Explainable machine learning framework for biomarker discovery by combining biological age and frailty prediction (Preprint) DOI Creative Commons
Xiheng Wang, Jie Ji

Published: May 9, 2024

BACKGROUND Biological age (BA) and frailty represent two distinct health measures that offer valuable insights into the aging process. Existing machine learning (ML) predictors of BA frailty, derived from blood-based biomarkers, lack capability to compare analyze these biomarkers comprehensively. Such comparisons may provide deeper pathways. Objective: This study aimed develop a framework by combining ML with eXplainable Artificial Intelligence (XAI) techniques. OBJECTIVE METHODS We utilized data middle-aged older Chinese adults (≥45 years) in 2011/2012 wave (n=9702) 2015/2016 (n=9455, as test set validation) China Health Retirement Longitudinal Study (CHARLS). Sixteen were used predict frailty. Four tree-based algorithms employed training validation, performance metrics compared select best models. Then, SHapley Additive exPlanations (SHAP) analysis was conducted on selected RESULTS CatBoost performed predictor, Gradient Boosting predictor. Traditional feature importance identified cystatin C glycated hemoglobin major contributors for their respective However, subsequent SHAP demonstrated only primary contributor both models, suggesting it plays an important role CONCLUSIONS Our novel integrates XAI techniques biomarkers. The present approach leverages routine blood can easily incorporate additional providing scalable comprehensive toolset offers quantitative understanding interesting complex physiological traits. CLINICALTRIAL

Language: Английский

Association between the red blood cell distribution width-to-albumin ratio and risk of colorectal and gastric cancers: a cross-sectional study using NHANES 2005–2018 DOI Creative Commons

Jie Luo,

Zhicheng Liu,

Shi-Ji Zhou

et al.

BMC Gastroenterology, Journal Year: 2025, Volume and Issue: 25(1)

Published: April 29, 2025

The red blood cell distribution width-to-albumin ratio (RAR) is a novel biomarker that concurrently reflects nutritional status and inflammation. Unlike traditional cancer risk markers focus on either inflammation or nutrition independently, RAR provides more integrated assessment of these interrelated processes, making it promising tool for prediction. This study aims to investigate the relationship between digestive tract tumors (DTT), with particular emphasis colorectal (CC) gastric (GC). explored DTT using data from 32,953 participants in 2005-2018 National Health Nutrition Examination Survey (NHANES). Although weighted multivariate logistic regression models were used adjust potential confounders, residual confounding selection bias may still affect accuracy generalizability findings, potentially influencing causal inferences. Additionally, subgroup analyses, interaction tests, restricted cubic splines performed further examine associations. A two-sample Mendelian randomization analysis was also conducted DTT. Among participants, 234 diagnosed DTT, including 215 cases CC 19 GC. Higher levels significantly associated an increased (OR = 1.48, 95% CI 1.04-2.11, P < 0.027), but not GC 1.33, 0.45-3.94, 0.60). non-linear association observed. indicated albumin negatively 0.84, 0.73-0.97), while erythrocyte width (RDW) showed no significant association. reveals risk, indicating serve as valuable stratification. For individuals abnormal values, integration supplementary screening tools-such fecal occult testing, colonoscopy, additional biomarkers-could enhance early detection rates CC. strategy would allow healthcare providers effectively identify high-risk tailor personalized prevention strategies.

Language: Английский

Citations

0

A comprehensive review of explainable AI for disease diagnosis DOI Creative Commons
Al Amin Biswas

Array, Journal Year: 2024, Volume and Issue: 22, P. 100345 - 100345

Published: April 26, 2024

Nowadays, artificial intelligence (AI) has been utilized in several domains of the healthcare sector. Despite its effectiveness settings, massive adoption remains limited due to transparency issue, which is considered a significant obstacle. To achieve trust end users, it necessary explain AI models' output. Therefore, explainable (XAI) become apparent as potential solution by providing transparent explanations In this review paper, primary aim articles that are mainly related machine learning (ML) or deep (DL) based human disease diagnoses, and model's decision-making process explained XAI techniques. do that, two journal databases (Scopus IEEE Xplore Digital Library) were thoroughly searched using few predetermined relevant keywords. The PRISMA guidelines have followed determine papers for final analysis, where studies did not meet requirements eliminated. Finally, 90 Q1 selected in-depth covering Then, summarization findings presented, appropriate responses proposed research questions outlined. addition, challenges case diagnosis future directions sector presented.

Language: Английский

Citations

3

Blood Test–Based Age Acceleration Is Inversely Associated with High-Volume Sports Activity DOI Creative Commons
Vencel Juhász,

Anna Ország,

Dorottya Balla

et al.

Medicine & Science in Sports & Exercise, Journal Year: 2024, Volume and Issue: 56(5), P. 868 - 875

Published: Feb. 2, 2024

We develop blood test-based aging clocks and examine how these reflect high-volume sports activity.

Language: Английский

Citations

1

Association of red cell distribution width to albumin ratio with risk of all-cause and cause-specific mortality: two prospective cohort studies DOI Creative Commons
Meng Hao, Shuai Jiang, Xiangnan Li

et al.

medRxiv (Cold Spring Harbor Laboratory), Journal Year: 2024, Volume and Issue: unknown

Published: Jan. 12, 2024

Abstract Background The red cell distribution width to albumin ratio (RAR) has emerged as a reliable prognostic marker for mortality in various diseases. However, whether RAR is associated with remains unknown the general population. Objective Explore all-cause and cause-specific mortality, elucidate dose-response relationship between them. Methods This study included 50622 participants aged 18+ years from US National Health Nutrition Examination Survey (NHANES), 418950 37+ UK Biobank. potential association risk of was evaluated by Cox proportional hazard models. Restricted cubic spline regressions were applied estimate possible nonlinear relationships. Results NHANES documented 7590 deaths over median follow-up 9.4 years, Biobank 36793 14.5 years. In multivariable analysis, elevated significantly higher (NHANES: [HR]: 1.86, 95% confidence interval [CI]: 1.81-1.93; Biobank: HR: 2.01, CI: 1.96-2.06), well due malignant neoplasms, heart disease, cerebrovascular diseases, respiratory diabetes mellitus, others both two cohorts (all P-value < 0.05). Conclusions Higher baseline strongly independently increased promising indicator that simply, reliably, inexpensively accessible identifying high-risk clinical practice.

Language: Английский

Citations

0

Explainable machine learning framework for biomarker discovery by combining biological age and frailty prediction (Preprint) DOI Creative Commons
Xiheng Wang, Jie Ji

Published: May 9, 2024

BACKGROUND Biological age (BA) and frailty represent two distinct health measures that offer valuable insights into the aging process. Existing machine learning (ML) predictors of BA frailty, derived from blood-based biomarkers, lack capability to compare analyze these biomarkers comprehensively. Such comparisons may provide deeper pathways. Objective: This study aimed develop a framework by combining ML with eXplainable Artificial Intelligence (XAI) techniques. OBJECTIVE METHODS We utilized data middle-aged older Chinese adults (≥45 years) in 2011/2012 wave (n=9702) 2015/2016 (n=9455, as test set validation) China Health Retirement Longitudinal Study (CHARLS). Sixteen were used predict frailty. Four tree-based algorithms employed training validation, performance metrics compared select best models. Then, SHapley Additive exPlanations (SHAP) analysis was conducted on selected RESULTS CatBoost performed predictor, Gradient Boosting predictor. Traditional feature importance identified cystatin C glycated hemoglobin major contributors for their respective However, subsequent SHAP demonstrated only primary contributor both models, suggesting it plays an important role CONCLUSIONS Our novel integrates XAI techniques biomarkers. The present approach leverages routine blood can easily incorporate additional providing scalable comprehensive toolset offers quantitative understanding interesting complex physiological traits. CLINICALTRIAL

Language: Английский

Citations

0