ctDNA-based liquid biopsy reveals wider mutational profile with therapy resistance and metastasis susceptibility signatures in early-stage breast cancer patients DOI Creative Commons

Atul Bharde,

Snigdha Nadagouda,

Manoj Dongare

et al.

The Journal of Liquid Biopsy, Journal Year: 2024, Volume and Issue: 7, P. 100284 - 100284

Published: Dec. 28, 2024

Language: Английский

Combination of Hotspot Mutations With Methylation and Fragmentomic Profiles to Enhance Multi‐Cancer Early Detection DOI Creative Commons

Thi Hue Hanh Nguyen,

Hoang‐Giang Vu, Tu Thi Nguyen

et al.

Cancer Medicine, Journal Year: 2025, Volume and Issue: 14(1)

Published: Jan. 1, 2025

ABSTRACT Background Multi‐cancer early detection (MCED) through a single blood test significantly advances cancer diagnosis. However, most MCED tests rely on type of biomarkers, leading to limited sensitivity, particularly for early‐stage cancers. We previously developed SPOT‐MAS, multimodal ctDNA‐based assay analyzing methylation and fragmentomic profiles detect five common Despite its potential, SPOT‐MAS exhibited moderate sensitivities This study investigated whether integrating hotspot mutations into could enhance rates. Method A targeted amplicon sequencing approach was profile 700 in cell‐free DNA integrated the assay, creating single‐blood draw workflow. workflow, namely Plus retrospectively validated cohort 255 non‐metastatic patients (breast, colorectal, gastric, liver, lung) 304 healthy individuals. Results Hotspot were detected 131 (51.4%) patients, with highest rates liver (96.5%), followed by colorectal (59.3%) lung (53.7%). Lower found cancers low tumor mutational burden, such as breast (31.3%) gastric (41.9%) In contrast, demonstrated higher these (51.6% 62.9% gastric). The combination predictions improved detection, achieving an overall sensitivity 78.5% at specificity 97.7%. Enhanced observed (81.36%) (82.9%). Conclusion integration genetic epigenetic alterations enhances various Further validation larger cohorts is necessary support broader clinical applications.

Language: Английский

Citations

1

Minimal residue disease detection in early-stage breast cancer: a review DOI
Yuan Zhang, Xiao‐Ying Yuan

Molecular Biology Reports, Journal Year: 2025, Volume and Issue: 52(1)

Published: Jan. 7, 2025

Language: Английский

Citations

1

The biological and technical challenges facing utilizing circulating tumor DNA in non-metastatic breast cancer patients DOI
Zihang Zeng, Zongbi Yi, Binghe Xu

et al.

Cancer Letters, Journal Year: 2025, Volume and Issue: 616, P. 217574 - 217574

Published: Feb. 19, 2025

Language: Английский

Citations

1

Target-activated CRISPR/Cas12a recognize multifunctional G-quadruplex and dual fluorescent indicators enable rapid non-extraction analysis of circulating tumor DNA in breast cancer DOI
Xin Zhao, Weijing Liu,

Runlian Qu

et al.

Sensors and Actuators B Chemical, Journal Year: 2025, Volume and Issue: unknown, P. 137372 - 137372

Published: Feb. 1, 2025

Language: Английский

Citations

0

Prospective validation study: a non-invasive circulating tumor DNA-based assay for simultaneous early detection of multiple cancers in asymptomatic adults DOI Creative Commons
Lưu Hồng Đăng Nguyễn,

Thi Hue Hanh Nguyen,

Van Hoi Le

et al.

BMC Medicine, Journal Year: 2025, Volume and Issue: 23(1)

Published: Feb. 14, 2025

Non-invasive multi-cancer early detection (MCED) tests have shown promise in enhancing cancer detection. However, their clinical utility across diverse populations remains underexplored, limiting routine implementation. This study aims to validate the of a multimodal non-invasive circulating tumor DNA (ctDNA)-based MCED test, SPOT-MAS (Screening for Presence Of Tumor by Methylation And Size). We conducted multicenter prospective study, K-DETEK (ClinicalTrials.gov identifier: NCT05227261), involving 9057 asymptomatic individuals aged 40 years or older 75 major hospitals and one research institute Vietnam. Participants were followed 12 months. 9024 eligible participants, 43 (0.48%) tested positive ctDNA. Among these, 17 confirmed with malignant lesions various primary organs through standard-of-care (SOC) imaging biopsy, 9 cases matching our tissue origin (TOO) predictions. resulted predictive value 39.53% (95%CI 26.37–54.42) TOO accuracy 52.94% 30.96–73.83). 8981 participants (99.52%) who negative, 8974 cancer-free during 12-month period after testing, yielding negative 99.92% (95% CI 99.84–99.96). The test demonstrated an overall sensitivity 70.83% 50.83–85.09) specificity 99.71% 99.58–99.80) detecting types, including those without SOC screening options. presents validation lower middle-income country, demonstrating potential Our findings indicate that could be valuable additions national programs, particularly regions where such initiatives are currently limited. ClinicalTrials.gov ID: NCT05227261. Date registration: 07/02/2022.

Language: Английский

Citations

0

Cholangiocarcinoma: The era of liquid biopsy DOI
Evgenia Kotsifa, Francesca Saffioti, Vasileios Mavroeidis

et al.

World Journal of Gastroenterology, Journal Year: 2025, Volume and Issue: 31(11)

Published: March 12, 2025

Cholangiocarcinoma (CCA) is a highly aggressive and heterogeneous malignancy arising from the epithelial cells of biliary tract. The limitations current methods in diagnosis CCA highlight urgent need for new, accurate tools early cancer detection, better prognostication patient monitoring. Liquid biopsy (LB) modern non-invasive technique comprising diverse group methodologies aiming to detect tumour biomarkers body fluids. These include circulating cells, cell-free DNA, RNA extracellular vesicles. aim this review explore potential future applications LB management, with focus on diagnosis, We examine both its significant inevitable associated technology. conclude that holds considerable promise, but further research necessary fully integrate it into precision oncology CCA.

Language: Английский

Citations

0

Minimal Residual Disease in Metastatic Soft Tissue Sarcoma DOI
Ioannis Kournoutas, Brittany L. Siontis

Current Treatment Options in Oncology, Journal Year: 2025, Volume and Issue: unknown

Published: March 12, 2025

Language: Английский

Citations

0

Advancing ctDNA detection: Using whole-genome sequencing to power minimal residual disease monitoring in breast cancer. DOI
Lars Dyrskjøt, Nicolai J. Birkbak

Annals of Oncology, Journal Year: 2025, Volume and Issue: unknown

Published: March 1, 2025

Language: Английский

Citations

0

The Role of ctDNA in Breast Cancer: Prognosis and Clinical Utility DOI

Mairi Lucas,

Stephen Chia

Canadian oncology today., Journal Year: 2025, Volume and Issue: unknown

Published: April 11, 2025

Breast cancer remains the most common among women globally, with significant morbidity and mortality. Current treatment for breast cancer, both in early stage metastatic setting, is based on a tumour biopsy immunohistochemical detection of estrogen receptor (ER), progesterone (PR), human epidermal growth factor 2 (HER2) expression. Though substantial research has been undertaken over years to establish new prognostic predictive biomarkers have not demonstrated clinical utility. Circulating DNA (ctDNA) increasingly used across various types precision medicine. In this article, we discuss current roles ctDNA prognosis its utility decision-making early- advanced-stage settings.

Language: Английский

Citations

0

DNA methylation in breast cancer: early detection and biomarker discovery through current and emerging approaches DOI Creative Commons

Melissa Hum,

Ann S. G. Lee

Journal of Translational Medicine, Journal Year: 2025, Volume and Issue: 23(1)

Published: April 23, 2025

Breast cancer remains one of the most common cancers in women worldwide. Early detection is critical for improving patient outcomes, yet current screening methods have limitations. Therefore, there a pressing need more sensitive and specific approaches to detect breast its earliest stages. Liquid biopsy has emerged as promising non-invasive method early management. DNA methylation, an epigenetic alteration that often precedes genetic changes, been observed precancerous or stages, making it valuable biomarker. This review explores role methylation potential developing blood-based tests. We discuss advancements methods, recent discoveries biomarkers from both single-omics multi-omics integration studies, machine learning enhancing diagnostic accuracy. Challenges future directions are also addressed. Although challenges remain, advances continue enhance clinical methylation-based biomarkers. Ongoing research crucial further refine these improve outcomes.

Language: Английский

Citations

0