The
functioning
of
forest
ecosystems
depends
on
the
taxonomic
and
ecological
diversity
soil
fungi.
Urbanization
is
increasing
worldwide
regarded
a
major
driver
environmental
change
altering
local
species
assemblages
in
urban
forest.
We
investigated
whether
degree
urbanization
characteristics
affect
fungal
community
20
beech
forests
located
along
rural–urban
gradient
city
Basel
its
suburbs
(Switzerland).
analyzed
their
communities
by
DNA
metabarcoding
rDNA
ITS2
region
related
these
data
to
vegetation
properties.
number
OTUs
examined
ranged
from
170
303.
Richness,
evenness
were
all
significantly
affected
urbanization,
but
different
ways.
OTU
richness
was
highest
areas
with
low
lowest
rural
areas.
In
contrast,
increased
urbanization.
Different
phyla
guilds
showed
distinct
patterns
relative
abundance
rural-urban
gradient.
reduced
symbiotrophic
fungi,
that
saprotrophic
pathotrophic
Our
results
show
alters
community,
which
turn
can
lead
changes
ecosystems.
Landscape Ecology,
Journal Year:
2024,
Volume and Issue:
39(8)
Published: Aug. 3, 2024
Abstract
Context
Urban
forest
soils
represent
significant
reservoirs
of
biodiversity
in
cities.
Retaining
this
diversity
under
urban
land-use
change
requires
understanding
on
how
species
richness,
community
assembly
and
uniqueness
assemblages
are
related
to
local
characteristics
surrounding
landscape
structure.
Objectives
Our
aim
was
assess
the
significance
relative
importance
logging
history,
tree
composition
urbanization
shaping
soil
microbial
communities
across
spruce-dominated
landscapes.
We
investigated
responses
from
three
complementary
viewpoints:
diversity,
patterns
uniqueness.
Methods
collected
bacterial
fungal
metabarcoding
data
73
sites
distributed
centers
southern
Finland.
these
measurements
intensity,
degree
urbanization.
Results
Logging
affected
site-scale
but
effects
varied
between
groups.
Only
intensity
had
a
imprint
assembly,
effect
restricted
bacteria.
Relative
at
landscape-scale
coupled
with
all
groups,
further
by
saprotrophic
fungi
ectomycorrhizal
fungi.
Conclusions
In
context
forests,
locally
diverse
stands
not
necessarily
same
as
those
that
contribute
most
diversity.
Identifying
preserving
contrasting
stand
structures,
which
support
distinctive
assemblages,
may
be
winning
strategy
maintaining
wide
range
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: May 16, 2023
Abstract
Temperate
forests
are
particularly
threatened
by
urbanization
and
fragmentation,
with
over
20%
(120lJ000
km
2
)
of
recently
urbanized
land
in
the
U.S.
subsuming
natural
forests.
We
leveraged
a
unique,
well-characterized
urban-to-rural
forest
edge-to-interior
gradient
to
identify
combined
impact
these
two
use
changes
-
fragmentation
on
soil
microbial
community
native,
remnant
found
evidence
mutualism
breakdown
between
trees
their
fungal
root
mutualists
(ectomycorrhizal
(ECM)
fungi)
urbanization,
where
ECM
fungi
colonized
fewer
tree
roots
had
less
connectivity
microbiome
networks
urban
compared
rural
However,
did
not
reduce
relative
abundance
soils;
instead,
alone
led
strong
reductions
abundance.
At
edges,
were
replaced
plant
animal
pathogens,
as
well
copiotrophic,
xenobiotics-degrading,
nitrogen-cycling
bacteria,
including
nitrifiers
denitrifiers.
Urbanization
interacted
generate
“suites”
microbes,
interior
harboring
highly
homogenized
microbiomes,
while
edge
microbiomes
more
heterogeneous
stable,
showing
increased
vulnerability
low
moisture.
When
scaled
regional
level,
we
that
soils
projected
harbor
high
abundances
pathogens
denitrifying
even
areas,
due
extreme,
widespread
fragmentation.
Our
results
highlight
potential
for
dysfunction
greenhouse
gas
production
temperate
regions
subsumed
expansion,
both
now
future.
Significance
Statement
increasingly
altering
Earth’s
ecosystems,
yet
effects
crucial
health
climate
regulation,
remain
unclear.
data
indicate
that,
forested
land,
combined,
compounding
stressors
reshape
ways
could
lead
pathogen
infections
plants
animals,
higher
rates
N
loss
denitrification,
possibility
symbiont
extinctions.
By
identifying
specific
environmental
shifts,
our
analysis
can
be
used
inform
development
management
plans
mitigate
impacts
sustain
quality
ecosystem
services
native
provide
society
coming
decades.
Classification
Biological
Sciences/Ecology
The
functioning
of
forest
ecosystems
depends
on
the
taxonomic
and
ecological
diversity
soil
fungi.
Urbanization
is
increasing
worldwide
regarded
a
major
driver
environmental
change
altering
local
species
assemblages
in
urban
forest.
We
investigated
whether
degree
urbanization
characteristics
affect
fungal
community
20
beech
forests
located
along
rural–urban
gradient
city
Basel
its
suburbs
(Switzerland).
analyzed
their
communities
by
DNA
metabarcoding
rDNA
ITS2
region
related
these
data
to
vegetation
properties.
number
OTUs
examined
ranged
from
170
303.
Richness,
evenness
were
all
significantly
affected
urbanization,
but
different
ways.
OTU
richness
was
highest
areas
with
low
lowest
rural
areas.
In
contrast,
increased
urbanization.
Different
phyla
guilds
showed
distinct
patterns
relative
abundance
rural-urban
gradient.
reduced
symbiotrophic
fungi,
that
saprotrophic
pathotrophic
Our
results
show
alters
community,
which
turn
can
lead
changes
ecosystems.