Photochemically Triggered, Transient, and Oscillatory Transcription Machineries Guide Temporal Modulation of Fibrinogenesis DOI Creative Commons

Jiantong Dong,

Itamar Willner

Journal of the American Chemical Society, Journal Year: 2024, Volume and Issue: unknown

Published: Dec. 31, 2024

Photochemically triggered, transient, and temporally oscillatory-modulated transcription machineries are introduced. The resulting dynamic circuits implemented to guide photochemically oscillatory modulation of thrombin toward temporal control over fibrinogenesis. One system describes the assembly a reaction module leading triggered formation an active machinery that, in presence RNase H, guides transient activation A second introduces photochemical triggering circuit consisting two coupled machineries, depletion intermediate product. concept is applied develop leads generation anti-thrombin aptamer-modified oscillating product induces rhythmic inhibition thrombin, accompanied by cyclic deactivation fibrinogenesis process. operation computational kinetic models, allowing predict behaviors under different auxiliary conditions. phototriggered circuit-guided examined physiological-like conditions within human plasma environment.

Language: Английский

Random Sanitization in DNA information storage using CRISPR-Cas12a DOI Open Access
Hongyu Shen, Zhi Weng, Haipei Zhao

et al.

bioRxiv (Cold Spring Harbor Laboratory), Journal Year: 2024, Volume and Issue: unknown

Published: Aug. 5, 2024

Abstract DNA information storage provides an excellent solution for metadata due to its high density, programmability, and long-term stability. However, current research in primarily focuses on the processes of storing reading data, lacking comprehensive solutions secure wiping. Herein, we present a method random sanitization using CRISPR-Cas12a (RSDISC) based precise control thermodynamic energy primer-template hybridization. We utilize collateral cleavage (trans-activity) single-stranded (ssDNA) by achieve selective files metadata. This enables ssDNA degradation with different GC content, lengths, secondary structures efficiency up 99.9% 28,258 oligonucleotides within one round. demonstrate that number erasable could reach 10 11.7 model hybridization efficiency. Overall, RSDISC approach set foundation encryption, file classification, memory deallocation accurate data storage.

Language: Английский

Citations

0

Turning Waste into Wealth: Enzyme-Activated DNA Sensor Based on Reactant Recycle for Spatially Selective Imaging MicroRNA toward Target Cells DOI
Yaokun Xia,

Guomin Ju,

Yongting Zhou

et al.

Analytica Chimica Acta, Journal Year: 2024, Volume and Issue: 1337, P. 343557 - 343557

Published: Dec. 16, 2024

Language: Английский

Citations

0

SlipChip Enables the Integration of CRISPR-Cas12a and RPA for Fast and Stand-Alone HPV Detection DOI

Yin Zhao,

Zheyu Li, Tao Li

et al.

Analytical Chemistry, Journal Year: 2024, Volume and Issue: unknown

Published: Dec. 18, 2024

Human papillomavirus (HPV) screening is vital for the early detection and prevention of cervical cancer. However, existing methods often face challenges related to speed, simplicity, multiplexing, especially in resource-limited settings. Here we developed a portable SlipChip-based multiplexed rapid nucleic acid testing platform, named SMART, designed simultaneously detect HPV16 HPV18. SMART allows seamless integration RPA Cas12a assays on SlipChip includes heating membrane regulate on-chip assay temperatures. This operate as stand-alone platform without additional control instruments. The also features an All-in-One imaging mode data acquisition, enhancing its performance. enables sensitive HPV18 DNA across multiple samples just 36 min with limit approximately 6 copies per reaction. Testing 56 clinical at risk HPV infection validated SMART's performance, showing 97.7% sensitivity 100% specificity. In summary, offers system capable rapidly distinguishing between two most harmful subtypes, showcasing significant potential rapid, various applications.

Language: Английский

Citations

0

Photochemically Triggered, Transient, and Oscillatory Transcription Machineries Guide Temporal Modulation of Fibrinogenesis DOI Creative Commons

Jiantong Dong,

Itamar Willner

Journal of the American Chemical Society, Journal Year: 2024, Volume and Issue: unknown

Published: Dec. 31, 2024

Photochemically triggered, transient, and temporally oscillatory-modulated transcription machineries are introduced. The resulting dynamic circuits implemented to guide photochemically oscillatory modulation of thrombin toward temporal control over fibrinogenesis. One system describes the assembly a reaction module leading triggered formation an active machinery that, in presence RNase H, guides transient activation A second introduces photochemical triggering circuit consisting two coupled machineries, depletion intermediate product. concept is applied develop leads generation anti-thrombin aptamer-modified oscillating product induces rhythmic inhibition thrombin, accompanied by cyclic deactivation fibrinogenesis process. operation computational kinetic models, allowing predict behaviors under different auxiliary conditions. phototriggered circuit-guided examined physiological-like conditions within human plasma environment.

Language: Английский

Citations

0