Bioinformatics Analysis of Diadenylate Cyclase Regulation on Cyclic Diadenosine Monophosphate Biosynthesis in Exopolysaccharide Production by Leuconostoc mesenteroides DRP105
Wenna Yu,
No information about this author
Liansheng Yu,
No information about this author
Tao Li
No information about this author
et al.
Fermentation,
Journal Year:
2025,
Volume and Issue:
11(4), P. 196 - 196
Published: April 7, 2025
Lactic
acid
bacteria
exopolysaccharides
(EPS)
have
a
variety
of
excellent
biological
functions
and
are
widely
used
in
the
food
pharmaceutical
industries.
The
complex
metabolic
system
lactic
mechanism
EPS
biosynthesis
not
been
fully
analyzed,
which
limits
wider
application
EPS.
synthesis
is
regulated
by
cyclic
diadenosine
monophosphate
(c-di-AMP),
but
exact
remains
unclear.
Dac
pde
c-di-AMP
anabolic
genes,
gtfA,
gtfB
gtfC
gene
clusters,
among
was
key
for
Leuconostoc
mesenteroides
DRP105.
In
order
to
explore
whether
diadenylate
cyclase
(DAC)
can
catalyze
from
ATP,
sequence
DAC
analyzed
bioinformatics
based
on
whole
genome
sequence.
CdaA
type
containing
classical
domain
DisA_N
DGA
RHR
motifs.
secondary
structure
mainly
composed
α-helices,
AlphaFold2
model
3D
protein
evaluate
rationality
model.
A
total
8
salt
bridges,
21
hydrogen
bonds
221
non-bonded
interactions
were
found
between
GtfC.
Molecular
docking
simulations
revealed
ATP1
ATP2
occupied
binding
pocket
interacted
directly
with
site
residues
DAC.
molecular
dynamics
showed
that
ATP
molecules
relatively
stable.
Gene
enzyme
correlation
analysis
dac
expression
significantly
positively
correlated
activity,
content
production,
had
no
significant
PDE
activity
responsible
degradation.
Bioinformatics
regulatory
role
helpful
reveal
biosynthetic
provide
theoretical
basis
large-scale
industrial
production
Language: Английский
Coordinated regulation of osmotic imbalance by c-di-AMP shapes ß-lactam tolerance in Group B Streptococcus
Terry Brissac,
No information about this author
Cécile Guyonnet,
No information about this author
Aymane Sadouni
No information about this author
et al.
microLife,
Journal Year:
2024,
Volume and Issue:
5
Published: Jan. 1, 2024
Abstract
Streptococcus
agalactiae
is
among
the
few
pathogens
that
have
not
developed
resistance
to
ß-lactam
antibiotics
despite
decades
of
clinical
use.
The
molecular
basis
this
long-lasting
susceptibility
has
been
investigated,
and
it
known
whether
specific
mechanisms
constrain
emergence
resistance.
In
study,
we
first
report
tolerance
due
inactivation
c-di-AMP
phosphodiesterase
GdpP.
Mechanistically,
depends
on
antagonistic
regulation
by
repressor
BusR,
which
activated
negatively
regulates
through
BusAB
osmolyte
transporter
AmaP/Asp23/GlsB
cell
envelope
stress
complex.
BusR
transcriptional
response
synergistic
with
simultaneous
allosteric
inhibition
potassium
transporters
c-di-AMP,
individually
contribute
low-level
tolerance.
Genome-wide
transposon
mutagenesis
confirms
role
GdpP
highlights
functional
interactions
between
a
lysozyme-like
hydrolase,
KhpAB
RNA
chaperone
protein
S
immunomodulator
in
GBS
ß-lactam.
Overall,
demonstrate
acts
as
turgor
pressure
rheostat,
coordinating
an
integrated
at
post-translational
levels
wall
weakening
caused
activity,
reveal
additional
could
foster
Language: Английский
Borrelia burgdorferi Secretes c-di-AMP as an Extracellular Pathogen-Associated Molecular Pattern to Elicit Type I Interferon Responses in Mammalian Hosts
Raj Priya,
No information about this author
Meiping Ye,
No information about this author
Sajith Raghunanadanan
No information about this author
et al.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Aug. 16, 2024
ABSTRACT
Borrelia
burgdorferi
(
B.
),
an
extracellular
spirochetal
pathogen,
elicits
a
type-I
interferon
(IFN-I)
response
that
contributes
to
the
pathology
of
Lyme
disease,
including
development
and
severity
arthritis.
However,
specific
Pathogen-Associated
Molecular
Patterns
(PAMPs)
responsible
for
triggering
IFN-I
are
not
well
understood.
Previous
studies
have
identified
unknown,
nuclease-resistant
component
in
culture
supernatants
significantly
stimulates
response,
but
its
identity
remains
unknown.
In
this
study,
we
reveal
secretes
cyclic-di-adenosine
monophosphate
(c-di-AMP)
as
key
PAMP,
inducing
host
macrophages.
Using
genetically
manipulated
strains,
demonstrate
requirement
c-di-AMP
stimulating
by
macrophages
ex
vivo
.
Additionally,
infecting
mice
with
alongside
exogenous
resulted
markedly
increased
mouse
tissues.
Furthermore,
inactivation
or
inhibition
STING
signaling
pathway
reduced
indicating
c-di-AMP-induced
production
is
STING-dependent.
Our
findings
identify
crucial
PAMP
secreted
elicit
via
activation
pathway,
suggesting
targeting
could
represent
novel
therapeutic
strategy
against
SUMMARY
,
bacteria
causes
induces
robust
immune
(IFN-I).
While
helps
combat
infection,
it
also
complications
such
research
aimed
bacterial
triggers
response.
We
discovered
releases
second
messenger
molecule,
(c-di-AMP),
which
recognized
cells
subsequently
production.
This
finding
significant
advances
our
understanding
disease
pathogenesis
offers
new
tackle
c-di-AMP,
may
be
able
reduce
mitigate
long-term
tissue
damage.
One
sentence
summary
Type
I
IFN
Language: Английский
An Oral Nanovaccine Secreted by Genetically Engineered and Ultrasound‐Responsive Bacteria for Colon Cancer Immunotherapy
Advanced Functional Materials,
Journal Year:
2024,
Volume and Issue:
unknown
Published: Dec. 4, 2024
Abstract
Colorectal
cancers
represent
a
major
global
morbidity
and
mortality
burden,
neccessitating
improved
treatment
paradigms.
In
this
work,
an
ingestible,
genetically
engineered
Escherichia
coli
(
E.
)
1917
termed
“
(AH1‐CDA‐Co1)”
is
designed
that
upon
ultrasound
exposure
secretes
bacterial
outer
membrane
vesicles
(OMV)
incorporating
the
AH1
tumor
rejection
epitope,
enzyme
producing
stimulator
of
interferon
genes
(STING)
agonist
CDA,
microfold
cell‐targeting
peptide
Co1.
For
oral
administration,
polydopamine
system
(iPDA)
coating
on
bacteria
exploited
to
resist
acidic
condition
in
stomach,
increase
survival,
prolong
intestinal
transit
time.
Upon
harmless
exposure,
sustained
secretion
OMV
vaccines
triggered
efficiently
cross
epithelium.
Both
cyclic
GMP–AMP
synthase
(cGAS)‐STING
TLR4
innate
immune
signaling
pathways
are
activated,
triggering
long‐term
antigen‐specific
responses
overcome
immunosuppressive
microenvironment.
subcutaneous
orthotopic
murine
colorectal
models,
(AH1‐CDA‐Co1)@iPDA
inhibits
growth
prolongs
survival
without
recurrence.
also
recurrence
postoperative
colonrectal
model
lymph
node
metastases.
Taken
together,
demonstrates
potent
vaccine
for
colon
cancer
immunotherapy.
Language: Английский