<p><strong>Reef
corals
depend
heavily
on
their
symbiotic
relationship
with
dinoflagellates
of
the
family
Symbiodiniaceae,
which
are
primary
source
metabolic
energy
and
hence
allow
them
to
survive
in
oligotrophic
tropical
seas.
The
between
these
two
partners
is
exceptionally
sensitive
environmental
change,
however,
global
warming
known
induce
dysbiosis
(i.e.,
breakdown
symbiosis)
a
process
referred
as
‘coral
bleaching’.
adaptive
bleaching
hypothesis
posits
that
host
may
acquire
new
dominant
Symbiodiniaceae
species
after
event,
either
from
shift
relative
abundance
resident
symbionts
(‘shuffling’)
or
uptake
environment
(‘switching’),
better
equipping
holobiont
whole
for
regime.
However,
different
symbiont
types
have
nutritional
implications
coral,
potentially
limiting
potential
partner
shuffling
switching.
Energy-rich
carbon
compounds
primarily
provided
by
coral
glucose,
glycerol,
lipids.
Yet,
it
poorly
understood
how
climate
change
impacts
this
translocation
identity
influences
response.
This
thesis,
therefore,
addressed
topic,
using
sea
anemone
Exaiptasia
diaphana
(‘Aiptasia’),
globally
adopted
model
system
study
cnidarian-dinoflagellate
symbiosis.</strong></p><p>First,
I
aimed
quantify
compare
pools
carbon-based
metabolites
under
thermal
stress
symbiont,
focusing
total
carbohydrates
(Chapter
2).
It
was
hypothesized
(33
°C)
would
cause
decline
various
metabolites,
likely
due
decreased
photosynthetic
function
host,
combined
elevated
catabolism
stress.
Metabolites
were
measured
range
commercially
available
metabolite-specific
assay
kits.
As
predicted,
at
high
temperature,
glucose
glycerol
remained
constant
even
increased
controls.
latter
observation
consistent
gluconeogenesis
synthesis
likes
glycerol)
response
demands
temperatures.
other
hand,
use
metabolite
an
osmolyte
moderator
cellular
While
test-kit
approach
used
here
associated
considerable
amount
inter-sample
variability,
nevertheless
confirmed
added
previous
observations
gained
much
more
expensive,
technically
complex
metabolomics
methods.</p><p>I
then
compared
photosynthates
Aiptasia
low,
control,
temperature
(15,
25,
33
oC),
when
colonized
Breviolum
minutum,
only
through
Indo-Pacific
region
(the
here),
Durusdinium
trenchii
psygmophilum
3).
D.
thermally
tolerant
but
opportunistic
not
typically
Aiptasia,
while
often
temperate
sub-tropical
species,
including
western
Atlantic
Ocean.
B.
minutum
translocate
photosynthate
its
control
out-perform
low
temperatures,
respectively.
To
test
this,
radiotracer
(NaH14CO3)
measure
fixation
translocation.
Contrary
expectations,
anemones
hosting
bleached
completely
both
population
density
controls,
containing
did
bleach
extensively
those
confirming
reputation
former
‘thermal
generalist.’
With
respect
metabolism,
performed
similarly
slightly
out-performed
across
all
though
most
benefit
temperature.
had
major
influence
flux
lessening
impact
bleaching.
Specifically,
facilitated
proportionally
higher
rates
symbiont-cell
specific
photosynthesis
translocation,
presumably
reduced
competition
CO2,
such
heat-stressed
continued
receive
similar
amounts
controls.</p><p>In
summary,
thesis
demonstrates
type
metabolism
symbiosis.
Most
interestingly,
my
findings
highlight
importance
research
processes
underlie
physiology
generalists
aid
adaptation
reef
natural
development
tools
conservation.</p>
mSystems,
Journal Year:
2023,
Volume and Issue:
8(6)
Published: Nov. 1, 2023
Symbiotic
microorganisms
are
crucial
for
the
survival
of
corals
and
their
resistance
to
coral
bleaching
in
face
climate
change.
However,
impact
microbe-microbe
interactions
on
functioning
is
mostly
unknown
but
could
be
essential
factors
adaption
future
climates.
Here,
we
investigated
between
cultured
dinoflagellates
Symbiodiniaceae
family,
photosymbionts
corals,
associated
bacteria.
By
assessing
genomic
potential
49
bacteria,
found
that
they
likely
beneficial
Symbiodiniaceae,
through
production
B
vitamins
antioxidants.
Additionally,
bacterial
genes
involved
host-symbiont
interactions,
such
as
secretion
systems,
accumulated
mutations
following
long-term
exposure
heat,
suggesting
symbiotic
may
change
under
This
highlights
importance
functioning.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Sept. 14, 2023
Abstract
Coral
microhabitats
are
colonized
by
a
myriad
of
microorganisms,
including
diverse
bacteria
which
essential
for
host
functioning
and
survival.
However,
the
location,
transmission,
functions
individual
bacterial
species
living
inside
coral
tissues
remain
poorly
studied.
Here,
we
show
that
previously
undescribed
symbiont
Pocillopora
acuta
forms
cell-associated
microbial
aggregates
(CAMAs)
within
mesenterial
filaments.
CAMAs
were
found
in
both
adults
larval
offspring,
providing
evidence
vertical
transmission.
In
situ
laser
capture
microdissection
followed
16S
rRNA
gene
metabarcoding
shotgun
metagenomics
produced
near
complete
metagenome-assembled
genome.
We
subsequently
cultured
CAMA
from
P.
colonies,
sequenced
assembled
their
genomes.
Phylogenetic
analyses
showed
belong
to
an
Endozoicomonadaceae
genus
species,
propose
name
Sororendozoicomonas
aggregata
gen.
nov
sp.
nov.
Metabolic
pathway
reconstruction
its
genome
sequence
suggests
this
can
synthesize
most
amino
acids,
several
B
vitamins,
antioxidants,
may
be
beneficial
hosts.
This
study
provides
detailed
insights
into
new
member
widespread
family,
thereby
improving
our
understanding
holobiont
functioning.
Vertically
transmitted,
tissue-associated
bacteria,
such
as
S.
key
candidates
development
microbiome
manipulation
approaches
with
long-term
positive
effects
on
host.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Aug. 4, 2023
Abstract
Corals
rely
on
a
wide
range
of
microorganisms
for
their
functioning,
including
intracellular
dinoflagellates
(Symbiodiniaceae)
and
bacteria.
Marine
heatwaves
trigger
the
loss
Symbiodiniaceae
from
coral
tissues
-
bleaching
often
leading
to
death.
While
coral-bacteria
interactions
are
widely
studied,
Symbiodiniaceae-bacteria
have
remained
largely
uninvestigated.
Here,
we
provide
genomic
analysis
49
bacteria,
spanning
16
genera,
that
closely
associate
with
six
cultured
species.
We
analyzed
bacterial
functional
potential
by
focusing
potentially
beneficial
functions
host,
B
vitamin
synthesis
antioxidant
abilities,
which
may
be
crucial
heat
tolerance
in
turn
resistance
thermal
bleaching.
These
analyses
suggest
scavenging
reactive
oxygen
species
(through
production
carotenoids
or
enzymes),
possibly
transfer
organic
carbon
host
cells.
Single
nucleotide
polymorphism
between
bacteria
isolated
wild-type
heat-evolved
cultures
revealed
exposure
long-term
elevated
temperature
has
resulted
mutations
genes
known
involved
host-symbiont
interactions,
such
as
secretion
systems.
Climate
change
therefore
modify
how
interact.
This
study
provides
an
overview
possible
roles
Symbiodiniaceae-associated
functioning
tolerance,
reinforcing
need
further
studies
fully
understand
biology
climate
resilience.
Importance
Symbiotic
survival
corals
face
change.
However,
impact
microbe-microbe
is
mostly
unknown,
but
could
essential
factors
adaption
future
climates.
investigated
family,
photosymbionts
corals,
associated
By
assessing
found
they
likely
Symbiodiniaceae,
through
vitamins
antioxidants.
Additionally,
systems,
accumulated
following
heat,
suggesting
symbiotic
under
highlights
importance
functioning.
<p><strong>Reef
corals
depend
heavily
on
their
symbiotic
relationship
with
dinoflagellates
of
the
family
Symbiodiniaceae,
which
are
primary
source
metabolic
energy
and
hence
allow
them
to
survive
in
oligotrophic
tropical
seas.
The
between
these
two
partners
is
exceptionally
sensitive
environmental
change,
however,
global
warming
known
induce
dysbiosis
(i.e.,
breakdown
symbiosis)
a
process
referred
as
‘coral
bleaching’.
adaptive
bleaching
hypothesis
posits
that
host
may
acquire
new
dominant
Symbiodiniaceae
species
after
event,
either
from
shift
relative
abundance
resident
symbionts
(‘shuffling’)
or
uptake
environment
(‘switching’),
better
equipping
holobiont
whole
for
regime.
However,
different
symbiont
types
have
nutritional
implications
coral,
potentially
limiting
potential
partner
shuffling
switching.
Energy-rich
carbon
compounds
primarily
provided
by
coral
glucose,
glycerol,
lipids.
Yet,
it
poorly
understood
how
climate
change
impacts
this
translocation
identity
influences
response.
This
thesis,
therefore,
addressed
topic,
using
sea
anemone
Exaiptasia
diaphana
(‘Aiptasia’),
globally
adopted
model
system
study
cnidarian-dinoflagellate
symbiosis.</strong></p><p>First,
I
aimed
quantify
compare
pools
carbon-based
metabolites
under
thermal
stress
symbiont,
focusing
total
carbohydrates
(Chapter
2).
It
was
hypothesized
(33
°C)
would
cause
decline
various
metabolites,
likely
due
decreased
photosynthetic
function
host,
combined
elevated
catabolism
stress.
Metabolites
were
measured
range
commercially
available
metabolite-specific
assay
kits.
As
predicted,
at
high
temperature,
glucose
glycerol
remained
constant
even
increased
controls.
latter
observation
consistent
gluconeogenesis
synthesis
likes
glycerol)
response
demands
temperatures.
other
hand,
use
metabolite
an
osmolyte
moderator
cellular
While
test-kit
approach
used
here
associated
considerable
amount
inter-sample
variability,
nevertheless
confirmed
added
previous
observations
gained
much
more
expensive,
technically
complex
metabolomics
methods.</p><p>I
then
compared
photosynthates
Aiptasia
low,
control,
temperature
(15,
25,
33
oC),
when
colonized
Breviolum
minutum,
only
through
Indo-Pacific
region
(the
here),
Durusdinium
trenchii
psygmophilum
3).
D.
thermally
tolerant
but
opportunistic
not
typically
Aiptasia,
while
often
temperate
sub-tropical
species,
including
western
Atlantic
Ocean.
B.
minutum
translocate
photosynthate
its
control
out-perform
low
temperatures,
respectively.
To
test
this,
radiotracer
(NaH14CO3)
measure
fixation
translocation.
Contrary
expectations,
anemones
hosting
bleached
completely
both
population
density
controls,
containing
did
bleach
extensively
those
confirming
reputation
former
‘thermal
generalist.’
With
respect
metabolism,
performed
similarly
slightly
out-performed
across
all
though
most
benefit
temperature.
had
major
influence
flux
lessening
impact
bleaching.
Specifically,
facilitated
proportionally
higher
rates
symbiont-cell
specific
photosynthesis
translocation,
presumably
reduced
competition
CO2,
such
heat-stressed
continued
receive
similar
amounts
controls.</p><p>In
summary,
thesis
demonstrates
type
metabolism
symbiosis.
Most
interestingly,
my
findings
highlight
importance
research
processes
underlie
physiology
generalists
aid
adaptation
reef
natural
development
tools
conservation.</p>