyclic lipopeptides polyketides. On hand, some developmental processes, biofilm formation, motility, sporulation also be modified interaction, reflecting adaptation multicellular communities microbial competitors for preserving ecological persistence. This review points out limited data available a global lack knowledge indicating that more research is needed order to, not only better understand ecology natural soil niche, but assess improve promising potential.

Language: Английский

Citations

113

Effects of aerosol pollution on PM2.5-associated bacteria in typical inland and coastal cities of northern China during the winter heating season DOI
Min Wei,

Houfeng Liu,

Jianmin Chen

et al.

Environmental Pollution, Journal Year: 2020, Volume and Issue: 262, P. 114188 - 114188

Published: Feb. 19, 2020

Language: Английский

Citations

75

Global analysis of biosynthetic gene clusters reveals conserved and unique natural products in entomopathogenic nematode-symbiotic bacteria DOI Creative Commons
Yi‐Ming Shi,

Merle Hirschmann,

Yan‐Ni Shi

et al.

Nature Chemistry, Journal Year: 2022, Volume and Issue: 14(6), P. 701 - 712

Published: April 25, 2022

Abstract Microorganisms contribute to the biology and physiology of eukaryotic hosts affect other organisms through natural products. Xenorhabdus Photorhabdus ( XP ) living in mutualistic symbiosis with entomopathogenic nematodes generate products mediate bacteria–nematode–insect interactions. However, a lack systematic analysis biosynthetic gene clusters (BGCs) has limited understanding how interactions between organisms. Here we combine pangenome sequence similarity networks analyse BGCs from 45 strains that cover all sequenced our collection represent almost taxonomy. The identified 1,000 belong 176 families. most conserved families are denoted by 11 BGC classes. We homologously (over)express ubiquitous unique identify compounds featuring unusual architectures. bioactivity evaluation demonstrates prevalent proteasome inhibitors, virulence factors against insects, metallophores insect immunosuppressants. These findings explain functional basis bacterial this tripartite relationship.

Language: Английский

Citations

69

Effects of S-metolachlor on wheat (Triticum aestivum L.) seedling root exudates and the rhizosphere microbiome DOI
Qian Qu, Yan Li, Zhenyan Zhang

et al.

Journal of Hazardous Materials, Journal Year: 2021, Volume and Issue: 411, P. 125137 - 125137

Published: Jan. 14, 2021

Language: Английский

Citations

66