Bronchoalveolar lavage single-cell transcriptomics reveals immune dysregulations driving COVID-19 severity
PLoS ONE,
Journal Year:
2025,
Volume and Issue:
20(2), P. e0309880 - e0309880
Published: Feb. 10, 2025
The
continuous
threats
posed
by
Severe
Acute
Respiratory
Syndrome
Coronavirus
2
(SARS-CoV-2),
the
virus
that
causes
COVID-19,
including
emergence
of
potentially
more
infectious
and
deadly
variants,
necessitate
ongoing
studies
to
uncover
novel
detailed
mechanisms
driving
disease
severity.
Using
single-cell
transcriptomics,
we
conducted
a
secondary
data
analysis
bronchoalveolar
lavage
fluid
(BALF)
from
COVID-19
patients
varying
severities
healthy
controls
comprehensively
examine
immune
responses.
We
observed
significant
cell
alterations
correlating
with
In
severe
cases,
macrophages
showed
upregulation
pro-inflammatory
genes
TNFα
IL1β,
contributing
inflammation
tissue
damage.
Neutrophils
exhibited
increased
activation,
marked
S100A8,
CXCL8,
IL1β
expression,
extended
viability
reduced
phagocytosis.
Genes
such
as
MCL1
HIF1α
supported
viability,
while
MSR1
MRC1
indicated
Enhanced
formation
neutrophil
extracellular
traps
(NETs)
clearance,
NET-associated
markers,
were
linked
thrombo-inflammation
organ
Both
neutrophils
in
cases
impaired
efferocytosis,
decreased
expression
TREM2
downregulation
FCGR3B
neutrophils,
leading
accumulation
apoptotic
cells
exacerbating
inflammation.
characterized
M1
high
milder
had
M2
elevated
PPARγ.
Dendritic
(DCs)
proportions
attenuated
MHC
class
I
(HLA-A,
HLA-B,
HLA-C)
co-stimulatory
molecules
(CD80,
CD86),
alongside
cytochrome
c
indicating
antigen
presentation
enhanced
apoptosis.
NK
T
demonstrated
altered
receptor
gene
activation
markers
IFNγ
ISG15,
suggesting
paradoxical
state
exhaustion.
This
highlights
critical
role
dysregulated
neutrophil,
macrophage,
dendritic
cell,
NK,
responses
identifying
potential
therapeutic
targets
providing
insights
into
disease.
Language: Английский
The influence of genetic polymorphisms on cytokine profiles in pediatric COVID-19: a pilot study
Frontiers in Pediatrics,
Journal Year:
2025,
Volume and Issue:
13
Published: Feb. 24, 2025
Recent
studies
have
underscored
the
importance
of
genetic
factors
in
predicting
COVID-19
susceptibility
and
severity.
While
cytokine
storms
are
crucial
disease
severity,
predisposition
significantly
influences
immune
responses.
Our
study
examined
genes
related
to
SARS-CoV-2
invasion
(ACE2
rs2074192)
interferon-induced
immunity
(IFNAR2
rs2236757,
TYK2
rs2304256,
OAS1
rs10774671,
OAS3
rs10735079).
Additionally,
we
investigated
linked
Kawasaki
(CD40
rs4813003,
FCGR2A
rs1801274,
CASP3
rs113420705)
that
play
roles
immunogenesis.
The
pilot
study,
which
involved
75
pediatric
patients
aged
one
month
17
years
[43
with
active
COVID-19,
children
multisystem
inflammatory
syndrome
(MIS-C),
15
healthy
controls],
was
conducted
Ternopil,
Ukraine.
Gene
polymorphism
studied
for
all
patients.
ELISA
kits
were
used
interleukin
studies,
including
Human
IL-1β
(Interleukin
1
Beta),
IL-6
6),
IL-8
8),
IL-12
12),
IFN-α
(Interferon
Alpha),
TNF-α
(Tumor
Necrosis
Factor
Alpha).
Statistical
analysis
performed
using
IBM
SPSS
Statistics
21
GraphPad
Prism
8.4.3.
identified
significant
gene-cytokine
associations
ACE2
rs2074192
T
allele
correlated
increased
IL-1β,
IL-6,
IL-8,
TNF-α.
IFNAR2
rs2236757
A
elevated
levels
low
levels,
while
rs10774671
carriers
also
exhibited
lower
levels.
prognostically
determining
infected
SARS-CoV-2.
gene
rs10735079
associated
changes
precisely
a
high
level.
CD40
rs4813003
C
had
higher
IL-12.
results
our
revealed
correlation
between
rs1801274
(A/G).
rs113420705
led
an
increase
IL-6.
These
findings
enhance
understanding
may
hold
promise
developing
targeted
interventions
providing
personalized
medical
approach
each
patient.
Language: Английский
Omics for searching plasma biomarkers associated with unfavorable COVID-19 progression in hypertensive patients
Alba Sánchez,
No information about this author
Graciano García‐Pardo,
No information about this author
Anna Martí
No information about this author
et al.
Scientific Reports,
Journal Year:
2025,
Volume and Issue:
15(1)
Published: March 25, 2025
Hypertension
is
one
of
the
most
common
risk
factors
for
COVID-19
clinical
progression.
The
identification
plasma
biomarkers
anticipating
worse
outcomes
and
to
better
understand
shared
mechanisms
between
hypertension
are
needed.
A
hypothesis-generating
study
was
designed
compare
proteomics
metabolomics
22
hypertensives
(HT)
41
non-hypertensives
(nHT)
patients
with
unfavorable
total
43
molecules
were
significantly
differed
HT
(n
=
22)
nHT
41).
Random
Forest
(RF)
analysis
identified
myo-inositol,
gelsolin
phosphatidylcholine
(PC)
32:1
as
top
distinguishing
nHT.
Plasma
myo-inositol
higher
(P
0.03
P
0.02,
respectively)
PC
lower
0.03)
in
compared
Biological
processes
like
stress
response
blood
coagulation,
along
KEGG
pathways
including
ascorbate
aldarate
metabolism
0.021)
linoleic
acid
0.028),
altered
hypertensive
There
a
clear
link
severe
COVID-19.
Key
biological
consider
improving
prognosis
quality
life
who
become
infected
SARS-CoV-2
include
oxidative
stress,
metabolism,
lipid
immune
system
inflammation.
Language: Английский
Immune Response Against SARS-CoV-2
Vaccines,
Journal Year:
2024,
Volume and Issue:
12(12), P. 1390 - 1390
Published: Dec. 11, 2024
The
immune
response
to
SARS-CoV-2
infection
is
highly
complex,
involving
a
dynamic
interplay
between
the
innate
and
adaptive
systems
[...].
Language: Английский