Reference genome provide insights into sex determination of silver aworana (Osteoglossum bicirrhosum)
Yi Liu,
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Chao Bian,
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Ka Yan
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et al.
BMC Biology,
Journal Year:
2025,
Volume and Issue:
23(1)
Published: Jan. 29, 2025
Silver
arowana
(Osteoglossum
bicirrhosum)
is
a
basal
fish
species
with
sexual
monomorphism,
while
its
sex
determination
mechanism
has
been
poorly
understood,
posing
significant
challenge
to
captive
breeding
efforts.
We
constructed
two
high-quality
chromosome-level
genome
assemblies
for
both
female
and
male
silver
arowana,
scaffold
N50
values
over
10
Mb.
Combining
re-sequencing
data
of
109
individuals,
we
identified
female-specific
region,
which
was
localized
in
non-coding
i.e.,
around
26-kb
upstream
foxl2
gene
(encoding
forkhead
box
L2).
Its
strong
interaction
the
neighboring
on
same
chromosome
suggests
as
candidate
sex-related
arowana.
subsequently
propose
complex
network
process
acting
central
contributor.
Transcriptome
sequencing
gonads
support
our
hypothesis
that
regulation
can
be
influenced
by
spatial
proximity
fragment,
thereby
promoting
ovarian
function
or
inhibiting
testicular
stimulate
gonadal
differentiation.
Furthermore,
found
chromosomes
homomorphic
potentially
recent
origin,
linkage
disequilibrium
analysis
proved
minor
recombination
suppression.
These
results
taken
together
serve
crucial
foundation
conducting
extensive
investigations
evolution
differentiation
sex-determining
mechanisms,
well
emergence
development
various
fishes.
Language: Английский
Gonadal sex determination in vertebrates: rethinking established mechanisms
Development,
Journal Year:
2025,
Volume and Issue:
152(6)
Published: March 15, 2025
ABSTRACT
Sex
determination
and
differentiation
are
fundamental
processes
that
not
only
essential
for
fertility
but
also
influence
the
development
of
many
other
organs,
hence,
important
species
diversity
survival.
In
mammals,
sex
is
determined
by
inheritance
an
X
or
a
Y
chromosome
from
father.
The
harbours
testis-determining
gene
SRY,
it
has
long
been
thought
its
absence
sufficient
ovarian
development.
Consequently,
pathway
treated
as
default
pathway,
in
sense
ovaries
do
have
need
female-determining
factor.
Recently,
factor
identified
mouse
master
regulator
Interestingly,
this
scenario
was
predicted
early
1983.
Review,
we
discuss
model
1983,
how
mechanisms
genes
currently
known
to
be
mammals
changed
supported
model,
finally,
reflect
on
what
these
findings
might
mean
vertebrates.
Language: Английский
Unveiling the role of FOXL2 in female differentiation and disease: a comprehensive review
Jia He,
No information about this author
Zican Wang,
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Lici Yang
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et al.
Biology of Reproduction,
Journal Year:
2025,
Volume and Issue:
unknown
Published: Feb. 20, 2025
Abstract
Ovarian
differentiation
relies
on
the
accurate
and
orderly
expression
of
numerous
related
genes.
Forkhead
box
protein
L2
(FOXL2)
is
one
earliest
ovarian
markers
transcription
factors.
In
sex
determination,
FOXL2
maintains
female
pathway
by
inhibiting
male
genes,
including
SOX9
SF1.
addition,
promotes
synthesis
follicle-stimulating
hormone
anti-Müllerian
to
support
follicle
development.
Mutations
in
are
associated
with
reproductive
diseases.
A
comprehensive
in-depth
study
provides
novel
strategies
for
diagnosis
treatment
such
This
review
discusses
mechanism
maintenance,
synthesis,
disease
occurrence
reveals
role
as
a
central
factor
development
fertility
maintenance.
will
serve
reference
identifying
targets
other
regulatory
factors
interacting
determination
Language: Английский
FOXL2 drives the differentiation of supporting gonadal cells in early ovarian development
Laura Danti,
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Karolina Lundin,
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Petra Nedeczey-Ruzsák
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et al.
Reproductive Biology and Endocrinology,
Journal Year:
2025,
Volume and Issue:
23(1)
Published: March 18, 2025
Abstract
Background
Forkhead
box
L2
(
FOXL2
)
is
a
transcription
factor
from
the
forkhead
family
primarily
expressed
in
pituitary,
ovaries,
and
eyelids.
Human
mutations
cause
blepharophimosis,
ptosis,
epicanthus
inversus
syndrome
(BPES),
which
can
be
associated
with
primary
ovarian
insufficiency,
indirectly
linked
differences
of
sex
development
(DSD).
Animal
studies
have
shown
crucial
role
that
plays
development,
function,
maintenance
ovary
as
well
determination.
However,
specific
early
human
somatic
cell
largely
unknown.
Methods
In
this
study,
we
utilised
CRISPR/Cas9
genome
activation
previously
published
in-house
14-day
gonadal
differentiation
protocol
to
study
.
Results
Our
results
demonstrate
downregulates
coelomic
epithelial
markers
GATA4
LHX9
,
female
RSPO1
WNT4
male
SOX9
NR0B1
DHH
The
differentially
genes
were
mostly
Kyoto
encyclopaedia
genomes
(KEGG)
pathways
relating
adhesion
molecules
gene
ontology
(GO)
extracellular
matrix
junction
formation.
Furthermore,
comparative
analysis
existing
single
RNA
sequencing
data
vivo-derived
samples
elucidated
initiates
downregulation
UPK3B
at
day
6.
By
8,
ARX
GATA2
are
transiently
upregulated
by
induction
then
downregulated
LGR5
TSPAN8
OSR1
TAC1
become
upregulated.
Conclusions
These
findings
suggest
facilitates
exit
differentiating
cells
epithelium
initially
drives
them
towards
transitional
identity
before
progressing
into
supporting
gonadal-like
cells.
significantly
advance
our
understanding
normal
used
basis
elucidate
pathological
underlying
BPES.
Language: Английский
Obox1 deficiency impairs fertility in female mice
Li Wu,
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Jiacheng Shen,
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Zhenzhen Hou
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et al.
Fundamental Research,
Journal Year:
2025,
Volume and Issue:
unknown
Published: April 1, 2025
Language: Английский
Divergent regulatory element programs steer sex-specific supporting cell differentiation along mouse gonadal development
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Dec. 12, 2024
Abstract
Gonadal
sex
determination
relies
on
tipping
a
delicate
balance
involving
the
activation
and
repression
of
several
transcription
factors
signalling
pathways.
This
is
likely
mediated
by
numerous
non-coding
regulatory
elements
that
shape
sex-specific
transcriptomic
programs.
To
explore
dynamics
these
in
detail,
we
performed
paired
time-series
chromatin
accessibility
assays
pre-granulosa
Sertoli
cells
throughout
their
development
embryo,
making
use
new
existing
mouse
reporter
lines.
Regulatory
were
associated
with
putative
target
genes
linkage
analysis,
this
was
complemented
verified
experimentally
using
promoter
capture
Hi-C.
We
identified
factor
motifs
enriched
along
occupancy,
pinpointing
LHX9/EMX2
as
potentially
critical
regulators
ovarian
development.
Variations
DNA
sequence
are
to
be
responsible
for
many
unexplained
cases
individuals
Differences
Sex
Development.
Teaser
Multiomics
analysis
revealed
gonadal
determination.
Language: Английский