PhyloJunction: a computational framework for simulating, developing, and teaching evolutionary models DOI Creative Commons
Fábio K. Mendes, Michael J. Landis

bioRxiv (Cold Spring Harbor Laboratory), Journal Year: 2023, Volume and Issue: unknown

Published: Dec. 16, 2023

We introduce PhyloJunction, a computational framework designed to facilitate the prototyping, testing, and characterization of evolutionary models. PhyloJunction is distributed as an open-source Python library that can be used implement variety models, through its flexible graphical modeling architecture dedicated model specification language. Model design use are exposed users via command-line interfaces, which integrate steps simulating, summarizing, visualizing data. This paper describes features - include, but not limited to, general implementation popular family phylogenetic diversification models and, moving forward, how it may expanded only include new also become platform for conducting teaching statistical learning.

Language: Английский

PhyloJunction: a computational framework for simulating, developing, and teaching evolutionary models DOI Creative Commons
Fábio K. Mendes, Michael J. Landis

bioRxiv (Cold Spring Harbor Laboratory), Journal Year: 2023, Volume and Issue: unknown

Published: Dec. 16, 2023

We introduce PhyloJunction, a computational framework designed to facilitate the prototyping, testing, and characterization of evolutionary models. PhyloJunction is distributed as an open-source Python library that can be used implement variety models, through its flexible graphical modeling architecture dedicated model specification language. Model design use are exposed users via command-line interfaces, which integrate steps simulating, summarizing, visualizing data. This paper describes features - include, but not limited to, general implementation popular family phylogenetic diversification models and, moving forward, how it may expanded only include new also become platform for conducting teaching statistical learning.

Language: Английский

Citations

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