Olympus, enhanced: benchmarking mixed-parameter and multi-objective optimization in chemistry and materials science DOI Creative Commons
Riley J. Hickman,

P.N. Parakh,

Austin Cheng

et al.

Published: May 18, 2023

Experiment planning algorithms are a required component of autonomous platforms for scientific discovery. Selecting suitable optimization algorithm novel application is an important yet difficult choice researcher has to make based on past empirical performance similar tasks. To facilitate the evaluation various chemistry and materials science tasks, we previously introduced OLYMPUS (Mach. Learn.: Sci. Technol. 2, 035021, 2021), Python package providing consistent easy-to-use interface numerous benchmark datasets. While original was limited continuous parameters single objectives, in this work expand OLYMPUS' capabilities include mixed (continuous, discrete, categorical) parameter types multiple objectives. Several experiment already contained extended handle categorical discrete types, five additional planners implemented (23 total). We also provide 23 datasets taken from literature (33 total), covering wide range research areas, chemical reaction manufacturing. Finally, visualization enhanced allow easy inspection results, core functionality embedded Streamlit web code-free usage. demonstrate how enables researchers rapidly different strategies gain insight into their behavior by focusing two case studies: Suzuki-Miyaura cross-coupling with conditions, multi-objective redox-active materials. The updated provides practitioners large suite tools efficiently analyze mixed-parameter

Language: Английский

The rise of self-driving labs in chemical and materials sciences DOI Open Access
Milad Abolhasani, Eugenia Kumacheva

Nature Synthesis, Journal Year: 2023, Volume and Issue: 2(6), P. 483 - 492

Published: Jan. 30, 2023

Language: Английский

Citations

265

Combinatorial synthesis for AI-driven materials discovery DOI
John M. Gregoire, Lan Zhou, Joel A. Haber

et al.

Nature Synthesis, Journal Year: 2023, Volume and Issue: 2(6), P. 493 - 504

Published: March 9, 2023

Language: Английский

Citations

54

In Pursuit of the Exceptional: Research Directions for Machine Learning in Chemical and Materials Science DOI
Joshua Schrier, Alexander J. Norquist,

Tonio Buonassisi

et al.

Journal of the American Chemical Society, Journal Year: 2023, Volume and Issue: 145(40), P. 21699 - 21716

Published: Sept. 27, 2023

Exceptional molecules and materials with one or more extraordinary properties are both technologically valuable fundamentally interesting, because they often involve new physical phenomena compositions that defy expectations. Historically, exceptionality has been achieved through serendipity, but recently, machine learning (ML) automated experimentation have widely proposed to accelerate target identification synthesis planning. In this Perspective, we argue the data-driven methods commonly used today well-suited for optimization not realization of exceptional molecules. Finding such outliers should be possible using ML, only by shifting away from traditional ML approaches tweak composition, crystal structure, reaction pathway. We highlight case studies high-Tc oxide superconductors superhard demonstrate challenges ML-guided discovery discuss limitations automation task. then provide six recommendations development capable discovery: (i) Avoid tyranny middle focus on extrema; (ii) When data limited, qualitative predictions direction than interpolative accuracy; (iii) Sample what can made how make it defer optimization; (iv) Create room (and look) unexpected while pursuing your goal; (v) Try fill-in-the-blanks input output space; (vi) Do confuse human understanding model interpretability. conclude a description these integrated into workflows, which enable materials.

Language: Английский

Citations

46

Accelerated chemical science with AI DOI Creative Commons
Seoin Back,

Alán Aspuru-Guzik,

Michele Ceriotti

et al.

Digital Discovery, Journal Year: 2023, Volume and Issue: 3(1), P. 23 - 33

Published: Dec. 6, 2023

The ASLLA Symposium focused on accelerating chemical science with AI. Discussions data, new applications, algorithms, and education were summarized. Recommendations for researchers, educators, academic bodies provided.

Language: Английский

Citations

46

Embracing data science in catalysis research DOI
Manu Suvarna, Javier Pérez‐Ramírez

Nature Catalysis, Journal Year: 2024, Volume and Issue: 7(6), P. 624 - 635

Published: April 23, 2024

Language: Английский

Citations

29

Rapid planning and analysis of high-throughput experiment arrays for reaction discovery DOI Creative Commons
Babak Mahjour, Rui Zhang, Yuning Shen

et al.

Nature Communications, Journal Year: 2023, Volume and Issue: 14(1)

Published: July 3, 2023

High-throughput experimentation (HTE) is an increasingly important tool in reaction discovery. While the hardware for running HTE chemical laboratory has evolved significantly recent years, there remains a need software solutions to navigate data-rich experiments. Here we have developed phactor™, that facilitates performance and analysis of laboratory. phactor™ allows experimentalists rapidly design arrays reactions or direct-to-biology experiments 24, 96, 384, 1,536 wellplates. Users can access online reagent data, such as inventory, virtually populate wells with produce instructions perform array manually, assistance liquid handling robot. After completion array, analytical results be uploaded facile evaluation, guide next series All metadata, are stored machine-readable formats readily translatable various software. We also demonstrate use discovery several chemistries, including identification low micromolar inhibitor SARS-CoV-2 main protease. Furthermore, been made available free academic 24- 96-well via interface.

Language: Английский

Citations

30

AI for organic and polymer synthesis DOI

Hong Xin,

Qi Yang, Kuangbiao Liao

et al.

Science China Chemistry, Journal Year: 2024, Volume and Issue: 67(8), P. 2461 - 2496

Published: June 26, 2024

Language: Английский

Citations

11

Deciphering Photoinduced Catalytic Reaction Mechanisms in Natural and Artificial Photosynthetic Systems on Multiple Temporal and Spatial Scales Using X-ray Probes DOI
Lin X. Chen, Junko Yano

Chemical Reviews, Journal Year: 2024, Volume and Issue: 124(9), P. 5421 - 5469

Published: April 25, 2024

Utilization of renewable energies for catalytically generating value-added chemicals is highly desirable in this era rising energy demands and climate change impacts. Artificial photosynthetic systems or photocatalysts utilize light to convert abundant CO2, H2O, O2 fuels, such as carbohydrates hydrogen, thus converting storable chemical resources. The emergence intense X-ray pulses from synchrotrons, ultrafast free electron lasers, table-top laser-driven sources over the past decades opens new frontiers deciphering photoinduced catalytic reaction mechanisms on multiple temporal spatial scales. Operando spectroscopic methods offer a set electronic transitions probing oxidation states, coordinating geometry, spin states metal center photosensitizers with unprecedented time resolution. scattering enable previously elusive steps be characterized different length scales methodological progress their application examples collected review will glimpse into accomplishments current state both natural synthetic systems. Looking forward, there are still many challenges opportunities at frontier research that require further advancement characterization techniques.

Language: Английский

Citations

10

Large Language Models for Inorganic Synthesis Predictions DOI
Seong-Min Kim, Yousung Jung, Joshua Schrier

et al.

Journal of the American Chemical Society, Journal Year: 2024, Volume and Issue: 146(29), P. 19654 - 19659

Published: July 11, 2024

We evaluate the effectiveness of pretrained and fine-tuned large language models (LLMs) for predicting synthesizability inorganic compounds selection precursors needed to perform synthesis. The predictions LLMs are comparable to─and sometimes better than─recent bespoke machine learning these tasks but require only minimal user expertise, cost, time develop. Therefore, this strategy can serve both as an effective strong baseline future studies various chemical applications a practical tool experimental chemists.

Language: Английский

Citations

9

Calculating the Precision of Student-Generated Datasets Using RStudio DOI
Joseph Chiarelli, Melissa A. St. Hilaire, Brandi L. Baldock

et al.

Journal of Chemical Education, Journal Year: 2025, Volume and Issue: unknown

Published: Jan. 24, 2025

Language: Английский

Citations

1