Nanoscale analysis of human G1 and metaphase chromatin in situ
The EMBO Journal,
Journal Year:
2025,
Volume and Issue:
unknown
Published: March 17, 2025
Language: Английский
Dynamics of microcompartment formation at the mitosis-to-G1 transition
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Sept. 16, 2024
As
cells
exit
mitosis
and
enter
G1,
mitotic
chromosomes
decompact
transcription
is
reestablished.
Previously,
Hi-C
studies
showed
that
essentially
all
interphase
3D
genome
features
including
A/B-compartments,
TADs,
CTCF
loops,
are
lost
during
mitosis.
However,
remains
insensitive
to
such
as
microcompartments,
nested
focal
interactions
between
cis
-regulatory
elements
(CREs).
We
therefore
applied
Region
Capture
Micro-C
from
G1.
Unexpectedly,
we
observe
microcompartments
in
prometaphase,
which
further
strengthen
ana/telophase
before
gradually
weakening
Loss
of
loop
extrusion
through
condensin
depletion
differentially
impacts
large
suggesting
they
partially
distinct.
Using
polymer
modeling,
show
microcompartment
formation
favored
by
chromatin
compaction
disfavored
activity,
explaining
why
likely
provides
a
particularly
favorable
environment.
Our
results
suggest
CREs
exhibit
intrinsic
homotypic
affinity
leading
formation,
may
explain
transient
transcriptional
spiking
observed
upon
exit.
Language: Английский
How condensed are mitotic chromosomes?
The Journal of Cell Biology,
Journal Year:
2024,
Volume and Issue:
223(11)
Published: Oct. 14, 2024
Chromosomes
undergo
dramatic
compaction
during
mitosis,
but
accurately
measuring
their
volume
has
been
challenging.
Employing
serial
block
face
scanning
electron
microscopy,
Cisneros-Soberanis
et
al.
(https://doi.org/10.1083/jcb.202403165)
report
that
mitotic
chromosomes
compact
to
a
nucleosome
concentration
of
∼760
µM.
Language: Английский