arXiv (Cornell University),
Journal Year:
2021,
Volume and Issue:
unknown
Published: May 14, 2021
Network
models
describe
the
brain
as
sets
of
nodes
and
edges
that
represent
its
distributed
organization.
So
far,
most
discoveries
in
network
neuroscience
have
prioritized
insights
highlight
distinct
groupings
specialized
functional
contributions
nodes.
Importantly,
these
are
determined
expressed
by
web
their
interrelationships,
formed
edges.
Here,
we
underscore
important
made
for
understanding
Different
types
different
relationships,
including
connectivity
similarity
among
Adopting
a
specific
definition
can
fundamentally
alter
how
analyze
interpret
network.
Furthermore,
associate
into
collectives
higher-order
arrangements,
time
series,
form
edge
communities
provide
topology
complementary
to
traditional
node-centric
perspective.
Focusing
on
edges,
or
dynamic
information
they
provide,
discloses
previously
underappreciated
aspects
structural
Proceedings of the National Academy of Sciences,
Journal Year:
2021,
Volume and Issue:
118(46)
Published: Nov. 8, 2021
The
topology
of
structural
brain
networks
shapes
dynamics,
including
the
correlation
structure
activity
(functional
connectivity)
as
estimated
from
functional
neuroimaging
data.
Empirical
studies
have
shown
that
connectivity
fluctuates
over
time,
exhibiting
patterns
vary
in
spatial
arrangement
correlations
among
segregated
systems.
Recently,
an
exact
decomposition
into
frame-wise
contributions
has
revealed
fine-scale
dynamics
are
punctuated
by
brief
and
intermittent
episodes
(events)
high-amplitude
cofluctuations
involving
large
sets
regions.
Their
origin
is
currently
unclear.
Here,
we
demonstrate
similar
readily
appear
silico
using
computational
simulations
whole-brain
dynamics.
As
empirical
data,
simulated
events
contribute
disproportionately
to
long-time
connectivity,
involve
recurrence
patterned
cofluctuations,
can
be
clustered
distinct
families.
Importantly,
comparison
event-related
underlying
reveals
modular
organization
present
coupling
matrix
cofluctuations.
Our
work
suggests
brief,
partly
shaped
connectivity.
Nature Communications,
Journal Year:
2022,
Volume and Issue:
13(1)
Published: May 16, 2022
Edge
time
series
are
increasingly
used
in
brain
imaging
to
study
the
node
functional
connectivity
(nFC)
dynamics
at
finest
temporal
resolution
while
avoiding
sliding
windows.
Here,
we
lay
mathematical
foundations
for
edge-centric
analysis
of
neuroimaging
series,
explaining
why
a
few
high-amplitude
cofluctuations
drive
nFC
across
datasets.
Our
exposition
also
constitutes
critique
existing
studies,
showing
that
their
main
findings
can
be
derived
from
under
static
null
hypothesis
disregards
correlations.
Testing
analytic
predictions
on
MRI
data
Human
Connectome
Project
confirms
explain
most
variation
edge
FC
matrix,
communities,
large
cofluctuations,
and
corresponding
spatial
patterns.
We
encourage
use
dynamic
measures
future
research,
which
exploit
structure
cannot
replicated
by
models.
Nature Communications,
Journal Year:
2022,
Volume and Issue:
13(1)
Published: Aug. 15, 2022
Abstract
In
the
absence
of
external
stimuli,
neural
activity
continuously
evolves
from
one
configuration
to
another.
Whether
these
transitions
or
explorations
follow
some
underlying
arrangement
lack
a
predictable
ordered
plan
remains
be
determined.
Here,
using
fMRI
data
highly
sampled
individuals
(~5
hours
resting-state
per
individual),
we
aimed
reveal
rules
that
govern
in
brain
at
rest.
Our
Topological
Data
Analysis
based
Mapper
approach
characterized
visited
transition
state
acts
as
switch
between
different
configurations
organize
spontaneous
activity.
Further,
while
was
by
uniform
representation
canonical
networks
(RSNs),
periphery
landscape
dominated
subject-specific
combination
RSNs.
Altogether,
revealed
principles
precision
dynamics
approach.
Frontiers in Systems Neuroscience,
Journal Year:
2022,
Volume and Issue:
15
Published: Jan. 21, 2022
In
this
theoretical
review,
we
begin
by
discussing
brains
and
minds
from
a
dynamical
systems
perspective,
then
go
on
to
describe
methods
for
characterizing
the
flexibility
of
dynamic
networks.
We
discuss
how
varying
degrees
kinds
may
be
adaptive
(or
maladaptive)
in
different
contexts,
specifically
focusing
measures
related
either
more
disjoint
or
cohesive
dynamics.
While
disjointed
useful
assessing
neural
entropy,
potentially
serve
as
proxy
self-organized
criticality
fundamental
property
enabling
behavior
complex
systems.
Particular
attention
is
given
recent
studies
which
have
been
used
investigate
neurological
cognitive
maturation,
well
breakdown
conscious
processing
under
levels
anesthesia.
further
these
findings
might
contextualized
within
Free
Energy
Principle
with
respect
fundamentals
brain
organization
biological
functioning
generally,
potential
methodological
advances
paradigm.
Finally,
relevance
computational
psychiatry,
propose
research
program
obtaining
better
understanding
ways
that
networks
relate
forms
psychological
flexibility,
single
most
important
factor
ensuring
human
flourishing.
Imaging Neuroscience,
Journal Year:
2023,
Volume and Issue:
1, P. 1 - 21
Published: Oct. 19, 2023
Abstract
Recent
studies
have
shown
that
functional
connectivity
can
be
decomposed
into
its
exact
frame-wise
contributions,
revealing
short-lived,
infrequent,
and
high-amplitude
time
points
referred
to
as
“events.”
Events
contribute
disproportionately
the
time-averaged
pattern,
improve
identifiability
brain-behavior
associations,
differences
in
their
expression
been
linked
endogenous
hormonal
fluctuations
autism.
Here,
we
explore
characteristics
of
events
while
subjects
watch
movies.
Using
two
independently-acquired
imaging
datasets
which
participants
passively
watched
movies,
find
synchronize
across
individuals
based
on
level
synchronization,
categorized
three
distinct
classes:
those
at
boundaries
between
during
do
not
all.
We
boundary
events,
compared
other
categories,
exhibit
greater
amplitude,
co-fluctuation
patterns,
temporal
propagation.
show
underlying
events1
is
a
specific
mode
involving
activation
control
salience
systems
alongside
deactivation
visual
systems.
movie,
hand,
display
pattern
time-locked
movie
stimulus.
Finally,
found
subjects’
time-varying
brain
networks
are
most
similar
one
another
these
synchronous
events.
Cell Reports,
Journal Year:
2021,
Volume and Issue:
37(7), P. 110032 - 110032
Published: Nov. 1, 2021
The
human
brain
is
composed
of
functionally
specialized
systems
that
support
cognition.
Recently,
we
proposed
an
edge-centric
model
for
detecting
overlapping
communities.
It
remains
unclear
how
these
communities
and
are
related.
Here,
address
this
question
using
data
from
the
Midnight
Scan
Club
show
all
linked
via
at
least
two
edge
We
then
examine
diversity
within
each
system,
finding
heteromodal
more
diverse
than
sensory
systems.
Next,
cluster
entire
cortex
to
reveal
it
according
regions'
edge-community
profiles.
find
regions
in
likely
form
their
own
clusters.
Finally,
personalized.
Our
work
reveals
pervasive
overlap
across
relationship
with
provides
pathways
future
research
networks.
NeuroImage,
Journal Year:
2021,
Volume and Issue:
243, P. 118518 - 118518
Published: Aug. 29, 2021
Null
models
are
useful
for
assessing
whether
a
dataset
exhibits
non-trivial
property
of
interest.
These
have
recently
gained
interest
in
the
neuroimaging
community
as
means
to
explore
dynamic
properties
functional
Magnetic
Resonance
Imaging
(fMRI)
time
series.
Interpretation
null-model
testing
this
context
may
not
be
straightforward
because
(i)
null
hypotheses
associated
different
sometimes
unclear
and
(ii)
fMRI
metrics
might
'trivial',
i.e.
preserved
under
hypothesis,
still
applications.
In
commentary,
we
review
several
commonly
used
series
discuss
interpretation
corresponding
tests.
We
argue
that,
while
allows
better
characterization
statistical
metrics,
it
should
considered
mandatory
validation
step
assess
their
relevance
representing
brain
dynamics.
NeuroImage,
Journal Year:
2021,
Volume and Issue:
238, P. 118204 - 118204
Published: June 1, 2021
Group-level
studies
do
not
capture
individual
differences
in
network
organization,
an
important
prerequisite
for
understanding
neural
substrates
shaping
behavior
and
developing
interventions
clinical
conditions.
Recent
have
employed
'fingerprinting'
analyses
on
functional
connectivity
to
identify
subjects'
idiosyncratic
features.
Here,
we
develop
a
complementary
approach
based
edge-centric
model
of
connectivity,
which
focuses
the
co-fluctuations
edges.
We
first
show
whole-brain
edge
(eFC)
be
robust
substrate
that
improves
identifiability
over
nodal
FC
(nFC)
across
different
datasets
parcellations.
Next,
characterize
at
spatial
scales,
from
single
nodes
level
systems
clusters
using
k-means
clustering.
Across
find
heteromodal
brain
regions
exhibit
consistently
greater
than
unimodal,
sensorimotor,
limbic
regions.
Lastly,
can
further
improved
by
reconstructing
eFC
specific
subsets
its
principal
components.
In
summary,
our
results
highlight
utility
capturing
meaningful
subject-specific
features
sets
stage
future
investigations
into
models.
NeuroImage Clinical,
Journal Year:
2022,
Volume and Issue:
35, P. 103055 - 103055
Published: Jan. 1, 2022
Most
neuroimaging
studies
of
post-stroke
recovery
rely
on
analyses
derived
from
standard
node-centric
functional
connectivity
to
map
the
distributed
effects
in
stroke
patients.
Here,
given
importance
nonlocal
and
diffuse
damage,
we
use
an
edge-centric
approach
order
provide
alternative
description
this
disorder.
These
techniques
allow
for
rendering
metrics
such
as
normalized
entropy,
which
describes
diversity
edge
communities
at
each
node.
Moreover,
enables
identification
high
amplitude
co-fluctuations
fMRI
time
series.
We
found
that
entropy
is
associated
with
lesion
severity
continually
increases
across
patients'
recovery.
Furthermore,
not
only
relate
but
are
also
level
The
current
study
first
application
a
clinical
population
longitudinal
dataset
demonstrates
how
different
perspective
data
analysis
can
further
characterize
topographic
modulations
brain
dynamics.
Communications Biology,
Journal Year:
2022,
Volume and Issue:
5(1)
Published: Sept. 21, 2022
Abstract
Strokes
cause
lesions
that
damage
brain
tissue,
disrupt
normal
activity
patterns
and
can
lead
to
impairments
in
motor
function.
Although
modulation
of
cortical
is
central
stimulation-based
rehabilitative
therapies,
aberrant
adaptive
after
stroke
have
not
yet
been
fully
characterized.
Here,
we
apply
a
dynamics
analysis
approach
study
longitudinal
individuals
with
ischemic
pontine
stroke.
We
first
found
4
commonly
occurring
states
largely
characterized
by
high
amplitude
activations
the
visual,
frontoparietal,
default
mode,
networks.
Stroke
subjects
spent
less
time
frontoparietal
state
compared
controls.
For
dominant-hand
CST
damage,
more
from
1
week
3-6
months
post-stroke
was
associated
better
recovery
over
same
period,
an
association
which
independent
baseline
impairment.
Furthermore,
amount
linked
empirically
functional
connectivity.
This
work
suggests
when
compromised
stroke,
resting
configurations
may
include
increased
activation
network,
facilitate
compensatory
neural
pathways
support
function
traditional
circuits
dominant-hemisphere
are
compromised.