bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Dec. 22, 2024
Abstract
Understanding
the
complex
architecture
and
functions
of
neural
circuits
is
central
to
unraveling
mechanisms
multisensory
integration.
In
this
study,
we
analyzed
structural
properties
Drosophila
adult
brain
infer
community
structures
within
pathways.
We
adopt
a
network
embedding
method
developed
by
ourselves,
Bidirectional
Heterogeneous
Graph
Neural
Network
with
Random
Teleport
(BHGNN-RT),
designed
generate
vector
representations
neurons
in
directed,
heterogeneous
connectome.
This
approach
takes
advantage
both
connectivity
heterogeneity
features,
enabling
effective
clustering
revealing
hierarchical
architectures
olfactory
broader
systems.
applied
BHGNN-RT
fly
connectome
examine
connectivity-based
organization
major
neuronal
classes
along
pathways,
distinct
groups
unique
patterns
antennal
lobe,
lateral
horn,
mushroom
body,
other
regions.
Further
analysis
showed
how
different
contribute
integration
sensory
information
also
investigated
bilateral
symmetry
pathway,
shedding
light
on
signals
are
processed
ipsilateral
contralateral
connections
ensure
robust
perception.
Our
findings
demonstrate
utility
graph
representation
learning
analyzing
The
insights
gained
from
provide
deeper
understanding
comprehension
underlying
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Dec. 8, 2024
Connectomes
are
network
maps
of
synaptic
connectivity.
A
key
functional
role
any
connectome
is
to
constrain
inter-neuronal
signaling
and
sculpt
the
flow
activity
across
nervous
system.
therefore
play
a
central
in
rapid
tranmission
information
about
an
organism’s
environment
from
sensory
neurons
higher-order
for
action
planning
ultimately
effectors.
Here,
we
use
parsimonious
model
spread
investigate
connectome’s
shaping
putative
cascades.
Our
allows
us
simulate
pathways
sensors
rest
brain,
mapping
similarity
these
between
different
modalities
identifying
convergence
zones–neurons
that
activated
simultaneously
by
modalities.
Further,
considered
two
multisensory
integration
scenarios
–
cooperative
case
where
interacted
“speed
up”
(reduce)
neurons’
activation
times
competitive
“winner
take
all”
case,
streams
vied
same
neural
territory.
Finally,
data-driven
algorithm
partition
into
classes
based
on
their
behavior
during
cascade
simulations.
work
helps
underscore
“simple”
models
enriching
data,
while
offering
classification
joint
connectional/dynamical
properties.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Nov. 3, 2023
A
long-standing
goal
of
neuroscience
is
to
obtain
a
causal
model
the
nervous
system.
This
would
allow
neuroscientists
explain
animal
behavior
in
terms
dynamic
interactions
between
neurons.
The
recently
reported
whole-brain
fly
connectome
[1-7]
specifies
synaptic
paths
by
which
neurons
can
affect
each
other
but
not
whether,
or
how,
they
do
vivo.
To
overcome
this
limitation,
we
introduce
novel
combined
experimental
and
statistical
strategy
for
efficiently
learning
brain,
refer
as
"effectome".
Specifically,
propose
an
estimator
dynamical
systems
brain
that
uses
stochastic
optogenetic
perturbation
data
accurately
estimate
effects
prior
drastically
improve
estimation
efficiency.
We
then
analyze
circuits
have
greatest
total
effect
on
dynamics
discover
that,
fortunately,
dominant
significantly
involve
only
relatively
small
populations
neurons-thus
imaging,
stimulation,
neuronal
identification
are
feasible.
Intriguingly,
find
approach
also
re-discovers
known
generates
testable
hypotheses
about
their
dynamics.
Overall,
our
analyses
provide
evidence
global
generated
large
collection
often
anatomically
localized
operating,
largely,
independently
other.
turn
implies
principal
neuroscience,
be
feasibly
obtained
fly.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Oct. 26, 2024
Abstract
Understanding
how
neural
circuits
integrate
sensory
and
state
information
to
support
context-dependent
behavior
is
a
central
issue
in
neuroscience.
In
Drosophila,
oviposition
complex
process
which
the
fly
integrates
context
choose
an
optimal
location
lay
her
eggs.
The
circuit
that
controls
sequence
known,
but
multiple
modalities
internal
states
not.
We
investigated
circuitry
underlying
high-level
processing
related
using
Hemibrain
connectome.
identified
Oviposition
Inhibitory
Neuron
(oviIN)
as
key
hub
analyzed
its
inputs
uncover
potential
parallel
pathways
may
be
responsible
for
computations
decision-making.
applied
graph-theoretic
analyses
on
sub-connectome
of
oviIN
identify
modules
neurons
constitute
novel
circuits.
Our
findings
indicate
form
from
unstructured
neuropils
Superior
Protocerebrum
where
have
been
known
occur.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Dec. 22, 2024
Abstract
Understanding
the
complex
architecture
and
functions
of
neural
circuits
is
central
to
unraveling
mechanisms
multisensory
integration.
In
this
study,
we
analyzed
structural
properties
Drosophila
adult
brain
infer
community
structures
within
pathways.
We
adopt
a
network
embedding
method
developed
by
ourselves,
Bidirectional
Heterogeneous
Graph
Neural
Network
with
Random
Teleport
(BHGNN-RT),
designed
generate
vector
representations
neurons
in
directed,
heterogeneous
connectome.
This
approach
takes
advantage
both
connectivity
heterogeneity
features,
enabling
effective
clustering
revealing
hierarchical
architectures
olfactory
broader
systems.
applied
BHGNN-RT
fly
connectome
examine
connectivity-based
organization
major
neuronal
classes
along
pathways,
distinct
groups
unique
patterns
antennal
lobe,
lateral
horn,
mushroom
body,
other
regions.
Further
analysis
showed
how
different
contribute
integration
sensory
information
also
investigated
bilateral
symmetry
pathway,
shedding
light
on
signals
are
processed
ipsilateral
contralateral
connections
ensure
robust
perception.
Our
findings
demonstrate
utility
graph
representation
learning
analyzing
The
insights
gained
from
provide
deeper
understanding
comprehension
underlying