Regulation of the X Chromosomes in Caenorhabditis elegans DOI Open Access
Susan Strome, William G. Kelly,

Sevinç Ercan

et al.

Cold Spring Harbor Perspectives in Biology, Journal Year: 2014, Volume and Issue: 6(3), P. a018366 - a018366

Published: March 1, 2014

Susan Strome1, William G. Kelly2, Sevinc Ercan3 and Jason D. Lieb4 1Department of Molecular, Cell Developmental Biology, University California, Santa Cruz, California 95064 2Department Emory University, Atlanta, Georgia 30322 3Department Biology Center for Genomics Systems New York York, 10003 4Department Carolina Genome Sciences, The North at Chapel Hill, 27599 Correspondence: sstrome{at}ucsc.edu

Language: Английский

Epigenetic regulation of development and pathogenesis in fungal plant pathogens DOI Open Access

Akanksha Dubey,

Junhyun Jeon

Molecular Plant Pathology, Journal Year: 2016, Volume and Issue: 18(6), P. 887 - 898

Published: Oct. 17, 2016

Summary Evidently, epigenetics is at forefront in explaining the mechanisms underlying success of human pathogens and identification pathogen‐induced modifications within host plants. However, there a lack studies highlighting role modulation growth pathogenicity fungal plant pathogens. In this review, we attempt to highlight discuss regulation phytopathogens using Magnaporthe oryzae , devastating pathogen, as model system. With perspective wide application understanding development, pathogenesis control other pathogens, provide synthesized view epigenetic conducted on M. date. First, their impact development pathogenicity. Second, unexplored areas research that should be considered near future construct holistic functioning Importantly, complete can help target points combat pathogenesis.

Language: Английский

Citations

64

Regulatory Roles of Histone Modifications in Filamentous Fungal Pathogens DOI Creative Commons
Yiling Lai, Lili Wang,

Weilu Zheng

et al.

Journal of Fungi, Journal Year: 2022, Volume and Issue: 8(6), P. 565 - 565

Published: May 25, 2022

Filamentous fungal pathogens have evolved diverse strategies to infect a variety of hosts including plants and insects. The dynamic infection process requires rapid fine-tuning regulation gene expression programs in response the changing host environment defenses. Therefore, transcriptional reprogramming is critical for development pathogenicity. Histone post-translational modification, one main mechanisms epigenetic regulation, has been shown play an important role expressions, involved in, e.g., development, infection-related morphogenesis, environmental stress responses, biosynthesis secondary metabolites, This review highlights recent findings insights into regulatory histone methylation acetylation pathogenicity, as well their roles modulating pathogenic fungi–host interactions.

Language: Английский

Citations

31

Considerations for Domestication of Novel Strains of Filamentous Fungi DOI Creative Commons

Randi M. Pullen,

Stephen R. Decker, Venkataramanan Subramanian

et al.

ACS Synthetic Biology, Journal Year: 2025, Volume and Issue: unknown

Published: Jan. 30, 2025

Fungi, especially filamentous fungi, are a relatively understudied, biotechnologically useful resource with incredible potential for commercial applications. These multicellular eukaryotic organisms have long been exploited their natural production of commodity chemicals and proteins such as enzymes used in starch processing, detergents, food feed production, pulping paper making biofuels production. The ability fungi to use wide range feedstocks is another key advantage. As chassis organisms, can express cellular machinery, metabolic signal transduction pathways from both prokaryotic origins. Their genomes abound novel genetic elements processes that be harnessed biotechnology Synthetic biology tools becoming inexpensive, modular, expansive while systems beginning provide the level understanding required design increasingly complex synthetic systems. This review covers challenges working offers perspective on approaches needed exploit microbial cell factories.

Language: Английский

Citations

1

The Impact of DNA Methylation in Trichoderma reesei on Cellulase Production and Strain Degeneration DOI Creative Commons
Caroline Danner,

Thiago Machado Mello de Sousa,

Robert L. Mach

et al.

Microorganisms, Journal Year: 2025, Volume and Issue: 13(3), P. 584 - 584

Published: March 4, 2025

The spontaneous loss of cellulase productivity industrial T. reesei strains during production results in significant economic losses. This phenomenon was suggested to be epigenetically regulated, but the previous findings did not explain which epigenetic mechanisms occur and how they promote strain degeneration. Until now, landscape has been poorly understood. study investigated whether DNA methylation are connected, and, if so, what that connection is it relates In order determine impact on degeneration, we induced hypomethylation with hydralazine HCL, showed a reduced non-productive phenotype partially restored productivity. As second test, conducted global cytosine assay, levels between 0.2 1.3% 5-mC. Importantly, exhibited stronger than productive counterparts, patterns varied depending carbon source. final carried out deletion experiments targeting putative methyltransferases Dim2 Rid1, initially occurrence non-producing subpopulation, subsequent sub-cultivation eliminated shows impacts productivity, an understanding can help us develop targeted strategies reduce degeneration improve applications.

Language: Английский

Citations

1

Regulation of the X Chromosomes in Caenorhabditis elegans DOI Open Access
Susan Strome, William G. Kelly,

Sevinç Ercan

et al.

Cold Spring Harbor Perspectives in Biology, Journal Year: 2014, Volume and Issue: 6(3), P. a018366 - a018366

Published: March 1, 2014

Susan Strome1, William G. Kelly2, Sevinc Ercan3 and Jason D. Lieb4 1Department of Molecular, Cell Developmental Biology, University California, Santa Cruz, California 95064 2Department Emory University, Atlanta, Georgia 30322 3Department Biology Center for Genomics Systems New York York, 10003 4Department Carolina Genome Sciences, The North at Chapel Hill, 27599 Correspondence: sstrome{at}ucsc.edu

Language: Английский

Citations

63