Biotechnology and Genetic Engineering Reviews,
Journal Year:
2022,
Volume and Issue:
39(2), P. 225 - 258
Published: Aug. 28, 2022
The
question
of
the
origin
coronavirus
spread
like
wildfire
ever
since
it
wreaked
havoc
among
humankind,
and
scientific
community
has
worked
tirelessly
to
trace
history
virus.
In
this
review,
we
have
tried
compile
relevant
literature
pertaining
different
theories
SARS-CoV-2,
hopefully
without
any
bias,
strongly
support
zoonotic
infamous
SARS-CoV-2
in
bats
its
transfer
human
beings
through
most
probable
evolutionary
hosts,
pangolins
minks.
We
also
contemporary
'Circulation
Model'
that
simply
mirrors
concept
evolution
explain
virus
which,
authors
believe,
is
rational
school
thought.
recent
variant
Omicron,
been
taken
as
an
example
clarify
concept.
recommend
refer
model
for
further
understanding
delving
deep
into
mystery
SARS-CoV-2.
The MIT Press eBooks,
Journal Year:
2024,
Volume and Issue:
unknown
Published: Feb. 6, 2024
How
humanity
brought
about
the
climate
crisis
by
departing
from
its
evolutionary
trajectory
15,000
years
ago—and
how
we
can
use
principles
to
save
ourselves
worst
outcomes.
Despite
efforts
sustain
civilization,
faces
existential
threats
overpopulation,
globalized
trade
and
travel,
urbanization,
global
change.
In
A
Darwinian
Survival
Guide,
Daniel
Brooks
Salvatore
Agosta
offer
a
novel—and
hopeful—perspective
on
meet
these
tremendous
challenges
changing
discourse
sustainability
survival.
evolution,
world's
only
theory
of
survival,
is
means
which
biosphere
has
persisted
renewed
itself
following
past
environmental
perturbations,
it
never
failed,
they
explain.
Even
in
aftermath
mass
extinctions,
enough
survivors
remain
with
potential
produce
new
diversified
biosphere.
Drawing
their
expertise
as
field
biologists,
trace
path
early
days
humans
through
Late
Pleistocene
beginning
Anthropocene
all
way
Great
Acceleration
technological
around
1950,
demonstrating
our
creative
capacities
have
allowed
survive.
However,
constant
conflict
without
resolution
made
not
unsustainable,
but
unsurvivable.
Guided
four
laws
biotics,
authors
explain
should
interact
rest
each
other
accordance
principles.
They
reveal
middle
ground
between
apocalypse
utopia,
two
options:
alter
behavior
now
at
great
expense
extend
civilization
or
fail
act
rebuild
those
same
If
take
latter,
then
immediate
goal
ought
focus
preserving
many
humanity's
positive
achievements—from
high
technology
art—as
possible
shorten
time
needed
rebuild.
Transboundary and Emerging Diseases,
Journal Year:
2022,
Volume and Issue:
69(5)
Published: April 12, 2022
The
unusual
genetic
diversity
of
the
Omicron
strain
has
led
to
speculation
about
its
origin.
mathematical
modelling
platform
developed
for
Stockholm
Paradigm
(SP)
indicates
strongly
that
it
retro-colonized
humans
from
an
unidentified
nonhuman
mammal,
likely
originally
infected
by
humans.
relationship
between
and
all
other
SARS-CoV-2
variants
oscillations
among
hosts,
a
core
part
SP.
Such
result
emergence
novel
following
colonization
new
replenishing
expanding
risk
space
disease
emergence.
SP
predicts
pathogens
colonize
hosts
using
pre-existing
capacities.
Those
events
are
thus
predictable
certain
extent.
Novel
emerge
after
not
predictable.
This
makes
imperative
take
proactive
measures
anticipating
emerging
infectious
diseases
(EID)
mitigating
their
impact.
suggests
policy
protocol,
DAMA,
accomplish
this
goal.
DAMA
comprises:
DOCUMENT
detect
before
they
in
places
or
hosts;
ASSESS
determine
risk;
MONITOR
changes
pathogen
populations
increase
outbreaks
ACT
prevent
when
possible
minimize
impact
occur.
Systematic Biology,
Journal Year:
2023,
Volume and Issue:
72(4), P. 912 - 924
Published: April 25, 2023
Abstract
Speciation
via
host-switching
is
a
macroevolutionary
process
that
emerges
from
microevolutionary
dynamic
where
individual
parasites
switch
hosts,
establish
new
association,
and
reduce
reproductive
contact
with
the
original
parasite
lineage.
Phylogenetic
distance
geographic
distribution
of
hosts
have
been
shown
to
be
determinants
capacity
opportunity
change
hosts.
Although
speciation
has
reported
in
many
host-parasite
systems,
its
on
individual,
population
community
levels
poorly
understood.
Here
we
propose
theoretical
model
simulate
evolution
considering
events
scale,
taking
into
account
history
evaluate
how
can
affect
ecological
evolutionary
patterns
empirical
communities
at
regional
local
scales.
In
model,
individuals
under
variable
intensity
their
driven
by
mutation
genetic
drift.
Mating
sexual
only
are
sufficiently
similar
produce
offspring.
We
assumed
occurs
same
time
scale
as
decreases
host
species
differentiate.
Ecological
were
characterized
turnover
among
species,
tree
imbalance
respectively.
found
range
reproduces
observed
communities.
Our
results
showed
decreased
increased,
low
variation
replications.
On
other
hand,
wide
non-monotonic
tendency.
concluded
was
sensitive
stochastic
events,
whereas
may
good
indicator
host-switching.
corresponded
higher
when
compared
communities,
highlighting
spatial
limitation
for
[Dispersal
parasites,
interaction,
phylogenetic
conservatism,
structure.]
Journal of Evolutionary Biology,
Journal Year:
2024,
Volume and Issue:
37(12), P. 1488 - 1498
Published: March 21, 2024
Abstract
The
processes
that
generate
biodiversity
start
on
a
microevolutionary
scale,
where
each
individual’s
history
can
impact
the
species’
history.
This
manuscript
presents
theoretical
study
examines
macroevolutionary
patterns
emerge
from
dynamics
of
populations
inhabiting
two
patches.
model
is
neutral,
meaning
neither
survival
nor
reproduction
depends
fixed
genotype,
yet
individuals
must
have
minimal
genetic
similarity
to
reproduce.
We
used
historical
sea
level
oscillation
over
past
800
thousand
years
hypothesize
periods
when
could
migrate
one
patch
another.
In
our
study,
we
keep
track
speciation
and
extinction
event,
build
complete
extant
phylogenies,
characterize
regarding
phylogeny
balance,
acceleration
speciation,
crown
age.
also
evaluate
ecological
patterns:
richness,
beta
diversity,
species
distribution
symmetry.
balance
be
sign
mode,
contrasting
induced
by
migration
isolation
(vicariance).
process
affected
geographical
barriers
duration
period,
with
high
times
leading
accelerated
speciation.
report
correlation
between
show
it
decreases
time
spent
in
isolation.
discuss,
light
results,
challenge
integrating
present-time
community
ecology
patterns.
MANTER Journal of Parasite Biodiversity,
Journal Year:
2022,
Volume and Issue:
unknown
Published: May 24, 2022
Humans
represent
ecological
super-spreaders
in
the
dissemination
and
introduction
of
pathogens.
These
processes,
consistent
with
dynamics
Stockholm
paradigm,
are
exemplified
origin
globalized
distributions
SARS-CoV-2
since
initial
recognition
central
Asia
during
2019
2020.
SARS-like
viruses
not
widespread
mammals
but
appear
chiropterans.
Bats
isolated
ecologically
from
most
other
assemblages
terrestrial
systems.
may
be
stepping-stone
hosts
for
broad
global
wider
infection
(given
opportunity)
among
diverse
which
host
viral
capacity
compatible.
Human
globalization
mediated
insertion
ecosystems
along
primary
secondary
pathways
initially
localized
to
regional
circulation
across
continents.
Origins
persistence
cycles
involving
variants
transmission
potential
exposure
(retrocolonization)
people
occurs
on
multidirectional
pathways.
were
responsible
breakdown
isolation
virus
that
facilitated
colonization
events
chiropterans
mammals.
In
absence
these
human
drivers,
environmental
or
interfaces
(boundary
zones
habitats)
limiting
distribution
unlikely
have
been
crossed,
leaving
a
assemblage
(Sarbecovirus)
remaining
relatively
hidden
southeast
Asia.
MANTER Journal of Parasite Biodiversity,
Journal Year:
2022,
Volume and Issue:
unknown
Published: Nov. 5, 2022
Globally,
humanity
is
coming
to
recognize
the
magnitude
of
interactive
crisis
for
emerging
infectious
disease
(EID).
Strategies
coping
with
EID
have
been
largely
in
form
reactive
measures
response.
The
DAMA
protocol
(Document,
Assess,
Monitor,
Act),
operational
policy
extension
Stockholm
paradigm,
constitutes
a
preventive/proactive
dimension
those
efforts.
aimed
at
focusing
and
extending
human
material
resources
devoted
accelerating
wave
EID.
integrative,
combining
efforts
strategically
document
distribution
complex
pathogen
host
assemblages
biosphere
context
dynamic
environmental
interfaces
that
provide
opportunities
exchange
emergence.
Movement
habitats
animals
(a
breakdown
ecological
isolation)
catalyzed
by
climate
change
broader
anthropogenic
trajectories
disruption
landscape
opportunity
Evolutionarily
ecologically
conserved
capacities
exploitation
host-based
allow
pathogens
persist
one
place
or
among
particular
spectrum
hosts
insights
predict
outcomes
persistence
emergence
novel
conditions
across
changing
interfaces.
combine
“boots
on
ground”
contributions
citizen
scientists
working
field
biologists
development
application
sophisticated
archival
repositories,
bioinformatics,
molecular
biology,
satellite
surveillance.
focus
anticipation,
mitigation,
prevention
through
knowledge
present
environment
actions
necessary
diminish
risk
space
their
can
be
an
effective
strategy
buying
time
arena
socioeconomic
disturbance
expanding
linked
future
change.
Information
+
action
=
prediction
lives
saved
realm
This
article
has
produced
support
appreciation
Gábor
Földvári
Institute
Evolution,
Centre
Ecological
Research,
Eco-Epidemiology,
National
Laboratory
Health
Security
(both
located
1121
Budapest,
Konkoly-Thege
Miklós
út
29-33,
Hungary).
Through
his
untiring
efforts,
team
building,
leadership,
he
secured
first
EU-wide
research
grant.
work
was
supported
Development
Innovation
Office
Hungary
(RRF-2.3.1-21-2022-00006)
COST
Action
CA21170
“Prevention,
anticipation
mitigation
tick-borne
applying
(PRAGMATICK),”
which
represent
funded
apply
principles
protocol.
MANTER Journal of Parasite Biodiversity,
Journal Year:
2022,
Volume and Issue:
unknown
Published: Dec. 23, 2022
Pathogens
and
their
hosts
are
embedded
within
the
larger
biosphere,
what
Darwin
called
“entangled
bank.”
Emerging
infectious
disease
occurs
when
a
parasite
“switches”
to
new
host.
Understanding
dynamics
of
emerging
requires
understanding
host-switching,
which
more
general
how
biosphere
its
constituent
members
cope
conditions
change.
The
Stockholm
paradigm
is
an
integrative
evolutionary
framework
that
describes
living
systems
with
change
by
oscillating
between
exploiting
exploring
geographical
functional
dimensions
environments.
It
combines
organismal
capacity,
ecological
opportunity,
repeated
external
perturbations
drive
interaction
capacity
catalyzing
entangled
bank.
makes
clear
expected
outcome
expression
same
potential
governs
response
rest
MANTER Journal of Parasite Biodiversity,
Journal Year:
2022,
Volume and Issue:
unknown
Published: Nov. 5, 2022
The
emerging
infectious
disease
(EID)
crisis
represents
an
immediate
existential
threat
to
modern
humanity.
Current
policies
aimed
at
coping
with
the
EID
are
ineffective
and
unsustainably
expensive.
They
have
failed
because
they
based
on
a
scientific
paradigm
that
produced
parasite
paradox.
Stockholm
(SP)
resolves
paradox
by
integrating
four
elements
of
evolutionary
biology:
ecological
fitting,
sloppy
fitness
space,
coevolution,
responses
environmental
perturbations.
It
explains
why
how
occurs
is
expanding
what
happens
after
emerges
sets
stage
for
future
EIDs.
SP
provides
number
critical
insights
changing
public
policy
in
manner
allows
us
begin
effective
manner.
hope
we
can
anticipate
EIDs
prevent
them
or
least
mitigate
their
impacts.
This
article
has
been
support
appreciation
efforts
Gábor
Földvári
Institute
Evolution,
Centre
Ecological
Research,
Eco-Epidemiology,
National
Laboratory
Health
Security
(both
located
1121
Budapest,
Konkoly-Thege
Miklós
út
29-33,
Hungary).
Through
his
untiring
efforts,
team
building,
leadership,
he
secured
first
EU-wide
research
grant.
work
was
supported
Development
Innovation
Office
Hungary
(RRF-2.3.1-21-2022-00006)
COST
Action
CA21170
“Prevention,
anticipation
mitigation
tick-borne
risk
applying
DAMA
protocol
(PRAGMATICK),”
which
represent
funded
apply
principles
protocol.