Single-Molecule Oxidoreductase Activity Analysis for Activity-Based Diagnosis Based on Proteoform Alterations
Mayano Minoda,
No information about this author
Junpei Hatakeyama,
No information about this author
N Nagano
No information about this author
et al.
Journal of the American Chemical Society,
Journal Year:
2025,
Volume and Issue:
unknown
Published: Jan. 6, 2025
We
developed
a
single-molecule
enzyme
activity
assay
platform
for
NAD(P)+-dependent
oxidoreductases,
leveraging
new
NAD(P)H-responsive
fluorogenic
probe
optimized
microdevice-based
fluorometric
detection.
This
enabled
the
detection
of
activities
in
blood
and
cerebrospinal
fluid
(CSF),
including
lactate
dehydrogenase,
glucose-6-phosphate
hexokinases.
demonstrate
its
potential
activity-based
diagnosis
by
detecting
altered
populations
species
CSF
from
liver
damage
brain
tumor
patients.
Language: Английский
Synthetic Protein-to-DNA Input Exchange for Protease Activity Detection Using CRISPR-Cas12a
Luca Capelli,
No information about this author
Federica Pedrini,
No information about this author
Andrea C. Di Pede
No information about this author
et al.
Analytical Chemistry,
Journal Year:
2024,
Volume and Issue:
96(47), P. 18645 - 18654
Published: Nov. 14, 2024
We
present
a
novel
activity-based
detection
strategy
for
matrix
metalloproteinase
2
(MMP2),
critical
cancer
protease
biomarker,
leveraging
mechanism
responsive
to
the
proteolytic
activity
of
MMP2
and
its
integration
with
CRISPR-Cas12a-assisted
signal
amplification.
designed
chemical
translator
comprising
two
functional
units─a
peptide
nucleic
acid
(PNA),
fused
together.
The
presents
substrate
MMP2,
while
PNA
serves
as
output
subsequent
processing.
This
was
immobilized
on
micrometer
magnetic
beads
physical
support
an
assay.
incorporated
into
our
design
single-stranded
DNA
partially
hybridized
sequence
bearing
region
complementary
RNA
guide
CRISPR-Cas12a.
target-induced
nuclease
Cas12a
results
in
degradation
FRET-labeled
reporters
amplified
fluorescence
signal,
enabling
low
picomolar
range,
showing
limit
72
pg/mL.
study
provides
new
principles
broader
applicability
CRISPR-Cas-based
biosensing.
Language: Английский
Thioester‐Based Coupled Fluorogenic Assays in Microdevice for the Detection of Single‐Molecule Enzyme Activities of Esterases with Specified Substrate Recognition
T. Ukegawa,
No information about this author
Toru Komatsu,
No information about this author
Mayano Minoda
No information about this author
et al.
Advanced Science,
Journal Year:
2023,
Volume and Issue:
11(10)
Published: Dec. 22, 2023
Abstract
Single‐molecule
enzyme
activity
assay
is
a
platform
that
enables
the
analysis
of
activities
at
single
proteoform
level.
The
limitation
targetable
enzymes
major
drawback
assay,
but
general
reported
to
study
single‐molecule
esterases
based
on
coupled
using
thioesters
as
substrate
analogues.
realized
by
developing
highly
water‐soluble
thiol‐reacting
probes
phosphonate‐substituted
boron
dipyrromethene
(BODIPY).
system
detection
cholinesterase
in
blood
samples
level,
and
it
shown
dissecting
alterations
esterase
can
serve
an
informative
for
activity‐based
diagnosis.
Language: Английский
Synthetic Protein-to-DNA Input Exchange for Protease Activity Detection Using CRISPR-Cas12a
Published: Nov. 17, 2023
We
present
a
novel
activity-based
detection
strategy
for
matrix
metalloproteinase
2
(MMP2),
critical
cancer
protease
biomarker,
leveraging
mechanism
responsive
to
the
proteolytic
activity
of
MMP2
and
its
integration
with
CRISPR-Cas12a-assisted
signal
amplification.
designed
chemical
translator
comprising
two
functional
units
—
peptide
nucleic
acid
(PNA)
fused
together.
The
presents
substrate
MMP2,
while
PNA
serves
as
output
subsequent
processing.
This
was
immobilized
on
micrometric
magnetic
beads
physical
support
an
assay.
incorporated
into
our
design
single-stranded
DNA
partially
hybridized
sequence
bearing
region
complementary
RNA
guide
CRISPR-Cas12a.
target-induced
nuclease
Cas12a
results
in
degradation
FRET-labeled
reporters
amplified
fluorescence
signal,
enabling
low
picomolar
range,
showing
limit
72
pg/mL.
study
provides
new
principles
broader
applicability
CRISPR-Cas-based
biosensing.
Language: Английский
Synthetic Protein-to-DNA Input Exchange for Protease Activity Detection Using CRISPR-Cas12a
Luca Capelli,
No information about this author
Federica Pedrini,
No information about this author
Andrea C. Di Pede
No information about this author
et al.
Published: Nov. 29, 2023
We
present
a
novel
activity-based
detection
strategy
for
matrix
metalloproteinase
2
(MMP2),
critical
cancer
protease
biomarker,
leveraging
mechanism
responsive
to
the
proteolytic
activity
of
MMP2
and
its
integration
with
CRISPR-Cas12a-assisted
signal
amplification.
designed
chemical
translator
comprising
two
functional
units
—
peptide
nucleic
acid
(PNA)
fused
together.
The
presents
substrate
MMP2,
while
PNA
serves
as
output
subsequent
processing.
This
was
immobilized
on
micrometric
magnetic
beads
physical
support
an
assay.
incorporated
into
our
design
single-stranded
DNA
partially
hybridized
sequence
bearing
region
complementary
RNA
guide
CRISPR-Cas12a.
target-induced
nuclease
Cas12a
results
in
degradation
FRET-labeled
reporters
amplified
fluorescence
signal,
enabling
low
picomolar
range,
showing
limit
72
pg/mL.
study
provides
new
principles
broader
applicability
CRISPR-Cas-based
biosensing.
Language: Английский
Exploring fluoropolymers for fabrication of femtoliter chamber arrays used in digital bioanalysis
Jun Ando,
No information about this author
Kazue Murai,
No information about this author
Makiko Mori
No information about this author
et al.
Scientific Reports,
Journal Year:
2024,
Volume and Issue:
14(1)
Published: May 20, 2024
The
global
supply
of
fluoropolymers
and
fluorinated
solvents
is
decreasing
due
to
environmental
concerns
regarding
polyfluoroalkyl
substances.
CYTOP
has
been
used
for
decades
primarily
as
a
component
femtoliter
chamber
array
digital
bioanalysis;
however,
its
recently
become
scarce,
increasing
the
urgency
fabricating
using
alternative
materials.
In
this
study,
we
investigated
feasibility
four
types
in
stable
candidate
substitutes
verified
their
applicability
bioanalysis.
Among
these
candidates,
Fluorine
Sealant
emerged
viable
option
arrays
conventional
photolithography
process.
To
validate
efficacy,
performed
various
bioanalysis
FP-A-based
with
model
enzymes
such
CRISPR-Cas,
horseradish
peroxidase,
β-galactosidase.
results
demonstrated
similar
performance
that
CYTOP,
highlighting
broader
utility
FP-A
Our
findings
underscore
potential
enhance
versatility
foster
ongoing
advancement
innovative
diagnostic
technologies.
Language: Английский
Compact Digital Immunoassay Platform Integrating ELISA with a Lateral Flow Strip
Takuma Degawa,
No information about this author
Y Hori,
No information about this author
Masato Orikasa
No information about this author
et al.
Biomedicines,
Journal Year:
2024,
Volume and Issue:
12(11), P. 2517 - 2517
Published: Nov. 4, 2024
On-site
diagnosis
of
infection
in
their
early
stages
requires
assays
with
high
sensitivities
that
are
compact
and
easy
to
operate
out
the
laboratory
hospital
environments.
However,
current
assay
technologies
fall
short
these
requirements
require
highly
skilled
technicians
set
up,
operate,
interpret
results.
Language: Английский