bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: June 23, 2023
Abstract
The
coexistence
of
multiple
bacterial
species
during
infection
can
have
significant
impacts
on
pathogenesis.
Pseudomonas
aeruginosa
and
Staphylococcus
aureus
are
opportunistic
pathogens
that
co-infect
hosts
cause
serious
illness.
factors
dictate
whether
one
will
outcompete
the
other
or
two
coexist
not
fully
understood.
We
investigated
role
surfactants
in
interactions
between
these
a
surface
enables
P.
to
swarm.
found
swarms
repelled
by
colonies
clinical
S.
isolates,
creating
physical
separation
strains.
This
effect
was
abolished
mutants
were
defective
production
phenol-soluble
modulins
(PSMs),
which
form
amyloid
fibrils
around
wild-type
colonies.
mechanism
establishes
using
Imaging
Reflected
Illuminated
Structures
(IRIS)
method,
tracks
flow
rhamnolipid
surfactant
layer
produced
.
PSMs
deflected
flow,
turn,
altered
direction
swarms.
These
findings
show
rhamnolipids
mediate
,
distinct
microenvironments.
Additionally,
we
Bacillus
subtilis
abiotic
hydrophobic
molecules
through
deflection.
Our
results
suggest
could
major
bacteria-bacteria
bacteria-host
relationships.
In
addition,
our
uncover
responsible
for
swarm
development
does
rely
sensing
but
instead
is
guided
largely
its
boundaries.
Inflammation and Regeneration,
Journal Year:
2024,
Volume and Issue:
44(1)
Published: March 1, 2024
Abstract
Background
Staphylococcus
aureus
is
a
leading
cause
of
human
bacterial
infections
worldwide.
It
the
most
common
causative
agent
skin
and
soft
tissue
infections,
can
also
various
other
including
pneumonia,
osteomyelitis,
as
well
life-threatening
such
sepsis
infective
endocarditis.
The
pathogen
asymptomatically
colonize
skin,
nasal
cavity,
intestine.
S.
colonizes
approximately
20–30%
nostrils,
being
an
opportunistic
for
subsequent
infection.
Its
strong
ability
to
silently
spread
via
contact
makes
it
difficult
eradicate
S
.
A
major
concern
with
its
capacity
develop
antibiotic
resistance
adapt
diverse
environmental
conditions.
variability
in
accessory
gene
regulator
(Agr)
region
genome
contributes
spectrum
phenotypes
within
population,
enhancing
likelihood
survival
different
environments.
Agr
functions
central
quorum
sensing
(QS)
system
,
allowing
bacteria
adjust
expression
response
population
density.
Depending
on
expression,
secretes
toxins,
contributing
virulence
infectious
diseases.
Paradoxically,
expressing
may
be
disadvantageous
certain
situations,
hospitals,
causing
generate
mutants
responsible
healthcare
settings.
Main
body
This
review
aims
demonstrate
molecular
mechanisms
governing
ranging
from
harmless
colonizer
organism
capable
infecting
organs.
Emphasis
will
placed
QS
role
orchestrating
behavior
across
contexts.
Short
conclusion
pathophysiology
infection
substantially
influenced
by
phenotypic
changes
resulting
factors
beyond
Agr.
Future
studies
are
expected
give
comprehensive
understanding
overall
profile
Biochemical Journal,
Journal Year:
2024,
Volume and Issue:
481(4), P. 245 - 263
Published: Feb. 15, 2024
Numerous
bacteria
naturally
occur
within
spatially
organised,
multicellular
communities
called
biofilms.
Moreover,
most
bacterial
infections
proceed
with
biofilm
formation,
posing
major
challenges
to
human
health.
Within
biofilms,
cells
are
embedded
in
a
primarily
self-produced
extracellular
matrix,
which
is
defining
feature
of
all
The
matrix
complex,
viscous
mixture
composed
polymeric
substances
such
as
polysaccharides,
filamentous
protein
fibres,
and
DNA.
structured
arrangement
the
bestows
beneficial
emergent
properties
that
not
displayed
by
planktonic
cells,
conferring
protection
against
physical
chemical
stresses,
including
antibiotic
treatment.
However,
lack
multi-scale
information
at
molecular
level
has
prevented
better
understanding
this
its
properties.
Here,
we
review
recent
progress
on
characterisation
components
their
three-dimensional
spatial
organisation
Nature Communications,
Journal Year:
2022,
Volume and Issue:
13(1)
Published: July 27, 2022
Abstract
The
amyloid-antimicrobial
link
hypothesis
is
based
on
antimicrobial
properties
found
in
human
amyloids
involved
neurodegenerative
and
systemic
diseases,
along
with
amyloidal
structural
peptides
(AMPs).
Supporting
this
hypothesis,
we
here
determined
the
fibril
structure
of
two
AMPs
from
amphibians,
uperin
3.5
aurein
3.3,
by
cryogenic
electron
microscopy
(cryo-EM),
revealing
amyloid
cross-β
fibrils
mated
β-sheets
at
atomic
resolution.
Uperin
formed
a
3-blade
symmetrical
propeller
nine
per
layer
including
tight
β-sheet
interfaces.
This
cryo-EM
complements
cross-α
conformation
previously
crystallography,
substantiating
secondary
switch
mechanism
3.5.
3.3
arrangement
consisted
six
layer,
all
showing
kinked
allowing
rounded
compactness
fibril.
are
similar
to
LARKS
(Low-complexity,
Amyloid-like,
Reversible,
Kinked
Segments)
functional
amyloids.
Advanced Materials,
Journal Year:
2024,
Volume and Issue:
unknown
Published: Nov. 12, 2024
Abstract
The
quest
to
understand
and
mimic
proton
translocation
mechanisms
in
natural
channels
has
driven
the
development
of
peptide‐based
artificial
facilitating
efficient
transport
across
nanometric
membranes.
It
is
demonstrated
here
that
hierarchical
peptide
self‐assembly
can
form
micrometers‐long
nanochannels.
fourfold
symmetrical
design
leverages
intermolecular
aromatic
interactions
align
self‐assembled
cyclic
nanotubes,
creating
hydrophilic
nanochannels
between
them.
Titratable
amino
acid
sidechains
are
positioned
adjacent
each
other
within
channels,
enabling
formation
hydrogen‐bonded
chains
upon
hydration,
transport.
Moreover,
these
enriched
with
protons
water
molecules
by
interacting
immobile
counter
ions
introduced
into
increasing
flow
density
rate.
This
system
maintains
transfer
rates
closely
resembling
those
protein
over
micrometer
distances.
functional
behavior
inherently
recyclable
biocompatible
systems
opens
door
for
their
exploitation
diverse
applications
energy
storage
conversion,
biomedicine,
bioelectronics.
ABSTRACT
Staphylococcus
aureus
secretes
phenol-soluble
modulins
(PSMs),
a
family
of
small,
amphipathic,
secreted
peptides
with
multiple
biologic
activities.
Community-acquired
S.
strains
produce
high
levels
PSMs
in
planktonic
cultures,
and
PSM
alpha
have
been
shown
to
augment
the
release
extracellular
membrane
vesicles
(MVs).
We
observed
that
amyloids,
aggregates
proteins
characterized
by
fibrillar
morphology
stained
specific
dyes,
co-purified
MVs
harvested
from
cell-free
culture
supernatants
community-acquired
strains.
δ-toxin
was
major
component
amyloid
fibrils
strain
LAC
MVs,
promoted
production
dose-dependent
manner.
To
determine
whether
were
generated
under
vivo
conditions,
we
inoculated
mice
cultures.
Bacterial
isolated
purified
lavage
fluids
recovered
infected
animals.
Although
most
abundant
fluids,
could
not
be
detected
these
samples.
Our
findings
expand
our
understanding
fibril
formation
reveal
important
roles
MV
biogenesis,
demonstrate
are
staphylococcal
infection
model.
IMPORTANCE
Extracellular
(MVs)
produced
cultures
encapsulate
diverse
cargo
bacterial
proteins,
nucleic
acids,
glycopolymers
protected
destruction
external
factors.
δ-toxin,
member
phenol
soluble
modulin
family,
critical
for
biogenesis.
Amyloid
virulent,
strains,
dependent
on
expression
gene
(
hld
).
Mass
spectrometry
data
confirmed
comprised
δ-toxin.
localized
murine
model,
setting.
provide
insights
into
factors
involved
biogenesis
formation.
Nature Communications,
Journal Year:
2023,
Volume and Issue:
14(1)
Published: Dec. 11, 2023
Abstract
Antibiotic
resistance
of
bacteria
is
considered
one
the
most
alarming
developments
in
modern
medicine.
While
varied
pathways
for
acquiring
antibiotic
have
been
identified,
there
still
are
open
questions
concerning
mechanisms
underlying
resistance.
Here,
we
show
that
alpha
phenol-soluble
modulins
(PSMαs),
functional
bacterial
amyloids
secreted
by
Staphylococcus
aureus
,
catalyze
hydrolysis
β-lactams,
a
prominent
class
compounds.
Specifically,
PSMα2
and,
particularly,
PSMα3
amide-like
bond
four
membered
β-lactam
ring
nitrocefin,
an
surrogate.
Examination
catalytic
activities
several
variants
allowed
mapping
active
sites
on
amyloid
fibrils’
surface,
specifically
underscoring
key
roles
cross-α
fibril
organization,
and
combined
electrostatic
nucleophilic
functions
lysine
arrays.
Molecular
dynamics
simulations
further
illuminate
structural
features
association
upon
surface.
Complementary
experimental
data
underscore
generality
amyloid-mediated
phenomenon,
demonstrating
clinically
employed
β-lactams
fibrils,
illustrating
degradation
actual
S.
biofilms
live
environments.
Overall,
this
study
unveils
as
agents
inducing
antibiotics,
possible
associated
with
biofilms.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2025,
Volume and Issue:
unknown
Published: Jan. 31, 2025
Abstract
Citropin
1.3
is
an
antimicrobial
peptide
produced
by
the
amphibian
Litoria
citropa
(Southern
bell
frog),
which
self-aggregates
into
distinct
fibrillar
structures,
however,
function
of
fibrils
remains
unclear
and
largely
unexplored.
In
this
study,
structural
functional
properties
citropin
were
investigated
using
cryogenic
electron
microscopy
fluorescence
in
presence
membrane
cell
models,
with
X-ray
crystallography.
Canonical
amyloids,
multilayered
nanotubes,
a
novel
mixed
fibril
observed.
Experiments
negatively
charged
giant
unilamellar
vesicles
revealed
that
facilitates
fusion
while
simultaneously
undergoing
phase
separation
phospholipids.
mammalian
cells,
permeabilizes
membranes,
leading
to
death,
over
time,
colocalizes
genetic
material.
Overall,
work
provides
new
insights
dynamics
amyloidogenic
its
interactions
different
systems.