Copy number variation contributes to parallel local adaptation in an invasive plant DOI Creative Commons
Jonathan Wilson, Vanessa C. Bieker,

Lotte van Boheemen

et al.

Proceedings of the National Academy of Sciences, Journal Year: 2025, Volume and Issue: 122(10)

Published: March 3, 2025

Adaptation is a critical determinant of the diversification, persistence, and geographic range limits species. Yet genetic basis adaptation often unknown potentially underpinned by wide mutational types-from single nucleotide changes to large-scale alterations chromosome structure. Copy number variation (CNV) thought be an important source adaptive variation, as indicated decades candidate gene studies that point CNVs underlying rapid strong selective pressures. Nevertheless, population-genomic face unique logistical challenges not encountered other forms variation. Consequently, few have systematically investigated contributions at genome-wide scale. We present analysis CNV contributing invasive weed, Ambrosia artemisiifolia. show clear signatures parallel local between North American (native) European (invaded) ranges, implying widespread reuse during shared heterogeneous patterns selection. used principal component (PCA) genotype regions in whole-genome sequences samples collected over last two centuries. identified 16 large up 11.85 megabases length, eight which signals evolutionary change, with pronounced frequency shifts historic modern populations. Our results provide compelling evidence underlies contemporary timescales natural

Language: Английский

Large haploblocks underlie rapid adaptation in the invasive weed Ambrosia artemisiifolia DOI Creative Commons
Paul Battlay, Jonathan Wilson, Vanessa C. Bieker

et al.

Nature Communications, Journal Year: 2023, Volume and Issue: 14(1)

Published: March 27, 2023

Abstract Adaptation is the central feature and leading explanation for evolutionary diversification of life. also notoriously difficult to study in nature, owing its complexity logistically prohibitive timescale. Here, we leverage extensive contemporary historical collections Ambrosia artemisiifolia —an aggressively invasive weed primary cause pollen-induced hayfever—to track phenotypic genetic causes recent local adaptation across native ranges North America Europe, respectively. Large haploblocks—indicative chromosomal inversions—contain a disproportionate share (26%) genomic regions conferring parallel climates between ranges, are associated with rapidly adapting traits, exhibit dramatic frequency shifts over space time. These results highlight importance large-effect standing variants rapid adaptation, which have been critical A. ’s global spread vast climatic gradients.

Language: Английский

Citations

45

Unveiling the resistance of native weed communities: insights for managing invasive weed species in disturbed environments DOI
Wajid Ali Khattak, Jianfan Sun, Rashida Hameed

et al.

Biological reviews/Biological reviews of the Cambridge Philosophical Society, Journal Year: 2024, Volume and Issue: 99(3), P. 753 - 777

Published: Jan. 4, 2024

ABSTRACT Weed communities influence the dynamics of ecosystems, particularly in disturbed environments where anthropogenic activities often result higher pollution. Understanding existing between native weed and invasive species is crucial for effective management normal ecosystem functioning. Recognising potential resistance to invasion can help identify suitable plants restoration operations. This review aims investigate adaptations exhibited by non‐native weeds that may affect invasions within environments. Factors such as ecological characteristics, altered soil conditions, potentially confer a competitive advantage relative or are analysed. Moreover, roles biotic interactions competition, mutualistic relationships, allelopathy shaping described. Emphasis given consideration key factor provides insights conservation efforts Additionally, this underscores need further research unravel underlying mechanisms devise targeted strategies. These strategies aim promote mitigate negative effects By delving deeper into these insights, we gain an understanding ecosystems develop valuable species, restore long‐term sustainability.

Language: Английский

Citations

19

Rapid and repeated local adaptation to climate in an invasive plant DOI
Lotte A. van Boheemen, Daniel Z. Atwater, Kathryn A. Hodgins

et al.

New Phytologist, Journal Year: 2018, Volume and Issue: 222(1), P. 614 - 627

Published: Oct. 27, 2018

Summary Biological invasions provide opportunities to study evolutionary processes occurring over contemporary timescales. To explore the speed and repeatability of adaptation, we examined divergence life‐history traits climate, using latitude as a proxy, in native North American introduced European Australian ranges annual plant Ambrosia artemisiifolia . We explored niche changes following introductions climate dynamic models. In common garden, trait by growing seeds collected across three with highly distinct demographic histories. Heterozygosity–fitness associations were used effect invasion history on potential success. accounted for nonadaptive population differentiation 11 598 single nucleotide polymorphisms. revealed centroid shift warmer, wetter climates ranges. identified repeated latitudinal traits, populations positioned at either end clines. Our data indicate rapid adaptation local despite recent bottleneck limiting genetic variation Australia. Centroid shifts suggest more productive environments, potentially contributing between

Language: Английский

Citations

155

Unravelling the invasion history of the Asian tiger mosquito in Europe DOI
Stéphanie Sherpa, Michaël G. B. Blum, Thibaut Capblancq

et al.

Molecular Ecology, Journal Year: 2019, Volume and Issue: 28(9), P. 2360 - 2377

Published: March 8, 2019

Multiple introductions are key features for the establishment and persistence of introduced species. However, little is known about contribution genetic admixture to invasive potential populations. To address this issue, we studied recent invasion Asian tiger mosquito (Aedes albopictus) in Europe. Combining genome-wide single nucleotide polymorphisms historical knowledge using an approximate Bayesian computation framework, reconstruct colonization routes establish demographic dynamics invasion. The Europe involved at least three independent Albania, North Italy Central that subsequently acted as dispersal centres throughout We show topology human transportation networks shaped histories with being main Introduction modalities conditioned levels diversity invading populations, genetically diverse admixed populations promoted more secondary have spread farther than single-source invasions. This genomic study provides further crucial insights into a general understanding role by modern trade driving biological

Language: Английский

Citations

99

Unravelling the global invasion routes of a worldwide invader, the red swamp crayfish (Procambarus clarkii) DOI
Francisco J. Oficialdegui, Miguel Clavero, Marta I. Sánchez

et al.

Freshwater Biology, Journal Year: 2019, Volume and Issue: 64(8), P. 1382 - 1400

Published: May 15, 2019

Abstract Understanding how introduced species succeed and become widely distributed within non‐native areas is critical to reduce the threats posed by them. Our goal was reconstruct main invasion routes dynamics of a global freshwater invader, red swamp crayfish, Procambarus clarkii , through analysis its genetic variability in both native invasive ranges. We inferred population structure from fragment (608 base pairs) mitochondrial marker cytochrome c oxidase subunit I 1,062 individuals P. addition 354 GenBank sequences, for total 122 populations (22 natives 100 invaded). Genetic assessed using molecular variance non‐metric multidimensional scaling analyses. analysed haplotype frequencies each locality region. The network depicted Pop ART software. A high diversity found range (haplotype [Hd]: 0.90), but also some areas, such as western U.S.A. (Hd: 0.80), Mexico 0.78), hotspots Europe (e.g. southern Spain or Italy), suggesting complex pattern multiple introductions. grouped all localities five differentiated groups according biogeographic origin: area, west Americas, east U.S.A., Asia, Europe. Additionally, identification 15 haplotypes shared between at least two localities, phylogenetic estimation indices differentiation among allowed us identify large admixture range; independent (i.e. westwards eastwards) (Louisiana Texas) with translocations area; stepping‐stone introduction Japan (involving few individuals) themselves China afterwards; entry Louisiana ( ) into their secondary introductions over well other possible central study emphasises need unravelling demographic processes underlying exotic admixture, bridgehead effect, propagule pressure) control spread species. findings highlight value analyses geographic origin source invaded order facilitate management environmental DNA monitoring).

Language: Английский

Citations

91

Bridgehead effect and multiple introductions shape the global invasion history of a termite DOI Creative Commons
Alexander J. Blumenfeld, Pierre‐André Eyer, Claudia Husseneder

et al.

Communications Biology, Journal Year: 2021, Volume and Issue: 4(1)

Published: Feb. 12, 2021

Abstract Native to eastern Asia, the Formosan subterranean termite Coptotermes formosanus (Shiraki) is recognized as one of 100 worst invasive pests in world, with established populations Japan, Hawaii and southeastern United States. Despite its importance, native source(s) C. introductions their pathway out Asia remain elusive. Using ~22,000 SNPs, we retraced invasion history this species through approximate Bayesian computation assessed consequences on genetic patterns demography. We show a complex history, where an initial introduction resulted from two distinct events Hong Kong region. The admixed Hawaiian population subsequently served source, bridgehead, for US. A separate event southcentral China occurred Florida showing admixture first introduction. Overall, these findings further reinforce pivotal role bridgeheads shaping distributions Anthropocene illustrate that global distribution has been shaped by multiple China, which may have prevented possibly reversed loss diversity within range.

Language: Английский

Citations

65

Rapid and Repeated Climate Adaptation Involving Chromosome Inversions following Invasion of an Insect DOI Creative Commons

Li‐Jun Ma,

Li‐Jun Cao,

Jin-Cui Chen

et al.

Molecular Biology and Evolution, Journal Year: 2024, Volume and Issue: 41(3)

Published: Feb. 24, 2024

Abstract Following invasion, insects can become adapted to conditions experienced in their invasive range, but there are few studies on the speed of adaptation and its genomic basis. Here, we examine a small insect pest, Thrips palmi, following contemporary range expansion across sharp climate gradient from subtropics temperate areas. We first found geographically associated population genetic structure inferred stepping-stone dispersal pattern this pest open fields southern China greenhouse environments northern regions, with limited gene flow after colonization. In common garden experiments, both field groups exhibited clinal patterns thermal tolerance as measured by critical maximum (CTmax) closely linked latitude temperature variables. A selection experiment reinforced evolutionary potential CTmax an estimated h2 6.8% for trait. identified 3 inversions genome that were CTmax, accounting 49.9%, 19.6%, 8.6% variance among populations. Other variations outside inversion region specific certain populations functionally conserved. These findings highlight rapid reiterate importance behaving large-effect alleles adaptation.

Language: Английский

Citations

12

The genomic secrets of invasive plants DOI Open Access
Kathryn A. Hodgins, Paul Battlay, Dan G. Bock

et al.

New Phytologist, Journal Year: 2025, Volume and Issue: unknown

Published: Jan. 2, 2025

Summary Genomics has revolutionised the study of invasive species, allowing evolutionary biologists to dissect mechanisms invasion in unprecedented detail. Botanical research played an important role these advances, driving much what we currently know about key determinants success (e.g. hybridisation, whole‐genome duplication). Despite this, a comprehensive review plant genomics been lacking. Here, aim address this gap, highlighting recent discoveries that have helped progress field. For example, by leveraging natural and experimental populations, botanical confirmed importance large‐effect standing variation during adaptation species. Further, genomic investigations plants are increasingly revealing large structural variants, as well genetic changes induced duplication such redundancy or breakdown dosage‐sensitive reproductive barriers, can play adaptive evolution invaders. However, numerous questions remain, including when chromosomal inversions might help hinder invasions, whether gene reuse is common epigenetically mutations underpin plasticity populations. We conclude other outstanding studies poised answer.

Language: Английский

Citations

1

Genomic investigations of successful invasions: the picture emerging from recent studies DOI Creative Commons
Joanna Kołodziejczyk, Anna Fijarczyk, Ilga Porth

et al.

Biological reviews/Biological reviews of the Cambridge Philosophical Society, Journal Year: 2025, Volume and Issue: unknown

Published: Feb. 16, 2025

ABSTRACT Invasion biology aims to identify traits and mechanisms that contribute successful invasions, while also providing general insights into the underlying population expansion adaptation rapid climate habitat changes. Certain phenotypic attributes have been linked role of genetics has critical in understanding invasive species. Nevertheless, a comprehensive summary evaluating most common evolutionary associated with invasions across species environments is still lacking. Here we present systematic review studies since 2015 applied genomic tools investigate different organisms. We examine demographic patterns such as changes diversity at level, presence genetic bottlenecks gene flow range. selection from standing variation de novo mutations, hybridisation introgression, all which can an impact on invasion success. This recent articles led creation searchable database provide researchers accessible resource. Analysis this allowed quantitative assessment adaptive acting A predominant admixture increasing levels enabling molecular novel habitats important finding our study. The “genetic paradox” was not validated data ecosystems. Even though drift commonly reported upon invasion, large reduction rarely observed. Any decrease often relatively mild almost always restored via between populations. fact loci under are frequently detected suggests level hindered. above findings confirmed herein for first time semi‐quantitative manner by data. point gaps potential improvements design driving These include scarcity sampling multiple native populations, identification sources, longitudinal sampling, integration fitness measures analyses. note whole genome exploited fully predicting potential. Comparative identifying features promoting underrepresented despite their use tool control.

Language: Английский

Citations

1

Trait Evolution in Invasive Species DOI Open Access
Kathryn A. Hodgins, Dan G. Bock, Loren H. Rieseberg

et al.

Annual Plant Reviews online, Journal Year: 2018, Volume and Issue: unknown, P. 459 - 496

Published: Aug. 14, 2018

Abstract One of the most exciting recent developments in field invasion biology has been growing realisation that evolution can determine invasive species' success. Here, we review research on contemporary populations, with a focus traits have potential to contribute spread. Evidence available so far indicates adaptive divergence quantitative predominates, although contribution non‐adaptive processes should not be easily discounted. Further, populations appears more frequently spurred by abiotic factors, rather than escape from natural enemies. Important progress remains made role hybridisation success, or conditions under which rapid phenotypic plasticity at key leads invasions. Also, do yet firm grasp how often expansion load limits While convincing examples adaptation along geographic climatic gradients are available, highlight such clines would arise irrespective biotic conditions. We propose potentially important future lines investigation illuminate mechanistic basis success while maximising value species for understanding evolutionary processes.

Language: Английский

Citations

78