Genetic correlations between Alzheimer’s disease and gut microbiome genera DOI Creative Commons
Davis Cammann, Yimei Lu,

Melika J. Cummings

et al.

Scientific Reports, Journal Year: 2023, Volume and Issue: 13(1)

Published: March 31, 2023

Abstract A growing body of evidence suggests that dysbiosis the human gut microbiota is associated with neurodegenerative diseases like Alzheimer’s disease (AD) via neuroinflammatory processes across microbiota-gut-brain axis. The affects brain health through secretion toxins and short-chain fatty acids, which modulates permeability numerous immune functions. Observational studies indicate AD patients have reduced microbiome diversity, could contribute to pathogenesis disease. Uncovering genetic basis microbial abundance its effect on suggest lifestyle changes may reduce an individual’s risk for Using largest genome-wide association study genera from MiBioGen consortium, we used polygenic score (PRS) analyses “best-fit” model implemented in PRSice-2 determined correlation between 119 a discovery sample (ADc12 case/control: 1278/1293). To confirm results sample, next repeated PRS analysis replication (GenADA 799/778) then performed meta-analysis both samples. Finally, conducted linear regression assess PRSs significant APOE genotypes. In 20 were initially identified as genetically case/control status. Of these 20, three ( Eubacterium fissicatena protective factor , Collinsella, Veillonella factor) independently sample. Meta-analysis samples confirmed ten had AD, four significantly rs429358 allele direction consistent their protective/risk designation association. Notably, proinflammatory genus was positively correlated Overall, host factors influencing are suggesting serve biomarkers targets treatment intervention. Our highlight might promote development interaction . Larger datasets functional required understand causal relationships.

Language: Английский

Association between gut microbiota and preeclampsia-eclampsia: a two-sample Mendelian randomization study DOI Creative Commons
Pengsheng Li, Haiyan Wang, Lan Guo

et al.

BMC Medicine, Journal Year: 2022, Volume and Issue: 20(1)

Published: Nov. 15, 2022

Abstract Background Several recent observational studies have reported that gut microbiota composition is associated with preeclampsia. However, the causal effect of on preeclampsia-eclampsia unknown. Methods A two-sample Mendelian randomization study was performed using summary statistics from largest available genome-wide association meta-analysis ( n =13,266) conducted by MiBioGen consortium. The were obtained FinnGen consortium R7 release data (5731 cases and 160,670 controls). Inverse variance weighted, maximum likelihood, MR-Egger, weighted median, model, MR-PRESSO, cML-MA used to examine between preeclampsia-eclampsia. Reverse analysis bacteria found be causally in forward analysis. Cochran’s Q quantify heterogeneity instrumental variables. Results estimates suggested Bifidobacterium had a protective (odds ratio = 0.76, 95% confidence interval: 0.64–0.89, P 8.03 × 10 −4 ). In addition, Collinsella 0.77, 0.60–0.98, 0.03), Enterorhabdus 0.62–0.93, 8.76 −3 ), Eubacterium (ventriosum group) 0.63–0.91, 2.43 Lachnospiraceae (NK4A136 0.65–0.92, 3.77 Tyzzerella 3 0.85, 0.74–0.97, 0.01) presented suggestive According results reverse MR analysis, no significant microbiota. No variables or horizontal pleiotropy found. Conclusions This Further randomized controlled trials are needed clarify probiotics their specific mechanisms.

Language: Английский

Citations

412

Microbiome and cancer DOI Creative Commons
Nyssa Cullin, Camila Azevedo Antunes, Ravid Straussman

et al.

Cancer Cell, Journal Year: 2021, Volume and Issue: 39(10), P. 1317 - 1341

Published: Sept. 9, 2021

Language: Английский

Citations

362

Effect of host genetics on the gut microbiome in 7,738 participants of the Dutch Microbiome Project DOI
Esteban A. Lopera-Maya, Alexander Kurilshikov, Adriaan van der Graaf

et al.

Nature Genetics, Journal Year: 2022, Volume and Issue: 54(2), P. 143 - 151

Published: Feb. 1, 2022

Language: Английский

Citations

317

Combined effects of host genetics and diet on human gut microbiota and incident disease in a single population cohort DOI Open Access
Youwen Qin, Aki S. Havulinna, Yang Liu

et al.

Nature Genetics, Journal Year: 2022, Volume and Issue: 54(2), P. 134 - 142

Published: Feb. 1, 2022

Language: Английский

Citations

317

Non-alcoholic fatty liver disease: the interplay between metabolism, microbes and immunity DOI
Herbert Tilg, Timon E. Adolph, Michael Dudek

et al.

Nature Metabolism, Journal Year: 2021, Volume and Issue: 3(12), P. 1596 - 1607

Published: Dec. 20, 2021

Language: Английский

Citations

303

Causal relationship between gut microbiota and cancers: a two-sample Mendelian randomisation study DOI Creative Commons

Yiwen Long,

Lanhua Tang,

Yangying Zhou

et al.

BMC Medicine, Journal Year: 2023, Volume and Issue: 21(1)

Published: Feb. 21, 2023

Abstract Background Evidence from observational studies and clinical trials suggests that the gut microbiota is associated with cancer. However, causal association between cancer remains to be determined. Methods We first identified two sets of based on phylum, class, order, family, genus level information, data were obtained IEU Open GWAS project. then performed two-sample Mendelian randomisation (MR) determine whether causally eight types. Furthermore, we a bi-directional MR analysis examine direction relations. Results 11 relationships genetic liability in microbiome cancer, including those involving Bifidobacterium . found 17 strong associations Moreover, 24 using multiple datasets. Conclusions Our revealed was cancers may useful providing new insights for further mechanistic microbiota-mediated

Language: Английский

Citations

260

Gut microbiome-wide association study of depressive symptoms DOI Creative Commons

Djawad Radjabzadeh,

Jos A. Bosch, André G. Uitterlinden

et al.

Nature Communications, Journal Year: 2022, Volume and Issue: 13(1)

Published: Dec. 6, 2022

Depression is one of the most poorly understood diseases due to its elusive pathogenesis. There an urgency identify molecular and biological mechanisms underlying depression gut microbiome a novel area interest. Here we investigate relation fecal diversity composition with depressive symptoms in 1,054 participants from Rotterdam Study cohort validate these findings Amsterdam HELIUS 1,539 subjects. We association thirteen microbial taxa, including genera Eggerthella, Subdoligranulum, Coprococcus, Sellimonas, Lachnoclostridium, Hungatella, Ruminococcaceae (UCG002, UCG003 UCG005), LachnospiraceaeUCG001, Eubacterium ventriosum Ruminococcusgauvreauiigroup, family symptoms. These bacteria are known be involved synthesis glutamate, butyrate, serotonin gamma amino butyric acid (GABA), which key neurotransmitters for depression. Our study suggests that may play role

Language: Английский

Citations

242

Causal Relationship Between Gut Microbiota and Autoimmune Diseases: A Two-Sample Mendelian Randomization Study DOI Creative Commons
Qian Xu, Jing‐Jing Ni,

Bai‐Xue Han

et al.

Frontiers in Immunology, Journal Year: 2022, Volume and Issue: 12

Published: Jan. 24, 2022

Growing evidence has shown that alterations in gut microbiota composition are associated with multiple autoimmune diseases (ADs). However, it is unclear whether these associations reflect a causal relationship.

Language: Английский

Citations

216

Gut microbiome heritability is nearly universal but environmentally contingent DOI
Laura Grieneisen, Mauna Dasari, Trevor J. Gould

et al.

Science, Journal Year: 2021, Volume and Issue: 373(6551), P. 181 - 186

Published: July 9, 2021

Baboons inform on human gut microbiota Commensal bacteria are found throughout an organism, but it is not known whether associations between and their host heritable. Grieneisen et al. examined changes in the microbiomes of 585 wild baboons from fecal samples collected over 14 years (see Perspective by Cortes-Ortiz Amato). Almost all microbiome traits tested demonstrated some level statistically significant heritability. Most heritability values were low varied time correlating with age host. live environment similar to that postulated for early humans have a humans. Thus, this may reflect genetic determinants humans, which datasets available. Science , aba5483, issue p. 181 ; see also abj5287, 159

Language: Английский

Citations

191

Gut microbiota in COVID-19: key microbial changes, potential mechanisms and clinical applications DOI Open Access
Fen Zhang, Raphaela Iris Lau, Qin Liu

et al.

Nature Reviews Gastroenterology & Hepatology, Journal Year: 2022, Volume and Issue: 20(5), P. 323 - 337

Published: Oct. 21, 2022

Language: Английский

Citations

188