bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Nov. 5, 2024
Abstract
Abnormal
increase
in
axonal
lysosome
abundance
is
associated
with
multiple
neurodegenerative
diseases
including
Alzheimer’s
disease.
However,
the
underlying
mechanisms
and
disease
relevance
are
not
fully
understood.
We
have
recently
identified
RH1115
as
a
small
molecule
modulator
of
autophagy-lysosomal
pathway
that
regulates
positioning
neurons.
This
allowed
us
to
manipulate
neuronal
distribution
axons
interrogate
its
contribution
both
optimal
functioning
pathology.
demonstrate
only
rescues
aberrant
buildup
autophagic
lysosomal
intermediates
but
also
reduces
secreted
Aβ42
levels
human
iPSC-derived
neurons
lacking
adaptor,
JIP3.
thus
restoring
efficient
transport
has
an
anti-amyloidogenic
effect
promising
therapeutic
strategy
for
Furthermore,
we
show
enhances
degradation,
requires
adaptor
JIP4
rescue
pathology
JIP3
KO
increases
JIP4-interacting
membrane
protein,
TMEM55B.
Lastly,
treatment
led
striking
locomotor
defects
zebrafish
larvae.
Thus,
which
can
be
impactful
determined
molecular
targets
modulating
abundance.
Science,
Journal Year:
2024,
Volume and Issue:
383(6690)
Published: March 28, 2024
Cytoplasmic
dynein
is
a
microtubule
motor
vital
for
cellular
organization
and
division.
It
functions
as
~4-megadalton
complex
containing
its
cofactor
dynactin
cargo-specific
coiled-coil
adaptor.
However,
how
recognize
diverse
adaptors,
they
interact
with
each
other
during
formation,
the
role
of
critical
regulators
such
lissencephaly-1
(LIS1)
protein
remain
unclear.
In
this
study,
we
determined
cryo–electron
microscopy
structure
dynein-dynactin
on
microtubules
LIS1
lysosomal
adaptor
JIP3.
This
reveals
molecular
basis
interactions
occurring
activation.
We
show
JIP3
activates
despite
atypical
architecture.
Unexpectedly,
binds
dynactin’s
p150
subunit,
tethering
it
along
length
dynein.
Our
data
suggest
that
constrain
to
ensure
efficient
formation.
The Journal of Cell Biology,
Journal Year:
2023,
Volume and Issue:
222(12)
Published: Nov. 1, 2023
Neuronal
autophagosomes
form
and
engulf
cargos
at
presynaptic
sites
in
the
axon
are
then
transported
to
soma
recycle
their
cargo.
Autophagic
vacuoles
(AVs)
mature
en
route
via
fusion
with
lysosomes
become
degradatively
competent
organelles;
transport
is
driven
by
microtubule
motor
protein
cytoplasmic
dynein,
activity
regulated
a
sequential
series
of
adaptors.
Using
lysate-based
single-molecule
motility
assays
live-cell
imaging
primary
neurons,
we
show
that
JNK-interacting
proteins
3
(JIP3)
4
(JIP4)
activating
adaptors
for
dynein
on
small
GTPases
ARF6
RAB10.
GTP-bound
promotes
formation
JIP3/4–dynein–dynactin
complex.
Either
knockdown
or
overexpression
RAB10
stalls
transport,
suggesting
this
GTPase
also
required
coordinate
opposing
activities
bound
kinesin
motors.
These
findings
highlight
complex
coordination
regulation
during
organelle
neurons.
Cell Reports,
Journal Year:
2023,
Volume and Issue:
42(5), P. 112448 - 112448
Published: May 1, 2023
Gain-of-function
mutations
in
the
LRRK2
gene
cause
Parkinson's
disease
(PD),
increasing
phosphorylation
of
RAB
GTPases
through
hyperactive
kinase
activity.
We
find
that
LRRK2-hyperphosphorylated
RABs
disrupt
axonal
transport
autophagosomes
by
perturbing
coordinated
regulation
cytoplasmic
dynein
and
kinesin.
In
iPSC-derived
human
neurons,
knockin
strongly
LRRK2-p.R1441H
mutation
causes
striking
impairments
autophagosome
transport,
inducing
frequent
directional
reversals
pauses.
Knockout
opposing
protein
phosphatase
1H
(PPM1H)
phenocopies
effect
LRRK2.
Overexpression
ADP-ribosylation
factor
6
(ARF6),
a
GTPase
acts
as
switch
for
selective
activation
or
kinesin,
attenuates
defects
both
p.R1441H
PPM1H
knockout
neurons.
Together,
these
findings
support
model
where
regulatory
imbalance
between
ARF6
induces
an
unproductive
"tug-of-war"
disrupting
processive
transport.
This
disruption
may
contribute
to
PD
pathogenesis
impairing
essential
homeostatic
functions
autophagy.
Nature Communications,
Journal Year:
2024,
Volume and Issue:
15(1)
Published: Jan. 31, 2024
Lysosomes
help
maintain
cellular
proteostasis,
and
defects
in
lysosomal
positioning
function
can
cause
disease,
including
neurodegenerative
disorders.
The
spatiotemporal
distribution
of
lysosomes
is
regulated
by
small
GTPases
Rabs,
which
are
activated
guanine
nucleotide
exchange
factors
(GEFs).
DENN
domain
proteins
the
largest
family
Rab
GEFs.
Using
a
cell-based
assay,
we
screened
DENND6A,
member
protein
against
all
known
Rabs
identified
it
as
potential
GEF
for
20
Rab34.
Here,
demonstrate
that
DENND6A
activates
Rab34,
recruits
RILP/dynein
complex
to
lysosomes,
promoting
lysosome
retrograde
transport.
Further,
identify
an
effector
Arl8b,
major
regulatory
GTPase
on
lysosomes.
We
Arl8b
peripheral
activate
Rab34
initiate
transport,
regulating
nutrient-dependent
juxtanuclear
repositioning.
Loss
impairs
autophagic
flux.
Our
findings
support
model
whereby
Arl8b/DENND6A/Rab34-dependent
trafficking
controls
autophagy.
Current Opinion in Cell Biology,
Journal Year:
2024,
Volume and Issue:
89, P. 102382 - 102382
Published: June 20, 2024
Lysosomes
are
central
to
the
maintenance
of
protein
and
organelle
homeostasis
in
cells.
Optimal
lysosome
function
is
particularly
critical
for
neurons
which
long-lived,
non-dividing
highly
polarized
with
specialized
compartments
such
as
axons
dendrites
distinct
architecture,
cargo,
turnover
requirements.
In
recent
years,
there
has
been
a
growing
appreciation
role
played
by
axonal
transport
regulating
neuronal
development,
its
functioning.
Perturbations
optimal
abundance
leading
either
strong
accumulations
or
dearth
lysosomes
both
linked
altered
health
this
review
we
highlight
how
two
regulators
abundance,
small
GTPase
Arl8
adaptor
JIP3,
aid
maintaining
alterations
their
levels
activity
could
contribute
neurodevelopmental
neurodegenerative
diseases.
Biochemistry,
Journal Year:
2025,
Volume and Issue:
unknown
Published: Feb. 5, 2025
A
dynamic
network
of
scaffolding
molecules,
adaptor
proteins,
and
motor
proteins
work
together
to
orchestrate
the
movement
mRNA,
vesicular
cargoes.
Defects
in
intracellular
transport
can
often
lead
neurodegeneration.
Huntingtin
(HTT)
is
a
ubiquitously
expressed
protein
with
multitude
cellular
roles,
including
regulating
various
organelles.
HTT
remarkable
its
ability
regulate
wide
range
cargoes,
BDNF
vesicles,
APP
early
endosomes,
autophagosomes,
lysosomes,
mitochondria.
This
interaction
allows
huntingtin
control
microtubule-based
by
kinesin
dynein,
as
well
actin-based
myosin
VI.
By
forming
complexes
multiple
adaptors,
regulates
variety
cargoes
guides
through
different
stages
biosynthesis,
signaling,
degradation.
Accordingly,
pathogenic
polyglutamine
expansions
seen
Huntington's
Disease
(HD)
dysregulate
complexes,
resulting
defects
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2025,
Volume and Issue:
unknown
Published: Feb. 6, 2025
ABSTRACT
MAPK8IP3-
related
neurodevelopmental
disorders
are
a
spectrum
of
rare
conditions
caused
by
de
novo
mutations
in
the
MAPK8IP3
gene
that
encodes
JIP3
protein.
These
associated
with
symptoms
manifest
children
and
cause
brain
abnormalities,
profound
intellectual
disabilities,
movement
disorders,
developmental
delays.
is
required
for
axonal
transport
proteins
organelles
between
soma
synaptic
terminal
neurons,
process
critical
normal
development
function.
Homozygous
loss-of-function
lead
to
impaired
aggregation
cargo,
which
result
swelling
stunted
elongation.
Despite
these
severe
outcomes,
disease
mechanisms
poorly
understood,
no
current
treatments
available.
Here
we
conduct
thorough
morphological,
behavioral,
motility
phenotyping
knockout
zebrafish
identify
locomotor
deficits
morphological
abnormalities.
To
treatment
options,
used
insights
from
expert
clinicians
artificial
intelligence
tool,
mediKanren,
drug
candidates
hypothesized
improve
patient
or
compensate
loss
at
molecular
level.
We
then
prioritized
drugs
FDA-approved,
safe
children,
readily
collective
efforts
identified
amantadine
levodopa
as
candidate
therapies
rescued
motor
phenotypes
zebrafish.
Life Science Alliance,
Journal Year:
2025,
Volume and Issue:
8(5), P. e202402934 - e202402934
Published: Feb. 28, 2025
CHMP2b
is
a
core
component
of
the
ESCRT
pathway
that
catalyzes
formation
multivesicular
bodies
for
endolysosomal
protein
degradation.
Although
mutation/loss-of-function
promotes
presynaptic
dysfunction
and
degeneration,
indicating
its
critical
role
in
homeostasis,
mechanisms
responsible
localization
recruitment
to
synapses
remain
unclear.
Here,
we
characterize
axonal
trafficking
show
transport
boutons,
as
well
cotransport
with
other
proteins,
are
regulated
by
neuronal
activity.
In
contrast,
frontotemporal
dementia–causative
intron5
mutation
exhibits
little
processive
movement
or
presence
absence
Instead,
vesicles
exhibit
oscillatory
behavior
reminiscent
tug-of-war
between
kinesin
dynein
motor
proteins.
We
this
phenotype
caused
deficient
binding
kinesin-binding
protein,
which
identify
key
regulator
transport.
These
findings
shed
light
on
synaptic
localization,
their
disruption
.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2025,
Volume and Issue:
unknown
Published: March 7, 2025
ABSTRACT
Monogenic
pediatric
neurodegenerative
disorders
can
reveal
fundamental
cellular
mechanisms
that
underlie
selective
neuronal
vulnerability.
TBCK-Encephaloneuronopathy
(TBCKE)
is
a
rare
autosomal
recessive
disorder
caused
by
stop-gain
variants
in
the
TBCK
gene.
Clinically,
patients
show
evidence
of
profound
neurodevelopmental
delays,
but
also
symptoms
progressive
encephalopathy
and
motor
neuron
disease.
Yet,
physiological
role
protein
remains
unclear.
We
report
human
TBCKE
model,
derived
from
iPSCs
homozygous
for
Boricua
variant
(p.R126X).
Using
unbiased
proteomic
analyses
neurons,
we
find
interacts
with
PPP1R21,
C12orf4,
Cryzl1,
consistent
being
part
FERRY
mRNA
transport
complex.
Loss
leads
to
depletion
C12ORF4
levels
across
multiple
cell
types,
suggesting
may
play
regulating
at
least
some
members
preferentially,
not
exclusively,
localizes
surface
endolysosomal
vesicles
colocalize
lysosomes.
Furthermore,
TBCK-deficient
neurons
have
reduced
content
axonal
compartment
relative
soma.
lysosomal
dynein/dynactin
adapter
JIP4,
which
functionally
exhibiting
striking
retrograde
trafficking
defects.
Hence,
our
work
reveals
mediate
mRNA,
particularly
along
lysosomes
compartments.
TBCK-deficiency
compartment-specific
defects
likely
contribute
preferential
susceptibility
neurodegeneration.