Adversarial interspecies relationships facilitate population suppression by gene drive in spatially explicit models DOI
Yiran Liu, WeiJian Teo, Haochen Yang

et al.

Ecology Letters, Journal Year: 2023, Volume and Issue: 26(7), P. 1174 - 1185

Published: May 10, 2023

Suppression gene drives bias their inheritance to spread through a population, potentially eliminating it when they reach high frequency. CRISPR homing suppression have already seen success in the laboratory, but several models predict that may be elusive population with realistic spatial structure due extinction-recolonization cycles. Here, we extend our continuous space framework include two competing species or predator-prey pairs. We find both general and mosquito-specific models, predators can facilitate drive-based suppression, albeit at cost of an increased rate drive loss outcomes. These results are robust mosquito seasonal fluctuations. Our study illustrates difficulty predicting outcomes complex ecosystems. However, promising for prospects less powerful successfully eliminate target other pest populations.

Language: Английский

The CRISPR-Cas toolbox and gene editing technologies DOI Creative Commons

Guanwen Liu,

Qiupeng Lin, Shuai Jin

et al.

Molecular Cell, Journal Year: 2021, Volume and Issue: 82(2), P. 333 - 347

Published: Dec. 29, 2021

Language: Английский

Citations

260

How genomics can help biodiversity conservation DOI Creative Commons
Kathrin Theißinger, Carlos Fernandes, Giulio Formenti

et al.

Trends in Genetics, Journal Year: 2023, Volume and Issue: 39(7), P. 545 - 559

Published: Feb. 16, 2023

The availability of public genomic resources can greatly assist biodiversity assessment, conservation, and restoration efforts by providing evidence for scientifically informed management decisions. Here we survey the main approaches applications in conservation genomics, considering practical factors, such as cost, time, prerequisite skills, current shortcomings applications. Most perform best combination with reference genomes from target species or closely related species. We review case studies to illustrate how facilitate research across tree life. conclude that time is ripe view fundamental integrate their use a practice genomics.

Language: Английский

Citations

185

Past, present, and future of CRISPR genome editing technologies DOI Creative Commons

Martin Pacesa,

Oana Pelea, Martin Jínek

et al.

Cell, Journal Year: 2024, Volume and Issue: 187(5), P. 1076 - 1100

Published: Feb. 1, 2024

Genome editing has been a transformative force in the life sciences and human medicine, offering unprecedented opportunities to dissect complex biological processes treat underlying causes of many genetic diseases. CRISPR-based technologies, with their remarkable efficiency easy programmability, stand at forefront this revolution. In Review, we discuss current state CRISPR gene technologies both research therapy, highlighting limitations that constrain them technological innovations have developed recent years address them. Additionally, examine summarize landscape applications context health therapeutics. Finally, outline potential future developments could shape coming years.

Language: Английский

Citations

126

CRISPR/Cas9-based split homing gene drive targeting doublesex for population suppression of the global fruit pest Drosophila suzukii DOI Creative Commons
Amarish Kumar Yadav, Cole Butler, Akihiko Yamamoto

et al.

Proceedings of the National Academy of Sciences, Journal Year: 2023, Volume and Issue: 120(25)

Published: June 12, 2023

Genetic-based methods offer environmentally friendly species-specific approaches for control of insect pests. One method, CRISPR homing gene drive that target genes essential development, could provide very efficient and cost-effective control. While significant progress has been made in developing drives mosquito disease vectors, little with agricultural Here, we report the development evaluation split doublesex (dsx) Drosophila suzukii, an invasive pest soft-skinned fruits. The component, consisting dsx single guide RNA DsRed genes, was introduced into female-specific exon dsx, which is function females but not males. However, most strains, hemizygous were sterile produced male transcript. With a modified included optimal splice acceptor site, from each four independent lines fertile. High transmission rates (94 to 99%) observed line expressed Cas9 two nuclear localization sequences D. suzukii nanos promoter. Mutant alleles small in-frame deletions near cut site functional thus would resistance drive. Finally, mathematical modeling showed strains be used suppression lab cage populations repeated releases at relatively low release ratios (1:4). Our results indicate potentially effective means populations.

Language: Английский

Citations

48

Reversing insecticide resistance with allelic-drive in Drosophila melanogaster DOI Creative Commons
Bhagyashree Kaduskar, Raja Babu Singh Kushwah, Ankush Auradkar

et al.

Nature Communications, Journal Year: 2022, Volume and Issue: 13(1)

Published: Jan. 12, 2022

Abstract A recurring target-site mutation identified in various pests and disease vectors alters the voltage gated sodium channel ( vgsc ) gene (often referred to as knockdown resistance or kdr confer commonly used insecticides, pyrethroids DDT. The ubiquity of mutations poses a major global threat continued use insecticides means for vector control. In this study, we generate common isogenic laboratory Drosophila strains using CRISPR/Cas9 editing. We identify differential sensitivities permethrin DDT versus deltamethrin among these mutants well contrasting physiological consequences two different mutations. Importantly, apply CRISPR-based allelic-drive replace resistant with susceptible wild-type counterpart population cages. This successful proof-of-principle opens-up numerous possibilities including targeted reversion insecticide-resistant populations native state replacement malaria transmitting mosquitoes those bearing naturally occurring parasite alleles.

Language: Английский

Citations

45

Generating prophylactic immunity against arboviruses in vertebrates and invertebrates DOI
Daniel J. Rawle, Leon E. Hugo, Abigail L. Cox

et al.

Nature reviews. Immunology, Journal Year: 2024, Volume and Issue: 24(9), P. 621 - 636

Published: April 3, 2024

Language: Английский

Citations

11

Germline Cas9 promoters with improved performance for homing gene drive DOI Creative Commons
Jie Du, Weizhe Chen,

Xihua Jia

et al.

Nature Communications, Journal Year: 2024, Volume and Issue: 15(1)

Published: May 29, 2024

Abstract Gene drive systems could be a viable strategy to prevent pathogen transmission or suppress vector populations by propagating alleles with super-Mendelian inheritance. CRISPR-based homing gene drives convert wild type into in heterozygotes Cas9 and gRNA. It is thus desirable identify promoters that yield high conversion rates, minimize the formation rate of resistance both germline early embryo, limit somatic expression. In Drosophila , nanos promoter avoids leaky expression, but at cost embryo from maternally deposited Cas9. To improve efficiency, we test eleven melanogaster promoters. Some achieve higher efficiency minimal resistance, none completely avoid However, such expression often does not carry detectable fitness costs for rescue targeting haplolethal gene, suggesting conversion. Supporting 4-gRNA suppression drive, one leads low equilibrium frequency due other outperforms resulting successful cage population. Overall, these hold advantages species may possess valuable homologs organisms.

Language: Английский

Citations

10

Overriding Mendelian inheritance in Arabidopsis with a CRISPR toxin–antidote gene drive that impairs pollen germination DOI
Y. Liu, Bingke Jiao, Jackson Champer

et al.

Nature Plants, Journal Year: 2024, Volume and Issue: 10(6), P. 910 - 922

Published: June 17, 2024

Language: Английский

Citations

9

A synthetic differentiation circuit in Escherichia coli for suppressing mutant takeover DOI Creative Commons
David S. Glass,

Anat Bren,

Elizabeth Vaisbourd

et al.

Cell, Journal Year: 2024, Volume and Issue: 187(4), P. 931 - 944.e12

Published: Feb. 1, 2024

Differentiation is crucial for multicellularity. However, it inherently susceptible to mutant cells that fail differentiate. These mutants outcompete normal by excessive self-renewal. It remains unclear what mechanisms can resist such expansion. Here, we demonstrate a solution engineering synthetic differentiation circuit in Escherichia coli selects against these via biphasic fitness strategy. The provides tunable production of analogs stem, progenitor, and differentiated cells. resists mutations coupling the an essential enzyme, thereby disadvantaging non-differentiating mutants. selected maintained positive rate long-term evolution. Surprisingly, this remained constant across vast changes growth conditions. We found transit-amplifying (fast-growing progenitors) underlie environmental robustness. Our results provide insight into stability powerful method evolutionarily stable multicellular consortia.

Language: Английский

Citations

8

Role of mutation G255A in modulating pyrethroid sensitivity in insect sodium channels DOI
Kaiyang Liu, Likui Wang,

S.X. Wen

et al.

International Journal of Biological Macromolecules, Journal Year: 2025, Volume and Issue: 295, P. 139455 - 139455

Published: Jan. 7, 2025

Language: Английский

Citations

1