Scientific Reports,
Journal Year:
2024,
Volume and Issue:
14(1)
Published: Feb. 7, 2024
Abstract
Exploring
how
the
emergent
functional
connectivity
(FC)
relates
to
underlying
anatomy
(structural
connectivity,
SC)
is
one
of
major
goals
modern
neuroscience.
At
macroscale
level,
no
one-to-one
correspondence
between
structural
and
links
seems
exist.
And
we
posit
that
better
understand
their
coupling,
two
key
aspects
should
be
considered:
directionality
connectome
limitations
in
explaining
networks
functions
through
an
undirected
measure
such
as
FC.
Here,
employed
accurate
directed
SC
mouse
brain
acquired
viral
tracers
compared
it
with
single-subject
effective
(EC)
matrices
derived
from
a
dynamic
causal
model
(DCM)
applied
whole-brain
resting-state
fMRI
data.
We
analyzed
deviates
EC
quantified
respective
couplings
by
conditioning
on
strongest
links.
found
when
links,
obtained
coupling
follows
unimodal-transmodal
hierarchy.
Whereas
reverse
not
true,
there
are
strong
within
high-order
cortical
areas
corresponding
This
mismatch
even
more
clear
across
networks;
only
sensory
motor
did
observe
connections
align
terms
both
strength.
Nature Communications,
Journal Year:
2021,
Volume and Issue:
12(1)
Published: Oct. 19, 2021
Abstract
Postmortem
studies
have
revealed
increased
density
of
excitatory
synapses
in
the
brains
individuals
with
autism
spectrum
disorder
(ASD),
a
putative
link
to
aberrant
mTOR-dependent
synaptic
pruning.
ASD
is
also
characterized
by
atypical
macroscale
functional
connectivity
as
measured
resting-state
fMRI
(rsfMRI).
These
observations
raise
question
whether
excess
causes
ASD.
Using
rsfMRI,
electrophysiology
and
silico
modelling
Tsc2
haploinsufficient
mice,
we
show
that
spine
associated
-like
stereotypies
cortico-striatal
hyperconnectivity.
deficits
are
completely
rescued
pharmacological
inhibition
mTOR.
Notably,
further
demonstrate
children
idiopathic
exhibit
analogous
cortical-striatal
hyperconnectivity,
document
this
fingerprint
enriched
for
ASD-dysregulated
genes
interacting
mTOR
or
Tsc2.
Finally,
identified
transcriptomic
signature
predominantly
expressed
subset
autism,
thereby
defining
segregable
subtype.
Our
findings
causally
mTOR-related
pathology
large-scale
network
aberrations,
revealing
unifying
multi-scale
framework
mechanistically
reconciles
developmental
synaptopathy
hyperconnectivity
autism.
Current Biology,
Journal Year:
2022,
Volume and Issue:
32(3), P. 631 - 644.e6
Published: Jan. 7, 2022
Human
imaging
studies
have
shown
that
spontaneous
brain
activity
exhibits
stereotypic
spatiotemporal
reorganization
in
awake,
conscious
conditions
with
respect
to
minimally
states.
However,
whether
and
how
this
phenomenon
can
be
generalized
lower
mammalian
species
remains
unclear.
Leveraging
a
robust
protocol
for
resting-state
fMRI
(rsfMRI)
mapping
non-anesthetized,
head-fixed
mice,
we
investigated
functional
network
topography
dynamic
structure
of
wakeful
animals.
We
found
rsfMRI
networks
the
awake
state,
while
anatomically
comparable
those
observed
under
anesthesia,
are
topologically
configured
maximize
interregional
communication,
departing
from
underlying
community
mouse
axonal
connectome.
further
report
animals
unique
dynamics
characterized
by
state-dependent,
dominant
occurrence
coactivation
patterns
encompassing
prominent
participation
arousal-related
forebrain
nuclei
anti-coordination
between
visual-auditory
polymodal
cortical
areas.
finally
show
mice
stereotypical
temporal
structure,
which
state-dominant
as
attractors.
These
findings
suggest
is
critically
shaped
state-specific
involvement
basal
arousal
systems
document
its
recapitulates
distinctive,
evolutionarily
relevant
principles
predictive
states
higher
species.
Nature Communications,
Journal Year:
2022,
Volume and Issue:
13(1)
Published: Feb. 25, 2022
Abstract
While
shaped
and
constrained
by
axonal
connections,
fMRI-based
functional
connectivity
reorganizes
in
response
to
varying
interareal
input
or
pathological
perturbations.
However,
the
causal
contribution
of
regional
brain
activity
whole-brain
fMRI
network
organization
remains
unclear.
Here
we
combine
neural
manipulations,
resting-state
vivo
electrophysiology
probe
how
inactivation
a
cortical
node
causally
affects
brain-wide
coupling
mouse.
We
find
that
chronic
inhibition
medial
prefrontal
cortex
(PFC)
via
overexpression
potassium
channel
increases
between
inhibited
area
its
direct
thalamo-cortical
targets.
Acute
chemogenetic
PFC
produces
analogous
patterns
overconnectivity.
Using
electrophysiology,
enhances
low
frequency
(0.1–4
Hz)
oscillatory
power
suppression
firing
not
phase-locked
slow
rhythms,
resulting
increased
δ
band
coherence
areas
exhibit
These
results
provide
evidence
can
counterintuitively
increase
enhanced,
less-localized
processes.
Nature Neuroscience,
Journal Year:
2023,
Volume and Issue:
26(7), P. 1281 - 1294
Published: June 19, 2023
Abstract
Dynamics
and
functions
of
neural
circuits
depend
on
interactions
mediated
by
receptors.
Therefore,
a
comprehensive
map
receptor
organization
across
cortical
regions
is
needed.
In
this
study,
we
used
in
vitro
autoradiography
to
measure
the
density
14
neurotransmitter
types
109
areas
macaque
cortex.
We
integrated
data
with
anatomical,
genetic
functional
connectivity
into
common
space.
uncovered
principal
gradient
expression
per
neuron.
This
aligns
hierarchy
from
sensory
cortex
higher
cognitive
areas.
A
second
gradient,
driven
serotonin
5-HT
1A
receptors,
peaks
anterior
cingulate,
default
mode
salience
networks.
found
similar
pattern
human
brain.
Thus,
may
be
promising
translational
model
serotonergic
processing
disorders.
The
gradients
enable
rapid,
reliable
information
slow,
flexible
integration
Nature Communications,
Journal Year:
2023,
Volume and Issue:
14(1)
Published: Feb. 6, 2023
Abstract
Spontaneous
fluctuations
in
functional
magnetic
resonance
imaging
(fMRI)
signals
correlate
across
distant
brain
areas,
shaping
functionally
relevant
intrinsic
networks.
However,
the
generative
mechanism
of
fMRI
signal
correlations,
and
particular
link
with
locally-detected
ultra-slow
oscillations,
are
not
fully
understood.
To
investigate
this
link,
we
record
ultrafast
ultrahigh
field
(9.4
Tesla,
temporal
resolution
=
38
milliseconds)
from
female
rats
three
anesthesia
conditions.
Power
at
frequencies
extending
up
to
0.3
Hz
is
detected
consistently
rat
brains
modulated
by
level.
Principal
component
analysis
reveals
a
repertoire
modes,
which
transient
oscillations
organize
fixed
phase
relationships
distinct
cortical
subcortical
structures.
Oscillatory
modes
found
vary
between
conditions,
resonating
faster
under
medetomidine
sedation
reducing
both
number,
frequency,
duration
addition
isoflurane.
Peaking
power
within
clear
anatomical
boundaries,
these
oscillatory
point
an
emergent
systemic
property.
This
work
provides
additional
insight
into
origin
organizing
principles
underpinning
spontaneous
long-range
connectivity.
Nature Communications,
Journal Year:
2024,
Volume and Issue:
15(1)
Published: Jan. 3, 2024
Abstract
Large-scale
functional
networks
have
been
characterized
in
both
rodent
and
human
brains,
typically
by
analyzing
fMRI-BOLD
signals.
However,
the
relationship
between
underlying
neural
activity
is
complex
incompletely
understood,
which
poses
challenges
to
interpreting
network
organization
obtained
using
this
technique.
Additionally,
most
work
has
assumed
a
disjoint
(i.e.,
brain
regions
belong
one
only
network).
Here,
we
employ
wide-field
Ca
2+
imaging
simultaneously
with
mice
expressing
GCaMP6f
excitatory
neurons.
We
determine
cortical
discovered
each
modality
mixed-membership
algorithm
test
hypothesis
that
exhibit
overlapping
organization.
find
there
considerable
overlap
(both
modalities)
addition
Our
results
show
multiple
BOLD
are
detected
via
signals,
determined
low-frequency
signals
modestly
more
similar
networks.
In
addition,
principal
gradient
of
connectivity
nearly
identical
for
Despite
similarities,
important
differences
also
across
modalities,
such
as
measures
strength
diversity.
conclusion,
uncovers
mouse
reflects
several,
but
not
all,
properties
observed
Neuron,
Journal Year:
2020,
Volume and Issue:
109(3), P. 545 - 559.e8
Published: Dec. 7, 2020
The
evolutionarily
conserved
default
mode
network
(DMN)
is
a
distributed
set
of
brain
regions
coactivated
during
resting
states
that
vulnerable
to
disorders.
How
disease
affects
the
DMN
unknown,
but
detailed
anatomical
descriptions
could
provide
clues.
Mice
offer
an
opportunity
investigate
structural
connectivity
across
spatial
scales
with
cell-type
resolution.
We
co-registered
maps
from
functional
magnetic
resonance
imaging
and
axonal
tracing
experiments
into
3D
Allen
mouse
reference
atlas.
find
consists
preferentially
interconnected
cortical
regions.
As
population,
layer
2/3
(L2/3)
neurons
project
almost
exclusively
other
regions,
whereas
L5
in
out
DMN.
In
retrosplenial
cortex,
core
region,
we
identify
two
projection
types
differentiated
by
in-
or
out-DMN
targets,
laminar
position,
gene
expression.
These
results
multi-scale
description
correlates
Molecular Psychiatry,
Journal Year:
2021,
Volume and Issue:
26(12), P. 7610 - 7620
Published: Aug. 11, 2021
Autism
Spectrum
Disorder
(ASD)
is
characterized
by
substantial,
yet
highly
heterogeneous
abnormalities
in
functional
brain
connectivity.
However,
the
origin
and
significance
of
this
phenomenon
remain
unclear.
To
unravel
ASD
connectopathy
relate
it
to
underlying
etiological
heterogeneity,
we
carried
out
a
bi-center
cross-etiological
investigation
fMRI-based
connectivity
mouse,
which
specific
ASD-relevant
mutations
can
be
isolated
modeled
minimizing
environmental
contributions.
By
performing
brain-wide
mapping
across
16
mouse
mutants,
show
that
different
ASD-associated
etiologies
cause
broad
spectrum
connectional
diverse,
often
diverging,
signatures
are
recognizable.
Despite
identified
alterations
could
classified
into
four
subtypes
discrete
network
dysfunction.
Our
findings
variability
key
determinant
heterogeneity
ASD,
hence
reconciling
conflicting
clinical
populations.
The
identification
etiologically-relevant
improve
diagnostic
label
accuracy
non-syndromic
population
paves
way
for
personalized
treatment
approaches.
Science Advances,
Journal Year:
2022,
Volume and Issue:
8(17)
Published: April 29, 2022
The
default
mode
network
(DMN)
of
the
brain
is
functionally
associated
with
a
wide
range
behaviors.
In
this
study,
we
used
functional
magnetic
resonance
imaging
(fMRI),
positron
emission
tomography
(PET),
and
spectral
fiber
photometry
to
investigate
selective
neuromodulatory
effect
norepinephrine
(NE)–releasing
noradrenergic
neurons
in
locus
coeruleus
(LC)
on
mouse
DMN.
Chemogenetic-induced
tonic
LC
activity
decreased
cerebral
blood
volume
(CBV)
glucose
uptake
increased
synchronous
low-frequency
fMRI
within
frontal
cortices
Fiber
results
corroborated
these
findings,
showing
that
LC-NE
activation
induced
NE
release,
enhanced
calcium-weighted
neuronal
spiking,
reduced
CBV
anterior
cingulate
cortex.
These
data
suggest
alters
conventional
coupling
between
We
also
demonstrated
chemogenetic
strengthened
connectivity
DMN,
was
causally
mediated
by
modulatory
inputs
from
retrosplenial
hippocampal
regions
association
Frontiers in Neuroscience,
Journal Year:
2022,
Volume and Issue:
16
Published: March 8, 2022
Resting-state
functional
magnetic
resonance
imaging
(rs-fMRI),
which
measures
the
spontaneous
fluctuations
in
blood
oxygen
level-dependent
(BOLD)
signal,
is
increasingly
utilized
for
investigation
of
brain's
physiological
and
pathological
activity.
Rodents,
as
a
typical
animal
model
neuroscience,
play
an
important
role
studies
that
examine
neuronal
processes
underpin
BOLD
signal
connectivity
results.
Translating
this
knowledge
from
rodents
to
humans
requires
basic
similarities
differences
across
species
terms
both
resulting
connectivity.
This
review
begins
by
examining
anatomical
features,
acquisition
parameters,
preprocessing
techniques,
factors
contribute
Homologous
networks
are
compared
species,
aspects
such
topography
global
relationship
between
structural
examined.
Time-varying
features
connectivity,
obtained
sliding
windowed
approaches,
quasi-periodic
patterns,
coactivation
species.
Applications
demonstrating
use
rs-fMRI
translational
tool
cross-species
analysis
discussed,
with
emphasis
on
neurological
psychiatric
disorders.
Finally,
open
questions
presented
encapsulate
future
direction
field.