Ecotoxicology and Environmental Safety, Journal Year: 2025, Volume and Issue: 289, P. 117703 - 117703
Published: Jan. 1, 2025
Understanding the complex interactions of plants and soils in face global food security environmental degradation challenges is critical to future sustainable agriculture. This review discusses important link between soil health crop productivity by providing comprehensive assessment properties management methods. By examining physical, chemical, biological soil, it uncovers key limitations posed environment on growth. The highlights how texture, nutrient availability, moisture levels directly impact root growth, water uptake, use efficiencies, while also exploring diverse cropping systems enhance ecology biodiversity. utilizing state-of-the-art bioinformatics, we offer an in-depth exploration rhizosphere microbial communities, emphasizing functions phosphate-solubilizing nitrogen-fixing bacteria promoting vital cycles. potential using fertilizers increase resistance disease stress hold a major premise for sustainability In this regard, long-term impacts cultivation diversity, revealing intricate selection processes crops their partners shaping crop-soil-microbe interactions. terms management, practical strategies are proposed based testing, benefits organic farming conservation tillage health. Modern precision agricultural tools remote sensing technologies encouraged be refined effective management. At policy level, evaluate international guidelines aimed at fostering sustainability, suggesting new research pathways crop-soil dynamics offering approaches developing indicators challenges.
Language: Английский
Citations
6Unveiling the life of archaea in sediments: Diversity, metabolic potentials, and ecological roles
iMetaOmics., Journal Year: 2025, Volume and Issue: unknown
Published: Jan. 28, 2025
Abstract The domain Archaea was initially characterized as extremophiles upon its proposal. Recent significant discoveries have redrawn our views of archaeal biology, encompassing the identification mesophilic groups, expansion diversity and metabolic capabilities, elucidation evolutionary relationships among archaea, bacteria, eukaryotes. are ubiquitous constitute a substantial fraction microbial biomass within sediments. Therefore, comprehending their ecological roles is paramount for understanding contributions to global geochemical cycles. In this review, we summarize archaea across various sediment ecosystems, from terrestrial inland deep‐sea environments, utilizing representative genomes supported by Genome Taxonomy Database, which encompasses habitats such hot springs, salt lakes, freshwater rivers, mangroves, estuaries, coastal regions, seafloor sediments, cold seeps, hydrothermal vents. Furthermore, integrate analyses with recent studies highlight potentials, novel enzymatic functions, related carbon, nitrogen, sulfur cycles different lineages. Finally, discuss research hotspots achievements in studies, while projecting future exploration directions. expanding capacities broadened perspective on tree life underscored critical impacts ecosystems.
Language: Английский
Citations
0Microbial characteristics and CO2 diffuse emission in the Mt. Changbai volcanic field, northeast China
Journal of Asian Earth Sciences, Journal Year: 2025, Volume and Issue: unknown, P. 106513 - 106513
Published: Feb. 1, 2025
Language: Английский
Citations
0Inferring ancestral age and metabolic traits—Promises and challenges in the study of the evolution of ancient life
Science China Earth Sciences, Journal Year: 2025, Volume and Issue: unknown
Published: April 28, 2025
Language: Английский
Citations
0Response characteristics of soil microorganisms under strong disturbance conditions in the riparian zone of the three Gorges reservoir Area
Scientific Reports, Journal Year: 2024, Volume and Issue: 14(1)
Published: Aug. 8, 2024
The normal operation of the Three Gorges Reservoir, which involves periodic water storage and discharge, has led to strong disturbances in environmental conditions that alter soil microbial habitats riparian zones. Riparian zones are an important part controlling pollution Reservoir area, since they act as a final ecological barrier intercepts pollutants. Meanwhile, monitoring health communities zone is crucial for maintaining security reservoir area. We specifically investigate Daning River, tributaries have typical Soil samples from these areas were subjected high-throughput sequencing 16S rRNA genes 18S genes, order obtain characteristics present under studied distribution patterns their relationship with physicochemical properties. study results indicate exhibit high diversity evenness, spatial heterogeneity present. ASV dataset contains many sequences not assigned known genera, suggesting presence new fungal genera zone. Redundancy analysis (RDA) revealed pH
Language: Английский
Citations
2中山大学微生物学科的发展历程与展望
Scientia Sinica Vitae, Journal Year: 2024, Volume and Issue: unknown
Published: Aug. 7, 2024
Citations
0Arenosol Epieuric and Haplic Cambisol show a similar level of resilience of microbial communities when irrigated with treated wastewater in a temperate climate
Applied Soil Ecology, Journal Year: 2024, Volume and Issue: 204, P. 105693 - 105693
Published: Oct. 28, 2024
Language: Английский
Citations
0Navigating the archaeal frontier: insights and projections from bioinformatic pipelines
Frontiers in Microbiology, Journal Year: 2024, Volume and Issue: 15
Published: Sept. 23, 2024
Archaea continues to be one of the least investigated domains life, and in recent years, advent metagenomics has led discovery many new lineages at phylum level. For majority, only automatic genomic annotations can provide information regarding their metabolic potential role environment. Here, data from 2,978 archaeal genomes was used perform using bioinformatics tools, alongside synteny analysis. These classifications were done assess how good these different tools relation data. Our study revealed that even with lowered cutoffs, several functional models do not capture recently discovered diversity. Moreover, our investigation a significant portion genomes, approximately 42%, remain uncharacterized. In comparison, within 3,235 bacterial diverse range unclassified proteins is obtained, well-studied organisms like Escherichia coli having substantially lower proportion uncharacterized regions, ranging <5 25%, less studied being comparable archaea 35-40% regions. Leveraging this analysis, we able identify protein markers, thereby providing insights into metabolism dataset. findings underscore substantial gap between classification comprehensive mapping metabolism. Despite advances computational approaches, remains unexplored, highlighting need for extensive experimental validation domain, as well more refined annotation methods. This contributes better understanding underscores importance further research elucidating genomes.
Language: Английский
Citations
0canprot: Chemical Analysis of Proteins
Published: June 13, 2017
Language: Английский
Citations
0