BMC Microbiology,
Journal Year:
2025,
Volume and Issue:
25(1)
Published: April 16, 2025
Abstract
Background
The
bacterial
second
messenger
c-di-GMP
is
known
to
influence
the
formation
of
biofilms
and
thereby
persistence
pathogenic
beneficial
bacteria
in
hosts.
A
previous
evolution
experiment
with
Pseudomonas
lurida
MYb11,
occasional
symbiont
nematode
Caenorhabditis
elegans
,
led
emergence
host-specialized
variants
elevated
intracellular
c-di-GMP.
Thus
far,
molecular
underpinnings
c-di-GMP-mediated
host
specialization
were
unknown
this
symbiosis.
Therefore,
current
study
aimed
at
identifying
candidate
processes
by
combining
transcriptomic
functional
genetic
analyses.
Results
We
found
that
MYb11
specialists
differentially
expressed
genes
related
attachment,
motility
biofilm
production,
including
pelD
from
pel
gene
cluster.
deletion
resulted
reduced
intra-host
competitive
fitness,
lower
numbers
C.
loss
biomass.
Conclusion
Our
results
identify
as
a
previously
key
modulator
symbiont-host
associations
acts
downstream
Science,
Journal Year:
2024,
Volume and Issue:
385(6706)
Published: July 18, 2024
Many
species,
including
humans,
host
communities
of
symbiotic
microbes.
There
is
a
vast
literature
on
the
ways
these
microbiomes
affect
hosts,
but
here
we
argue
for
an
increased
focus
how
hosts
their
microbiomes.
Hosts
exert
control
over
symbionts
through
diverse
mechanisms,
immunity,
barrier
function,
physiological
homeostasis,
and
transit.
These
mechanisms
enable
to
shape
ecology
evolution
generate
natural
selection
microbial
traits
that
benefit
host.
Our
result
from
perpetual
tension
between
symbiont
evolution,
can
leverage
host's
evolved
abilities
regulate
microbiota
prevent
treat
disease.
The
study
will
be
central
our
ability
both
understand
manipulate
microbiotas
better
health.
Annual Review of Microbiology,
Journal Year:
2022,
Volume and Issue:
76(1), P. 349 - 367
Published: June 2, 2022
A
huge
number
of
bacterial
species
are
motile
by
flagella,
which
allow
them
to
actively
move
toward
favorable
environments
and
away
from
hazardous
areas
conquer
new
habitats.
The
general
perception
flagellum-mediated
movement
chemotaxis
is
dominated
the
Escherichia
coli
paradigm,
with
its
peritrichous
flagellation
famous
run-and-tumble
navigation
pattern,
has
shaped
view
on
how
bacteria
swim
navigate
in
chemical
gradients.
However,
a
significant
amount-more
likely
majority-of
exhibit
(bi)polar
flagellar
localization
pattern
instead
lateral
flagella.
Accordingly,
these
have
evolved
very
different
mechanisms
for
chemotaxis.
Here,
we
review
earlier
recent
findings
various
modes
motility
mediated
polar
Current Opinion in Microbiology,
Journal Year:
2024,
Volume and Issue:
80, P. 102496 - 102496
Published: June 13, 2024
Symbiotic
interactions
between
fungi
and
bacteria
range
from
positive
to
negative.
They
are
ubiquitous
in
free-living
as
well
host-associated
microbial
communities
worldwide.
Yet,
the
impact
of
fungal-bacterial
symbioses
on
organization
dynamics
is
uncertain.
There
two
reasons
for
this
uncertainty:
(1)
knowledge
gaps
understanding
genetic
mechanisms
underpinning
(2)
prevailing
interpretations
ecological
theory
that
favor
antagonistic
drivers
stabilizing
biological
despite
existence
models
emphasizing
contributions
interactions.
This
review
synthesizes
information
common
soil
polymicrobial
biofilms.
The
interdomain
partnerships
considered
context
relevant
community
ecology
models,
which
discussed
critically.
Aquaculture Reports,
Journal Year:
2023,
Volume and Issue:
31, P. 101648 - 101648
Published: July 7, 2023
In
aquatic
animals,
microbial
communities
associated
with
the
host
exert
powerful
influences
on
physiology,
reproduction,
nutrient
metabolism,
and
phenotypic
traits,
as
well
complex
behaviors.
This
relationship
between
microbes
suggests
that
host-microbiota
interactions
might
have
influenced
host's
genetic
variation.
To
improve
our
understanding
of
how
hosts
interact
produce
phenotypes,
it
is
necessary
to
focus
animal
traits
a
basis
understand
potential
roles
for
microbiome
in
shaping
phenotypes.
Here,
we
review
literatures
environmental
effects
intestinal
community
structure,
corresponding
microbiomes
phenotypes
breeding.
provides
better
gut
microbiota
establishes
connection
factors,
while
modulating
affect
differentiation.
A
more
detailed
contribute
determining
role
field
breeding
animals.
BMC Microbiology,
Journal Year:
2023,
Volume and Issue:
23(1)
Published: May 9, 2023
Abstract
Background
Circadian
rhythms,
observed
across
all
domains
of
life,
enable
organisms
to
anticipate
and
prepare
for
diel
changes
in
environmental
conditions.
In
bacteria,
a
circadian
clock
mechanism
has
only
been
characterized
cyanobacteria
date.
These
clocks
regulate
cyclical
patterns
gene
expression
metabolism
which
contribute
the
success
their
natural
environments.
The
potential
impact
self-generated
rhythms
other
bacterial
microbial
populations
motivated
extensive
research
identify
novel
clocks.
Main
text
Daily
oscillations
community
composition
function
have
ocean
ecosystems
symbioses.
are
influenced
by
abiotic
factors
such
as
light
availability
nutrients.
some
marine
symbioses,
largely
controlled
light-dark
cycles.
gut
systems,
influx
nutrients
after
host
feeding
drastically
alters
microbiota.
Conversely,
microbiota
can
influence
rhythm
variety
mechanisms
including
through
interacting
with
immune
system.
intricate
complex
relationship
between
makes
it
challenging
disentangle
behaviors
from
that
might
govern
daily
these
populations.
Conclusions
While
ability
would
likely
be
enhanced
self-sustained
rhythm,
more
evidence
further
studies
needed
confirm
whether
host-associated
heterotrophic
bacteria
possess
systems.
addition,
respond
cycles
conditions
yet
uncovered.
mSystems,
Journal Year:
2024,
Volume and Issue:
9(2)
Published: Jan. 31, 2024
Studying
host–microbiota
interactions
through
the
perspective
of
hologenome
is
gaining
interest
across
all
life
sciences.
Intestinal
parasite
infections
are
a
huge
burden
on
human
and
animal
health;
however,
there
few
studies
investigating
role
during
infections.
We
address
this
gap
in
largest
multi-omics
fish
microbiota
study
to
date
using
natural
cestode
infection
farmed
Atlantic
salmon.
find
clear
association
between
infection,
salmon
lifetime
growth,
perturbation
gut
microbiota.
Furthermore,
we
provide
first
evidence
that
genetic
background
host
may
partly
determine
how
changes
parasite-associated
dysbiosis.
Our
therefore
highlights
value
hologenomic
approach
for
more
in-depth
understanding
parasitism.
Journal of Bacteriology,
Journal Year:
2024,
Volume and Issue:
206(5)
Published: May 2, 2024
ABSTRACT
Vibrio
(
Aliivibrio
)
fischeri
’s
initial
rise
to
fame
derived
from
its
alluring
production
of
blue-green
light.
Subsequent
studies
probe
the
mechanisms
underlying
this
bioluminescence
helped
field
discover
phenomenon
now
known
as
quorum
sensing.
Orthologs
quorum-sensing
regulators
(i.e.,
LuxR
and
LuxI)
originally
identified
in
V.
were
subsequently
uncovered
a
plethora
bacterial
species,
analogous
pathways
found
yet
others.
Over
past
three
decades,
study
microbe
has
greatly
expanded
unique
role
exclusive
symbiont
light
organ
Hawaiian
bobtail
squid,
Euprymna
scolopes
.
Buoyed
by
optically
amenable
host
persistent
insightful
researchers
who
have
applied
novel
cross-disciplinary
approaches,
developed
into
robust
model
for
microbe-host
associations.
It
contributed
our
understanding
how
bacteria
experience
respond
specific,
often
fluxing
environmental
conditions
which
impact
development
their
host.
also
deepened
numerous
microbial
processes
such
motility
chemotaxis,
biofilm
formation
dispersal,
competition,
relevance
specific
genes
context
colonizing
an
animal
Parallels
these
between
studied
pathogens
are
readily
apparent,
demonstrating
functional
conservation
across
diverse
associations
permitting
reinterpretation
“pathogenesis.”
Collectively,
advances
built
foundation
microbiome
positioned
continue
expand
frontiers
world
inside
animals.