Global Ecology and Biogeography,
Journal Year:
2017,
Volume and Issue:
26(12), P. 1357 - 1373
Published: Oct. 12, 2017
Abstract
Aim
Tropical
elevation
gradients
are
natural
laboratories
to
assess
how
changing
climate
can
influence
tropical
forests.
However,
there
is
a
need
for
theory
and
integrated
data
collection
scale
from
traits
ecosystems.
We
predictions
of
novel
trait‐based
scaling
theory,
including
whether
observed
shifts
in
forest
across
broad
temperature
gradient
consistent
with
local
phenotypic
optima
adaptive
compensation
temperature.
Location
An
spanning
3,300
m
consisting
thousands
tree
trait
measures
taken
16
1‐ha
plots
southern
Perú,
where
gross
net
primary
productivity
(GPP
NPP)
were
measured.
Time
period
April
November
2013.
Major
taxa
studied
Plants;
trees.
Methods
developed
communities
ecosystems
tested
several
predictions.
assessed
the
covariation
between
climate,
traits,
biomass
GPP
NPP.
measured
multiple
linked
variation
growth
their
frequency
distributions
within
gradient.
paired
these
individuals
forests
simultaneous
ecosystem
productivity.
Results
Consistent
NPP
primarily
scaled
biomass,
but
secondary
effect
on
was
much
less
than
expected.
This
weak
dependence
appears
reflect
directional
mean
community
that
underlie
decreases
site
Main
conclusions
The
shift
trees
dominate
more
cold
environments
an
‘adaptive/acclimatory’
kinetic
effects
leaf
photosynthesis
growth.
Forest
showed
overly
peaked
skewed
distributions,
importance
filtering
optimal
recent
species
composition
dominance
attributable
warming
change.
Trait‐based
provides
basis
predict
have
will
functioning
Frontiers in Ecology and Evolution,
Journal Year:
2019,
Volume and Issue:
7
Published: Aug. 13, 2019
Landscapes
and
the
ecological
processes
they
support
are
inherently
complex
systems,
in
that
have
large
numbers
of
heterogeneous
interacting
components,
interact
multiple
ways,
exhibit
scale
dependence,
non-linear
dynamics,
emergent
properties.
The
properties
landscapes
encompass
a
broad
range
influence
biodiversity,
ecosystem
processes,
human
environments.
These
properties,
such
as
nutrient
cycling,
dispersal,
evolutionary
adaptation
organisms
to
their
environments,
focus
this
article,
disturbance
regimes
(including
wildfire),
operate
at
scales
relevant
societies,
but
these
also
often
which
dynamics
most
difficult
understand
predict.
Modeling
interactions
landscape
scale,
including
future
states
biological
communities
with
each
other
fire,
requires
quantitative
metrics
algorithms
minimize
error
propagation
across
scales.
We
identify
three
intrinsic
limitations
progress
ecology,
ecology
general:
(1)
problem
coarse-graining,
or
how
aggregate
fine-scale
information
larger
statistically
unbiased
manner;
(2)
middle-number
problem,
describes
systems
elements
too
few
varied
be
amenable
global
averaging,
numerous
computationally
tractable;
(3)
non-stationarity,
modeled
relationships
parameter
choices
valid
one
environment
may
not
hold
when
projected
onto
environments
warming
climate.
illustrate
challenges
examples
drawn
from
context
wildfire.
Quantitative
scaling
key
moving
forward,
we
review
recent
paths
developing
laws
ecology.
incorporate
concepts
compression
state
spaces
complexity
theory
suggest
ways
overcome
problems
presented
by
domain,
non-stationarity.
Ecography,
Journal Year:
2020,
Volume and Issue:
43(11), P. 1571 - 1590
Published: Sept. 29, 2020
Coincident
with
recent
global
warming,
species
have
shifted
their
geographic
distributions
to
cooler
environments,
generally
by
moving
along
thermal
axes
higher
latitudes,
elevations
or
deeper
waters.
While
these
shifts
allow
organisms
track
niche,
three
also
covary
non‐climatic
abiotic
factors
that
could
pose
challenges
range‐shifting
plants
and
animals.
Such
novel
conditions
present
an
unappreciated
pitfall
for
researchers
–
from
both
empirical
predictive
viewpoints
who
study
the
redistribution
of
under
climate
change.
Climate,
particularly
temperature,
is
often
assumed
be
primary
factor
in
limiting
distributions,
decades
biology
research
made
correlative
mechanistic
understanding
temperature
most
accessible
commonly
used
response
any
factor.
Receiving
far
less
attention,
however,
gradients
oxygen,
light,
pressure,
pH
water
availability
latitude,
elevation,
and/or
ocean
depth,
show
strong
physiological
behavioral
adaptations
variables
within
historic
ranges.
Here,
we
discuss
how
may
disrupt
climate‐driven
range
shifts,
as
well
variety
use
overcome
conditions,
emphasizing
which
taxa
limited
this
capacity.
We
highlight
need
scientists
extend
incorporate
non‐climatic,
create
a
more
ecologically
relevant
animals
interact
environment,
face
demonstrate
additional
can
integrated
into
change
better
inform
expectations
provide
recommendations
addressing
challenge
predicting
future
environments.
PLoS ONE,
Journal Year:
2019,
Volume and Issue:
14(2), P. e0206711 - e0206711
Published: Feb. 7, 2019
Research
in
applied
ecology
provides
scientific
evidence
to
guide
conservation
policy
and
management.
Applied
is
becoming
increasingly
quantitative
model
selection
via
information
criteria
has
become
a
common
statistical
modeling
approach.
Unfortunately,
parameters
that
contain
little
no
useful
are
commonly
presented
interpreted
as
important
ecology.
I
review
the
concept
of
an
uninformative
parameter
using
perform
literature
measure
prevalence
studies
applying
Akaike's
Information
Criterion
(AIC)
2014
four
top
journals
(Biological
Conservation,
Conservation
Biology,
Ecological
Applications,
Journal
Ecology).
Twenty-one
percent
reviewed
AIC
metrics.
Many
(31.5%)
metrics
had
or
were
very
likely
have
set.
In
addition,
more
than
40%
insufficient
assess
presence
absence
Given
with
status
(71.5%),
surmise
much
recommendations
based
on
research
may
not
be
supported
by
data
analysis.
provide
warning
signals
decision
tree
assist
authors,
reviewers,
editors
screen
for
criteria.
end,
careful
thinking
at
every
step
process
greater
reporting
standards
required
detect
adopting
Scientific Reports,
Journal Year:
2019,
Volume and Issue:
9(1)
Published: April 5, 2019
Abstract
The
modification
of
river
flow
regimes
poses
a
significant
threat
to
the
world’s
freshwater
ecosystems.
Northern
Australia’s
resources,
particularly
dry
season
flows,
are
being
increasingly
modified
support
human
development,
potentially
threatening
aquatic
ecosystems
and
biodiversity,
including
fish.
More
information
is
urgently
needed
on
ecology
fishes
in
this
region,
their
habitat
requirements,
water
policy
management
ensure
future
sustainable
development.
This
study
used
electrofishing
survey
methods
quantify
use
20
common
fish
taxa
Daly
River
wet-dry
tropics.
Of
twenty
measured
variables,
depth
velocity
were
two
most
important
factors
discriminating
for
majority
taxa.
Four
distinct
guilds
identified,
largely
classified
according
depth,
structural
complexity.
Ontogenetic
shifts
also
observed
three
species.
highlights
need
maintain
flows
that
diversity
riverine
mesohabitats
fishes.
In
particular,
shallow
fast-flowing
areas
provided
critical
nursery
refuge
habitats
some
species,
but
vulnerable
level
reductions
due
extraction.
By
highlighting
importance
fishes,
assists
managers
decision
making
ecological
risks
extractions
from
tropical
rivers,
especially
low
protect
native
Ecological Monographs,
Journal Year:
2019,
Volume and Issue:
89(2)
Published: Jan. 24, 2019
Abstract
Successfully
predicting
the
future
states
of
systems
that
are
complex,
stochastic,
and
potentially
chaotic
is
a
major
challenge.
Model
forecasting
error
(
FE
)
usual
measure
success;
however
model
predictions
provide
no
insights
into
potential
for
improvement.
In
short,
realized
predictability
specific
uninformative
about
whether
system
inherently
predictable
or
chosen
poor
match
our
observations
thereof.
Ideally,
proficiency
would
be
judged
with
respect
to
systems’
intrinsic
predictability,
highest
achievable
given
degree
which
dynamics
result
deterministic
vs.
stochastic
processes.
Intrinsic
may
quantified
permutation
entropy
PE
),
model‐free,
information‐theoretic
complexity
time
series.
By
means
simulations,
we
show
correlation
exists
between
estimated
how
stochasticity,
process
error,
affect
relationship.
This
relationship
verified
data
set
461
empirical
ecological
We
deviations
from
expected
–
related
covariates
quality
nonlinearity
dynamics.
These
results
demonstrate
theoretically
grounded
basis
model‐free
evaluation
system's
predictability.
Identifying
gap
series
will
enable
researchers
understand
limited
by
quantity
their
ability
explain
data.
also
provides
baseline
against
modeling
efforts
can
evaluated.
Journal of Biogeography,
Journal Year:
2020,
Volume and Issue:
47(3), P. 615 - 629
Published: Jan. 6, 2020
Abstract
Aim
Cities
worldwide
are
characterized
by
unique
human
stressors
that
filter
species
based
on
their
traits,
potentially
leading
to
biodiversity
loss.
The
knowledge
of
which
filtered
and
at
scale
is
important
gain
a
more
mechanistic
understanding
urban
community
assembly
develop
strategies
manage
impact
ecosystems.
We
investigate
the
ecological
mechanisms
shaping
assembly,
taking
into
account
changes
across
scales,
taxa
green
space
types.
Location
City
Zurich,
Switzerland.
Taxon
Carabid
beetles
wild
bees.
Methods
use
large
occurrence
trait
dataset
with
high
spatial
resolution
assess
filtering
effect
medium‐sized
city
regional
pool
potential
colonists.
then
from
five
widely
distributed
types
spaces.
Results
found
our
model
selects
for
functionally
similar
but
taxonomically
diverse
bee
carabid
beetle
pool.
Within
city,
processes
vary
among
resulting
in
taxonomic
functional
composition.
Main
conclusions
Our
findings
suggest
multi‐scale
process
dominated
strong
environmental
an
This
leads
selection
pre‐adapted
conditions.
Spatial
habitat
heterogeneity
within
UGS
can
maintain
diversity
cities.
However,
increasing
would
require
stronger
management
efforts
consider
processes.
Trends in Ecology & Evolution,
Journal Year:
2021,
Volume and Issue:
36(9), P. 797 - 807
Published: May 29, 2021
Research
aiming
to
understand
the
role
of
ecological
change
in
hominin
evolution
has
fueled
generation
paleoclimatic
and
paleoenvironmental
records
across
Africa.
Limitations
conventional
methods
for
inferring
ecology–evolution
relationships
mean
that
more
data
have
not
always
led
a
deeper
understanding
evolution.
We
outline
several
challenges
hindered
progress,
highlight
how
recent
research
is
addressing
them.
This
confronting
limitations
fossil
record,
contending
with
proxy
spanning
range
spatiotemporal
scales,
providing
stronger
inferential
approach
hypothesis
testing.
Addressing
obstacles
progress
will
enable
robust
between
A
central
goal
paleoanthropology
Over
past
decades
researchers
expanded
record
assembled
detailed
late
Cenozoic
paleoclimatic,
paleoenvironmental,
paleoecological
archives.
However,
effective
use
these
precluded
by
pattern-matching
strategies
causal
evolutionary
change.
examine
them
(i)
an
incomplete
(ii)
datasets
varied
(iii)
using
theoretical
frameworks
build
inferences.
Expanding
on
this
work
promises
transform
into
opportunities
set
stage
new
phase
paleoanthropological
research.
molecular
fossils
(e.g.,
organic
compounds)
are
preserved
soils
sedimentary
records,
which
indicative
environments,
climates,
fire
regimes.
geology,
region
Earth's
surface
where
there
net
accumulation
deposits
over
time
may
also
preserve
record.
physical
environment
rocks
formed
floodplains,
rivers,
lakes,
oceans)
identified
basis
lithofacies
characteristics
sediment
type
bedding
structures).
respectively,
oldest
youngest
appearance
taxon
together
define
observed
temporal
taxon.
These
dates
frequently
revised
discoveries.
computer
simulations
illustrating
macroscale
patterns
emerge
through
microscale
interactions
individual
system
components
time.
macroscopic
wear
animal's
teeth
result
from
processing
foods
different
mechanical
properties.
microscopic
observations
based
natural
systems.
In
taphonomy,
example,
refers
studies
taphonomic
processes
bone
consumption
carnivores)
absence
experimental
manipulation.
known
as
Milankovitch
cycles,
cyclical
variations
Earth;'s
orbit
(eccentricity,
precession,
obliquity)
drive
climate
geological
timescales.
CaCO3
precipitated
during
soil
formation,
usually
seasonally
dry
environments.
They
carbon
oxygen
isotope
ratios
reflect
dominant
vegetation
or
water
dynamics
evaporation),
respectively.
spatial
scales
process
phenomenon
occurs.
paleoecology,
extents
often
local
continental,
years
millions
years.
study
involved
formation
death,
decay,
scavenging,
burial,
mineralization),
affect
information
samples
life.
number
species
biotic
community;
context
clade,
evidence
it
included
than
one
at
any
given
outcome
control
much
represented
assemblage
(taphonomic
time-averaging),
analytical
decisions
concerning
aggregate
stratigraphic
horizons
localities
(analytical
time-averaging).
composition
speciation,
extinction,
dispersal.
model
macroevolutionary
developed
Elisabeth
S.
Vrba
climate-driven
changes
habitats
leads
synchronous
peak
turnover
(extinction,
dispersal)
multiple
lineages.
applied
African
proposing
global
cooling
2.8
2.5
Ma
major
pulse
first
Homo
Paranthropus
[51.Vrba
E.S.
The
antelopes
(Mammalia,
Bovidae)
relation
human
paleoclimate.in:
Paleoclimate
Evolution
Emphasis
Human
Origins.
Yale
University
Press,
1995:
385-424Google
Scholar,68.Vrba
Mammals
key
theory.J.
Mammal.
1992;
73:
1-28Crossref
Scopus
(277)
Google
Scholar].
Philosophical Transactions of the Royal Society B Biological Sciences,
Journal Year:
2021,
Volume and Issue:
376(1837), P. 20210063 - 20210063
Published: Sept. 20, 2021
Networks
of
species
interactions
underpin
numerous
ecosystem
processes,
but
comprehensively
sampling
these
is
difficult.
Interactions
intrinsically
vary
across
space
and
time,
given
the
number
that
compose
ecological
communities,
it
can
be
tough
to
distinguish
between
a
true
negative
(where
two
never
interact)
from
false
have
not
been
observed
interacting
even
though
they
actually
do).
Assessing
likelihood
an
imperative
for
several
fields
ecology.
This
means
predict
species-and
describe
structure,
variation,
change
networks
form-we
need
rely
on
modelling
tools.
Here,
we
provide
proof-of-concept,
where
show
how
simple
neural
network
model
makes
accurate
predictions
about
limited
data.
We
then
assess
challenges
opportunities
associated
with
improving
interaction
predictions,
conceptual
roadmap
forward
towards
predictive
models
explicitly
spatial
temporal.
conclude
brief
primer
relevant
methods
tools
needed
start
building
models,
which
hope
will
guide
this
research
programme
forward.
article
part
theme
issue
'Infectious
disease
macroecology:
parasite
diversity
dynamics
globe'.
Ecosphere,
Journal Year:
2021,
Volume and Issue:
12(3)
Published: March 1, 2021
Abstract
A
key
assumption
in
species
distribution
modeling
(SDM)
with
presence‐background
(PB)
methods
is
that
sampling
of
occurrence
localities
unbiased
and
any
bias
proportional
to
the
background
environmental
covariates.
This
rarely
met
when
SDM
practitioners
rely
on
federated
museum
records
from
natural
history
collections
for
geo‐located
occurrences
due
inherent
found
these
collections.
We
use
a
simulation
approach
explore
effectiveness
three
developed
account
PB
frameworks.
Two
careful
filtering
observation
data—geographic
thinning
(G‐Filter)
(E‐Filter)—while
third,
FactorBiasOut,
creates
selection
weights
data
locations
toward
areas
where
dataset
was
sampled.
While
have
been
assessed
previously,
evaluation
has
emphasized
spatial
predictions
habitat
potential.
Here,
we
dig
deeper
into
by
exploring
how
not
only
affects
potential,
but
also
our
understanding
niche
characteristics
such
as
which
explanatory
variables
response
curves
best
represent
species–environment
relationships.
simulate
100
virtual
ranging
generalist
specialist
their
preferences
introduce
geographic
at
intensity
levels
measure
each
correction
method
(1)
predict
true
probability
across
study
area,
(2)
recover
relationships,
(3)
identify
variables.
find
FactorBiasOut
most
often
showed
greatest
improvement
recreating
known
distributions
did
no
better
correctly
identifying
covariates
or
relationships
than
G‐Filter
E‐Filter
methods.
Narrow
are
problematic
biased
calibration
datasets,
can,
some
cases,
make
worse.
Methods in Ecology and Evolution,
Journal Year:
2022,
Volume and Issue:
14(3), P. 746 - 756
Published: Aug. 11, 2022
Abstract
Ecological
forecasting
provides
a
powerful
set
of
methods
for
predicting
short‐
and
long‐term
change
in
living
systems.
Forecasts
are
now
widely
produced,
enabling
proactive
management
many
applied
ecological
problems.
However,
despite
numerous
calls
an
increased
emphasis
on
prediction
ecology,
the
potential
to
accelerate
theory
development
remains
underrealized.
Here,
we
provide
conceptual
framework
describing
how
forecasts
can
energize
advance
theory.
We
emphasize
opportunities
future
progress
this
area
through
forecast
development,
comparison
synthesis.
Our
describes
approach
shed
new
light
existing
theories
while
also
allowing
researchers
address
novel
questions.
Through
rigorous
repeated
testing
hypotheses,
help
refine
understand
their
generality
across
Meanwhile,
synthesizing
allows
about
relative
predictability
variables
horizons
scales.
envision
where
is
integrated
as
part
toolset
used
fundamental
ecology.
By
outlining
relevance
theory,
aim
decrease
barriers
entry
broaden
community
using
insight.