Preservation of ∼12-h ultradian rhythms of gene expression of mRNA and protein metabolism in the absence of canonical circadian clock
Frontiers in Physiology,
Journal Year:
2023,
Volume and Issue:
14
Published: May 30, 2023
Introduction:
Besides
the
∼24-h
circadian
rhythms,
∼12-h
ultradian
rhythms
of
gene
expression,
metabolism
and
behaviors
exist
in
animals
ranging
from
crustaceans
to
mammals.
Three
major
hypotheses
were
proposed
on
origin
mechanisms
regulation
namely,
that
they
are
not
cell-autonomous
controlled
by
a
combination
clock
environmental
cues,
regulated
two
anti-phase
transcription
factors
cell
autonomous
manner,
or
established
oscillator.
Methods:
To
distinguish
among
these
possibilities,
we
performed
post
hoc
analysis
high
temporal
resolution
transcriptome
dataset
cells
lacking
canonical
clock.
Results:
In
both
liver
BMAL1
knockout
mice
Drosophila
S2
cells,
observed
robust
prevalent
expression
enriched
fundamental
processes
mRNA
protein
show
large
convergence
with
those
identified
wild-type
liver.
Bioinformatics
further
predicted
ELF1
ATF6B
as
putative
regulating
independently
fly
mice.
Discussion:
These
findings
provide
additional
evidence
support
existence
an
evolutionarily
conserved
12-h
oscillator
controls
multiple
species.
Language: Английский
Epigenetic regulation of global proteostasis dynamics by RBBP5 ensures mammalian organismal health
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Sept. 13, 2024
Proteostasis
is
vital
for
cellular
health,
with
disruptions
leading
to
pathologies
including
aging,
neurodegeneration
and
metabolic
disorders.
Traditionally,
proteotoxic
stress
responses
were
studied
as
acute
reactions
various
noxious
factors;
however,
recent
evidence
reveals
that
many
proteostasis
stress-response
genes
exhibit
∼12-hour
ultradian
rhythms
under
physiological
conditions
in
mammals.
These
rhythms,
driven
by
an
XBP1s-dependent
12h
oscillator,
are
crucial
managing
proteostasis.
By
exploring
the
chromatin
landscape
of
murine
hepatic
we
identified
RBBP5,
a
key
subunit
COMPASS
complex
writing
H3K4me3,
essential
epigenetic
regulator
RBBP5
indispensable
regulating
both
oscillator
transcriptional
response
stress,
acting
co-activator
transcription
factor
XBP1s.
ablation
leads
increased
sensitivity
chronic
inflammation,
steatosis
mice,
along
impaired
autophagy
reduced
cell
survival
Language: Английский