Nature Communications,
Journal Year:
2020,
Volume and Issue:
11(1)
Published: Feb. 20, 2020
Abstract
Despite
hundreds
of
sequenced
Arabidopsis
genomes,
very
little
is
known
about
the
degree
genomic
collinearity
within
single
species,
due
to
low
number
chromosome-level
assemblies.
Here,
we
report
reference-quality
assemblies
seven
thaliana
accessions
selected
across
its
global
range.
Each
genome
reveals
between
13–17
Mb
rearranged,
and
5–6
non-reference
sequences
introducing
copy-number
changes
in
~5000
genes,
including
~1900
genes.
Quantifying
genomes
~350
euchromatic
regions,
where
accession-specific
tandem
duplications
destroy
genomes.
These
hotspots
rearrangements
are
characterized
by
reduced
meiotic
recombination
hybrids
genes
implicated
biotic
stress
response.
This
suggests
that
undergo
altered
evolutionary
dynamics,
as
compared
rest
genome,
which
mostly
based
on
accumulation
new
mutations
not
existing
variation,
thereby
enable
a
quick
response
stress.
Nature Communications,
Journal Year:
2020,
Volume and Issue:
11(1)
Published: May 12, 2020
Abstract
Microplastics
are
ubiquitous
in
estuarine,
coastal,
and
deep
sea
sediments.
The
impacts
of
microplastics
on
sedimentary
microbial
ecosystems
biogeochemical
carbon
nitrogen
cycles,
however,
have
not
been
well
reported.
To
evaluate
if
influence
the
composition
function
communities,
we
conducted
a
microcosm
experiment
using
salt
marsh
sediment
amended
with
polyethylene
(PE),
polyvinyl
chloride
(PVC),
polyurethane
foam
(PUF)
or
polylactic
acid
(PLA)
microplastics.
We
report
that
presence
alters
community
cycling
processes.
Compared
to
control
sediments
without
microplastic,
PUF-
PLA-amended
promote
nitrification
denitrification,
while
PVC
amendment
inhibits
both
These
results
indicate
processes
can
be
significantly
affected
by
different
microplastics,
which
may
serve
as
organic
substrates
for
communities.
Considering
this
evidence
increasing
microplastic
pollution,
impact
plastics
global
merits
critical
investigation.
Annals of Global Health,
Journal Year:
2020,
Volume and Issue:
86(1), P. 151 - 151
Published: Dec. 3, 2020
Background:
Pollution
–
unwanted
waste
released
to
air,
water,
and
land
by
human
activity
is
the
largest
environmental
cause
of
disease
in
world
today.
It
responsible
for
an
estimated
nine
million
premature
deaths
per
year,
enormous
economic
losses,
erosion
capital,
degradation
ecosystems.
Ocean
pollution
important,
but
insufficiently
recognized
inadequately
controlled
component
global
pollution.
poses
serious
threats
health
well-being.
The
nature
magnitude
these
impacts
are
only
beginning
be
understood.
Goals:
(1)
Broadly
examine
known
potential
ocean
on
health.
(2)
Inform
policy
makers,
government
leaders,
international
organizations,
civil
society,
public
threats.
(3)
Propose
priorities
interventions
control
prevent
seas
safeguard
Methods:
Topic-focused
reviews
that
effects
health,
identify
gaps
knowledge,
project
future
trends,
offer
evidence-based
guidance
effective
intervention.
Environmental
Findings:
oceans
widespread,
worsening,
most
countries
poorly
controlled.
a
complex
mixture
toxic
metals,
plastics,
manufactured
chemicals,
petroleum,
urban
industrial
wastes,
pesticides,
fertilizers,
pharmaceutical
agricultural
runoff,
sewage.
More
than
80%
arises
from
land-based
sources.
reaches
through
rivers,
atmospheric
deposition
direct
discharges.
often
heaviest
near
coasts
highly
concentrated
along
low-
middle-income
countries.
Plastic
rapidly
increasing
visible
pollution,
10
metric
tons
plastic
enter
each
year.
Mercury
metal
pollutant
greatest
concern
oceans;
it
two
main
sources
coal
combustion
small-scale
gold
mining.
Global
spread
industrialized
agriculture
with
use
chemical
fertilizer
leads
extension
Harmful
Algal
Blooms
(HABs)
previously
unaffected
regions.
Chemical
pollutants
ubiquitous
contaminate
marine
organisms
high
Arctic
abyssal
depths.
Ecosystem
has
multiple
negative
ecosystems,
exacerbated
climate
change.
Petroleum-based
reduce
photosynthesis
microorganisms
generate
oxygen.
Increasing
absorption
carbon
dioxide
into
causes
acidification,
which
destroys
coral
reefs,
impairs
shellfish
development,
dissolves
calcium-containing
at
base
food
web,
increases
toxicity
some
pollutants.
threatens
mammals,
fish,
seabirds
accumulates
large
mid-ocean
gyres.
breaks
down
microplastic
nanoplastic
particles
containing
chemicals
can
tissues
organisms,
including
species
consumed
humans.
Industrial
releases,
sewage
increase
frequency
severity
HABs,
bacterial
anti-microbial
resistance.
sea
surface
warming
triggering
poleward
migration
dangerous
pathogens
such
as
Vibrio
species.
discharges,
contribute
declines
fish
stocks.
Human
Health
Methylmercury
PCBs
whose
best
Exposures
infants
in
utero
maternal
consumption
contaminated
seafood
damage
developing
brains,
IQ
children's
risks
autism,
ADHD
learning
disorders.
Adult
exposures
methylmercury
cardiovascular
dementia.
Manufactured
phthalates,
bisphenol
A,
flame
retardants,
perfluorinated
many
them
disrupt
endocrine
signaling,
male
fertility,
nervous
system,
risk
cancer.
HABs
produce
potent
toxins
accumulate
shellfish.
When
ingested,
severe
neurological
impairment
rapid
death.
HAB
also
become
airborne
respiratory
disease.
Pathogenic
bacteria
gastrointestinal
diseases
deep
wound
infections.
With
change
infections,
cholera,
will
extend
new
areas.
All
fall
disproportionately
vulnerable
populations
South
injustice
planetary
scale.
Conclusions:
problem.
crosses
national
boundaries.
consequence
reckless,
shortsighted,
unsustainable
exploitation
earth's
resources.
endangers
impedes
production
Its
great
growing,
still
incompletely
costs
counted.
prevented.
Like
all
forms
deploying
data-driven
strategies
based
law,
policy,
technology,
enforcement
target
priority
Many
have
used
tools
air
water
now
applying
Successes
achieved
date
demonstrate
broader
feasible.
Heavily
polluted
harbors
been
cleaned,
estuaries
rejuvenated,
reefs
restored.
Prevention
creates
benefits.
boosts
economies,
tourism,
helps
restore
fisheries,
improves
advances
Sustainable
Development
Goals
(SDG).
These
benefits
last
centuries.
Recommendations:
World
leaders
who
recognize
gravity
acknowledge
its
growing
dangers,
engage
society
public,
take
bold,
action
stop
source
critical
preventing
safeguarding
key.
Eliminating
banning
uses
mercury
Bans
single-use
better
management
persistent
organic
(POPs)
reduced
DDT.
Control
treatment
sewage,
applications
fertilizers
mitigated
coastal
reducing
HABs.
National,
regional
programs
adequately
funded
backed
strong
shown
effective.
Robust
monitoring
essential
track
progress.
Further
hold
promise
include
wide-scale
transition
renewable
fuels;
circular
economy
little
focuses
equity
rather
endless
growth;
embracing
principles
green
chemistry;
building
scientific
capacity
Designation
Marine
Protected
Areas
(MPAs)
protect
stocks,
enhance
Creation
MPAs
important
manifestation
commitment
protecting
seas.
Cancer Cell,
Journal Year:
2021,
Volume and Issue:
39(12), P. 1578 - 1593.e8
Published: Oct. 16, 2021
In
triple-negative
breast
cancer
(TNBC),
the
benefit
of
combining
chemotherapy
with
checkpoint
inhibitors
is
still
not
very
clear.
We
utilize
single-cell
RNA-
and
ATAC-sequencing
to
examine
immune
cell
dynamics
in
22
patients
advanced
TNBC
treated
paclitaxel
or
its
combination
anti-PD-L1
atezolizumab.
demonstrate
that
high
levels
baseline
CXCL13+
T
cells
are
linked
proinflammatory
features
macrophages
can
predict
effective
responses
therapy.
responsive
patients,
lymphoid
tissue
inducer
(LTi)
cells,
follicular
B
(Bfoc)
conventional
type
1
dendritic
(cDC1)
concertedly
increase
following
therapy,
but
instead
decrease
after
monotherapy.
Our
data
highlight
importance
therapies
suggest
their
reduction
by
regimen
may
compromise
clinical
outcomes
accompanying
atezolizumab
for
treatment.
Reports on Progress in Physics,
Journal Year:
2021,
Volume and Issue:
84(9), P. 096502 - 096502
Published: June 10, 2021
Although
the
contact
electrification
(CE)
(or
usually
called
'triboelectrification')
effect
has
been
known
for
over
2600
years,
its
scientific
mechanism
still
remains
debated
after
decades.
Interest
in
studying
CE
recently
revisited
due
to
invention
of
triboelectric
nanogenerators
(TENGs),
which
are
most
effective
approach
converting
random,
low-frequency
mechanical
energy
(called
high
entropy
energy)
into
electric
power
distributed
applications.
This
review
is
composed
three
parts
that
coherently
linked,
ranging
from
basic
physics,
through
classical
electrodynamics,
technological
advances
and
engineering
First,
mechanisms
studied
general
cases
involving
solids,
liquids
gas
phases.
Various
physics
models
presented
explain
fundamentals
by
illustrating
electron
transfer
dominant
solid-solid
interfaces.
Electron
also
occurs
at
liquid-solid
liquid-liquid
An
electron-cloud
overlap
model
proposed
general.
extended
interfaces,
leading
a
revision
formation
double
layer
Second,
adding
time-dependent
polarization
term
Bioinformatics,
Journal Year:
2020,
Volume and Issue:
37(3), P. 422 - 423
Published: July 27, 2020
Abstract
Motivation
Generating
publication
ready
plots
to
display
multiple
genomic
tracks
can
pose
a
serious
challenge.
Making
desirable
and
accurate
figures
requires
considerable
effort.
This
is
usually
done
by
hand
or
using
vector
graphic
software.
Results
pyGenomeTracks
(PGT)
modular
plotting
tool
that
easily
combines
tracks.
It
enables
reproducible
standardized
generation
of
highly
customizable
images.
Availability
implementation
PGT
available
through
graphical
interface
on
https://usegalaxy.eu
the
command
line.
provided
conda
via
bioconda
channel,
pip
it
openly
developed
github:
https://github.com/deeptools/pyGenomeTracks.
Supplementary
information
data
are
at
Bioinformatics
online.