Excipient Induced Unusual Phase Separation in Bovine Serum Albumin Solution: An Explicit Role Played by Ion-Hydration DOI
Indrani Bhattacharya,

Ria Saha,

Sumana Pyne

et al.

Langmuir, Journal Year: 2024, Volume and Issue: 40(49), P. 25822 - 25833

Published: Nov. 22, 2024

We report an instantaneous room-temperature phase separation of 1 mM bovine serum albumin solution in the presence (20% acetic acid+0.2 M NaCl), a routinely used food preservative; opaque liquid-like (L) coexists equilibrium with granular gel like (G). Interestingly, neither 20% acid nor 0.2 NaCl individually induces such separation. Field emission scanning electron microscopy (FESEM) and high-resolution transmission (HRTEM) imaging show aggregated proteins to be dispersed upper phase, while lower is composed cross-linked fibrils (hydrogels). Mid-IR FTIR, Raman scattering, circular dichroism (CD) experiments reveal significant increase β-sheet content BSA, which confirms formation amyloids excipient. Both L G phases undergo distinct visual microscopic changes upon incubation at 25 80 °C. It evident that added salt plays pivotal role bringing about this otherwise unique behavior. divulge explicit ion associated hydration using THz-FTIR measurements 1.5–16.7 THz (50–550 cm–1) frequency window. Systematic alteration ion-induced THz-active mode water envisions key ions shaping various phases. Our study depicts intriguing observation severe amyloidosis BSA addition preservative, even room temperature, expected add new insight into amyloid research. Considering increasing number individuals suffering from several neurodegenerative disorders (Alzheimer's, Parkinson's, type-2 diabetes, obesity, cancer, etc.), leads caution toward critically revisiting usage known preservatives.

Language: Английский

Entropy Tug-of-War Determines Solvent Effects in the Liquid–Liquid Phase Separation of a Globular Protein DOI Creative Commons
Saumyak Mukherjee, Sashary Ramos, Simone Pezzotti

et al.

The Journal of Physical Chemistry Letters, Journal Year: 2024, Volume and Issue: 15(15), P. 4047 - 4055

Published: April 5, 2024

Liquid–liquid phase separation (LLPS) plays a key role in the compartmentalization of cells via formation biomolecular condensates. Here, we combined atomistic molecular dynamics (MD) simulations and terahertz (THz) spectroscopy to determine solvent entropy contribution condensates human eye lens protein γD-Crystallin. The MD reveal an tug-of-war between water molecules that are released from droplets those retained within condensates, two categories were also assigned spectroscopically. A recently developed THz-calorimetry method enables quantitative comparison experimental computational changes molecules. strong correlation mutually validates approaches opens way detailed atomic-level understanding different driving forces underlying LLPS.

Language: Английский

Citations

11

Hydration makes a difference! How to tune protein complexes between liquid–liquid and liquid–solid phase separation DOI Creative Commons
Sashary Ramos, Janine Kamps, Simone Pezzotti

et al.

Physical Chemistry Chemical Physics, Journal Year: 2023, Volume and Issue: 25(41), P. 28063 - 28069

Published: Jan. 1, 2023

THz calorimetry can unravel the role of solvent in formation a protein condensate via liquid–liquid and liquid–solid phase separation.

Language: Английский

Citations

16

Real-time measure of solvation free energy changes upon liquid-liquid phase separation of α-elastin DOI

Benedikt König,

Simone Pezzotti, Sashary Ramos

et al.

Biophysical Journal, Journal Year: 2023, Volume and Issue: 123(11), P. 1367 - 1375

Published: July 28, 2023

Language: Английский

Citations

14

Bridging the Gap in Cryopreservation Mechanism: Unraveling the Interplay between Structure, Dynamics, and Thermodynamics in Cryoprotectant Aqueous Solutions DOI
Debasish Das Mahanta, Dennis Robinson Brown, Thomas Webber

et al.

The Journal of Physical Chemistry B, Journal Year: 2024, Volume and Issue: 128(15), P. 3720 - 3731

Published: April 8, 2024

Cryoprotectants play a crucial role in preserving biological material, ensuring their viability during storage and facilitating applications such as the conservation of medical compounds, tissues, organs for transplantation. However, precise mechanism by which cryoprotectants modulate thermodynamic properties water to impede formation growth ice crystals, thus preventing long-term damage, remains elusive. This is evident use empirically optimized recipes mixtures that typically contain DMSO, glycerol, various sugar constituents. Here, we terahertz calorimetry, Overhauser nuclear polarization, molecular dynamics simulations show DMSO exhibits robust structuring effect on around its methyl groups, reaching maximum at mole fraction XDMSO = 0.33. In contrast, glycerol exerts smaller water-structuring effect, even higher concentrations (Scheme 1). These results potentially suggest wrapped DMSO's group, can be evicted upon ligand binding, may render more surface-active cryoprotectant than while participate viscogen acts entire sample. findings shed light intricacies solvation behavior have significant implications optimizing cryopreservation protocols.

Language: Английский

Citations

4

Tuning biological processes via co-solutes: from single proteins to protein condensates – the case of α-elastin condensation DOI Creative Commons

Benedikt König,

Simone Pezzotti, Gerhard Schwaab

et al.

Chemical Science, Journal Year: 2025, Volume and Issue: unknown

Published: Jan. 1, 2025

Protein condensates as membrane-less compartments play a pivotal role in cellular processes. The stabilization of protein condensation can be tuned using cosolutes which directly impact biological function. In this study, we report the result rigorous study influence changes on hydration entropy and enthalpy upon condensate formation, by means THz-calorimetry. Our results unveil quantitative insights into fine tuning free energy imbalance, via hydrophobic/entropic hydrophilic/enthalpic cosolute-mediated or destabilization condensates. These shed new light regulatory potential co-solutes within cells, to tune Liquid-Liquid Phase Separation (LLPS). Furthermore, demonstrate transferability underlying molecular concepts cosolute addition two fundamental processes: folding denaturation. This provides blueprint for controlled modulating LLPS additions, with promising implications both medical applications.

Language: Английский

Citations

0

Volumetric properties of glycerol + N,N-dimethylacetamide mixtures at T = (278.15 to 333.15) K DOI
Gennadiy I. Egorov,

A. A. Kruglyakova,

М. А. Никитин

et al.

Journal of Molecular Liquids, Journal Year: 2025, Volume and Issue: unknown, P. 127224 - 127224

Published: Feb. 1, 2025

Language: Английский

Citations

0

Local Ordering and Mobility of Water–Glycerol Mixture Components in the Microporous Mordenite According to the Molecular Dynamics Simulation Data DOI
Andrei V. Egorov,

Maria I. Egorova,

Dmitry A. Mizyulin

et al.

Journal of Structural Chemistry, Journal Year: 2025, Volume and Issue: 66(3), P. 612 - 625

Published: March 1, 2025

Language: Английский

Citations

0

Active Microfluidic Mixing Using Photoacoustic Laser Streaming from Gold-Implanted Optical Fibers and Glass Beads DOI

Tian Tong,

Paththini Kuttige S. Nonis,

Chengzhen Qin

et al.

The Journal of Physical Chemistry C, Journal Year: 2025, Volume and Issue: unknown

Published: April 1, 2025

Language: Английский

Citations

0

Hydrothermal co-liquefaction of corn cob and Nannochloropsis sp. with Fe & Ni/Hβ catalyst: An examination on synergistic effect, products’ distribution and catalytic mechanism DOI
Long Han,

Xuejian Yin,

Zhifu Qi

et al.

Journal of Analytical and Applied Pyrolysis, Journal Year: 2025, Volume and Issue: unknown, P. 107146 - 107146

Published: April 1, 2025

Language: Английский

Citations

0

Hydration water drives the self-assembly of guanosine monophosphate DOI

Yu Heng Tao,

Simon Schulke,

Gerhard Schwaab

et al.

Biophysical Journal, Journal Year: 2024, Volume and Issue: 123(8), P. 931 - 939

Published: March 7, 2024

Language: Английский

Citations

2