Viruses,
Journal Year:
2024,
Volume and Issue:
16(11), P. 1686 - 1686
Published: Oct. 29, 2024
The
coronavirus
disease
2019
(COVID-19)
pandemic,
driven
by
the
emergence
of
severe
acute
respiratory
syndrome
2
(SARS-CoV-2),
has
been
characterized
virus's
ongoing
evolution,
leading
to
appearance
more
transmissible
variants
that
have
often
triggered
infection
surges.
In
this
study,
we
analyzed
SARS-CoV-2
epidemic
in
Cyprus,
utilizing
1627
viral
sequences
from
infected
individuals
between
November
2022
and
February
2024.
Over
period,
251
distinct
lineages
sublineages
were
identified,
predominantly
categorized
into
three
groups:
Omicron
5,
XBB,
JN.1
(parental
lineage
BA.2.86),
all
which
harbor
S
protein
mutations
linked
enhanced
transmissibility
immune
escape.
Despite
relatively
low
numbers
new
infections
during
lack
any
major
waves,
unlike
earlier
phases
these
demonstrated
varying
periods
dominance,
with
5
prevailing
2023,
XBB
March
generating
a
wavelet
December
2023
These
findings
suggest
Cyprus
reached
endemicity,
gradually
replacing
previously
circulating
irrespective
seasonal
patterns.
This
study
highlights
critical
importance
surveillance
evolution
emphasizes
role
preventive
measures
limiting
virus
transmission,
providing
valuable
insights
for
safeguarding
public
health.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2025,
Volume and Issue:
unknown
Published: Jan. 3, 2025
Abstract
Therapeutic
monoclonal
antibodies
(mAbs)
against
SARS-CoV-2
become
obsolete
as
spike
substitutions
reduce
antibody
binding.
To
induce
conserved
receptor-binding
domain
(RBD)
regions
for
protection
variants
of
concern
and
zoonotic
sarbecoviruses,
we
developed
mosaic-8b
RBD-nanoparticles
presenting
eight
sarbecovirus
RBDs
arranged
randomly
on
a
60-mer
nanoparticle.
Mosaic-8b
immunizations
protected
animals
from
challenges
viruses
whose
were
matched
or
mismatched
to
those
nanoparticles.
Here,
describe
neutralizing
mAbs
mosaic-8b–immunized
rabbits,
some
par
with
Pemgarda
(the
only
currently
FDA-approved
therapeutic
mAb).
Deep
mutational
scanning,
in
vitro
selection
resistance
mutations,
cryo-EM
structures
spike-antibody
complexes
demonstrated
targeting
epitopes.
Rabbit
included
critical
D-gene
segment
features
common
human
anti-RBD
mAbs,
despite
rabbit
genomes
lacking
an
equivalent
segment.
Thus,
mosaic
RBD-nanoparticle
immunization
coupled
multiplexed
screening
represent
efficient
way
generate
select
pan-sarbecovirus
pan-SARS-2
variant
mAbs.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2025,
Volume and Issue:
unknown
Published: Jan. 20, 2025
The
immune
response
to
viral
infection
is
shaped
by
past
exposures
related
virus
strains,
a
phenomenon
known
as
imprinting.
For
SARS-CoV-2,
much
of
the
population
has
been
imprinted
spike
from
an
early
strain,
either
through
vaccination
or
during
stages
COVID-19
pandemic.
As
consequence
this
imprinting,
with
more
recent
SARS-CoV-2
strains
primarily
boosts
cross-reactive
antibodies
elicited
imprinting
strain.
Here
we
compare
neutralizing
antibody
specificities
individuals
versus
infants
infected
Specifically,
use
pseudovirus-based
deep
mutational
scanning
measure
how
mutations
affect
neutralization
serum
adults
and
children
original
vaccine
primary
XBB*
variant.
While
activity
targets
receptor-binding
domain
(RBD),
only
mostly
N-terminal
(NTD).
In
these
infants,
secondary
exposure
via
shifts
towards
RBD,
although
specific
RBD
sites
targeted
are
different
than
for
adults.
dramatic
differences
in
among
histories
likely
impact
evolution.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2025,
Volume and Issue:
unknown
Published: Feb. 14, 2025
SARS-CoV-2
monoclonal
antibodies
remain
the
only
option
for
prevention
or
treatment
of
COVID-19
those
with
immunodeficiencies
drug
interactions
antiviral
agents.
Here,
we
assess
neutralizing
activity
authorized
antibody
pemivibart
and
candidate
SA55
against
major
historical
currently
dominant
viral
variants,
including
JN.1
subvariants
KP.3.1.1
XEC.
Our
findings
show
that
demonstrates
broad
potency
while
exhibits
reduced
variants.
Then
employ
replication-competent
vesicular
stomatitis
virus
spike
(rVSVΔG-JN.1)
to
select
escape
variants
SA55.
Following
this,
conduct
a
systematic
comparison
profiles
these
two
antibodies,
revealing
is
remarkably
resilient
mutations
under
selection,
which
consistent
our
SPR
data
indicating
possesses
substantially
stronger
binding
affinity.
Moreover,
an
immunobridging
analysis
suggests
may
have
superior
clinical
efficacy
in
preventing
infection
current
variant
landscape.
Together,
this
work
highlights
promise
as
potential
therapeutic
COVID-19,
especially
immunocompromised
populations.
Expert Review of Anti-infective Therapy,
Journal Year:
2025,
Volume and Issue:
unknown
Published: Feb. 25, 2025
The
success
in
the
COVID-19
pandemic
containment
largely
originated
from
vaccine-
and
infection-elicited
immunity,
with
SARS-CoV-2
infection
only
marginally
mitigated
by
availability
of
antiviral
drugs.
current
lack
effective
prophylactic
therapeutic
agents
immunocompromised
patients
highlights
need
for
a
radical
change
design
both
drug
manufacturing
clinical
trials.
In
this
review
authors
summarize
their
suggestions
manufacturers,
reviewing
classes
small
molecule
antivirals
passive
immunotherapies
highlighting
limitations
unexploited
potential.
Molecular
serological
testing
can
improve
appropriateness.
Efficacy
be
improved
combining
different
while
preserving
economical
sustainability.
Respiratory
delivery
should
better
investigated
Journal of Virology,
Journal Year:
2025,
Volume and Issue:
unknown
Published: March 25, 2025
ABSTRACT
The
immune
response
to
viral
infection
is
shaped
by
past
exposures
related
virus
strains,
a
phenomenon
known
as
imprinting.
For
severe
acute
respiratory
syndrome
coronavirus
2
(SARS-CoV-2),
much
of
the
population
has
been
imprinted
spike
from
an
early
strain,
either
through
vaccination
or
during
stages
COVID-19
pandemic.
As
consequence
this
imprinting,
with
more
recent
SARS-CoV-2
strains
primarily
boosts
cross-reactive
antibodies
elicited
imprinting
strain.
Here
we
compare
neutralizing
antibody
specificities
individuals
versus
infants
infected
Specifically,
use
pseudovirus-based
deep
mutational
scanning
measure
how
mutations
affect
neutralization
serum
adults
and
children
original
vaccine
primary
XBB*
variant.
While
activity
targets
receptor-binding
domain
(RBD),
only
mostly
N-terminal
domain.
In
these
infants,
secondary
exposure
via
shifts
toward
RBD,
although
specific
RBD
sites
targeted
are
different
adults.
dramatic
differences
in
among
histories
likely
impact
evolution.
IMPORTANCE
We
show
that
person’s
history
strongly
affects
which
regions
on
their
target.
particular,
who
have
just
once
strain
make
target
than
exposed
both
older
strains.
This
person-to-person
heterogeneity
means
same
mutation
can
impacts
immunity
people.
Journal of Clinical Medicine,
Journal Year:
2025,
Volume and Issue:
14(7), P. 2305 - 2305
Published: March 27, 2025
The
first
Polish
recommendations
for
the
management
of
COVID-19
were
published
by
Society
Epidemiologists
and
Infectiologists
(PTEiLChZ)
on
31
March
2020,
last
three
years
ago.
emergence
new
SARS-CoV-2
variants,
a
different
course
disease,
as
well
knowledge
about
therapies
vaccines,
requires
updating
diagnostic,
therapeutic,
prophylactic
guidelines.
Despite
reduction
in
threat
associated
with
COVID-19,
there
is
risk
another
epidemic
caused
coronaviruses,
which
was
an
additional
reason
developing
version
In
preparing
these
recommendations,
Delphi
method
used,
reaching
consensus
after
survey
cycles.
Compared
to
2022
version,
names
individual
stages
disease
have
been
changed,
adapting
them
realities
clinical
practice,
attention
paid
differences
observed
immunosuppressed
patients
children.
Some
previously
recommended
drugs
discontinued,
including
monoclonal
antibodies.
addition,
general
principles
vaccination
presented,
issues
related
post-COVID
syndrome.
Cell Reports,
Journal Year:
2025,
Volume and Issue:
44(4), P. 115543 - 115543
Published: April 1, 2025
Severe
acute
respiratory
syndrome
coronavirus
2
(SARS-CoV-2)
continues
to
evolve
and
spread,
it
remains
critical
understand
the
functional
consequences
of
mutations
in
dominant
viral
variants.
The
recombinant
JN.1
subvariant
XEC
recently
replaced
KP.3.1.1
become
most
prevalent
worldwide.
Here,
we
measure
vitro
neutralization
by
human
sera,
monoclonal
antibodies,
soluble
ACE2
(hACE2)
receptor
relative
parental
subvariants
KP.3
JN.1.
are
slightly
more
resistant
(1.3-
1.6-fold)
than
serum
antigenically
similar.
Both
also
demonstrate
greater
resistance
select
antibodies
hACE2,
all
which
target
top
spike.
Our
findings
suggest
that
upward
motion
receptor-binding
domain
spike
may
be
partially
hindered
N-terminal
XEC,
allowing
these
better
evade
up
position
have
a
growth
advantage.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Dec. 10, 2024
Summary
The
JN.1-sublineage
KP.3.1.1
recently
emerged
as
the
globally
prevalent
SARS-CoV-2
variant,
demonstrating
increased
infectivity
and
antibody
escape.
We
investigated
how
mutations
a
deletion
in
spike
protein
(S)
affect
ACE2
binding
Mass
spectrometry
revealed
new
glycan
site
at
residue
N30
altered
glycoforms
neighboring
N61.
Cryo-EM
structures
showed
that
rearrangement
of
adjacent
residues
did
not
significantly
change
overall
structure,
up-down
ratio
receptor-binding
domains
(RBDs),
or
binding.
Furthermore,
S
structure
with
hACE2
further
confirmed
an
epistatic
effect
between
F456L
Q493E
on
Our
analysis
shows
variants
after
late
2023
are
now
incorporating
reversions
to
found
other
sarbecoviruses,
including
glycan,
Q493E,
others.
Overall,
these
results
inform
structural
functional
consequences
mutations,
current
evolutionary
trajectory,
immune
evasion.