Genome-Wide Identification and Expression Analysis of the YTH Domain-Containing Protein Gene Family in Salvia miltiorrhiza DOI Open Access

Chunling Wang,

Yunliang Peng,

Xian Pan

et al.

International Journal of Molecular Sciences, Journal Year: 2025, Volume and Issue: 26(10), P. 4645 - 4645

Published: May 13, 2025

YTH domain-containing proteins act as the primary readers of N6-methyladenosine (m6A), playing an important role in plant development and stress responses. However, little is known about medicinal plants. Genome-wide identification gene family model plant, Salvia miltiorrhiza Bunge, identified a total nineteen SmYTH genes from five chromosomes, with SmYTH8–SmYTH19 clustered on chromosome 8. Phylogenetic analysis showed that belong to YTHDF category. No YTHDC members were identified. Conserved domain identification, amino acid sequence alignment, phase separation prediction revealed SmYTH1–SmYTH4 exhibited characteristic m6A reader protein feature, containing conserved aromatic cages (WWW) capable binding residues. SmYTH5–SmYTH19 contain unique F-box interaction has not been reported previously. qRT-PCR tissue-specific patterns, highly expressed roots leaves, whereas mainly leaves. The results consistent RNA-seq data. expression various SmYTHs content phenolic active ingredients significantly altered under MeJA SA treatments. provide useful information for further studies biological functions S. miltiorrhiza.

Language: Английский

The multifaceted role of microRNA in medicinal plants DOI Creative Commons

Yurong Yang,

Wang Chen,

Zhinan Mei

et al.

Medicinal Plant Biology, Journal Year: 2025, Volume and Issue: 4(1), P. 0 - 0

Published: Jan. 1, 2025

Language: Английский

Citations

0
Genome-Wide Identification and Expression Analysis of the YTH Domain-Containing Protein Gene Family in Salvia miltiorrhiza DOI Open Access

Chunling Wang,

Yunliang Peng,

Xian Pan

et al.

International Journal of Molecular Sciences, Journal Year: 2025, Volume and Issue: 26(10), P. 4645 - 4645

Published: May 13, 2025

YTH domain-containing proteins act as the primary readers of N6-methyladenosine (m6A), playing an important role in plant development and stress responses. However, little is known about medicinal plants. Genome-wide identification gene family model plant, Salvia miltiorrhiza Bunge, identified a total nineteen SmYTH genes from five chromosomes, with SmYTH8–SmYTH19 clustered on chromosome 8. Phylogenetic analysis showed that belong to YTHDF category. No YTHDC members were identified. Conserved domain identification, amino acid sequence alignment, phase separation prediction revealed SmYTH1–SmYTH4 exhibited characteristic m6A reader protein feature, containing conserved aromatic cages (WWW) capable binding residues. SmYTH5–SmYTH19 contain unique F-box interaction has not been reported previously. qRT-PCR tissue-specific patterns, highly expressed roots leaves, whereas mainly leaves. The results consistent RNA-seq data. expression various SmYTHs content phenolic active ingredients significantly altered under MeJA SA treatments. provide useful information for further studies biological functions S. miltiorrhiza.

Language: Английский

Citations

0