Small molecule inhibitors targeting the cancers DOI Creative Commons
Guihong Liu, Tao Chen, Xin Zhang

et al.

MedComm, Journal Year: 2022, Volume and Issue: 3(4)

Published: Oct. 13, 2022

Compared with traditional therapies, targeted therapy has merits in selectivity, efficacy, and tolerability. Small molecule inhibitors are one of the primary therapies for cancer. Due to their advantages a wide range targets, convenient medication, ability penetrate into central nervous system, many efforts have been devoted developing more small inhibitors. To date, 88 approved by United States Food Drug Administration treat cancers. Despite remarkable progress, cancer treatment still face obstacles, such as low response rate, short duration response, toxicity, biomarkers, resistance. better promote development targeting cancers, we comprehensively reviewed involved all agents pivotal drug candidates clinical trials arranged signaling pathways classification We discussed lessons learned from these agents, proper strategies overcome resistance arising different mechanisms, combination concerned Through our review, hoped provide insights perspectives research treatment.

Language: Английский

Illuminating the dark phosphoproteome DOI Open Access
Elise J. Needham, Benjamin L. Parker,

Timur Burykin

et al.

Science Signaling, Journal Year: 2019, Volume and Issue: 12(565)

Published: Jan. 22, 2019

Identifying the targets of “dark” kinases will provide new biological and disease insights.

Language: Английский

Citations

300

Protein palmitoylation and cancer DOI Open Access

Pin‐Joe Ko,

Scott J. Dixon

EMBO Reports, Journal Year: 2018, Volume and Issue: 19(10)

Published: Sept. 19, 2018

Language: Английский

Citations

298

Robust, reproducible and quantitative analysis of thousands of proteomes by micro-flow LC–MS/MS DOI Creative Commons
Yangyang Bian, Runsheng Zheng, Florian Bayer

et al.

Nature Communications, Journal Year: 2020, Volume and Issue: 11(1)

Published: Jan. 9, 2020

Abstract Nano-flow liquid chromatography tandem mass spectrometry (nano-flow LC–MS/MS) is the mainstay in proteome research because of its excellent sensitivity but often comes at expense robustness. Here we show that micro-flow LC–MS/MS using a 1 × 150 mm column shows reproducibility chromatographic retention time (<0.3% coefficient variation, CV) and protein quantification (<7.5% data from >2000 samples human cell lines, tissues body fluids. Deep analysis identifies >9000 proteins >120,000 peptides 16 h sample multiplexing tags increases throughput to 11 proteomes h. The system >30,000 phosphopeptides 12 protein-protein or protein-drug interaction experiments can be analyzed 20 min per sample. We same used analyze >7500 without apparent loss performance. This study demonstrates suitable for broad range proteomic applications.

Language: Английский

Citations

288

Mapping the Degradable Kinome Provides a Resource for Expedited Degrader Development DOI Creative Commons
Katherine A. Donovan, Fleur M. Ferguson, Jonathan W. Bushman

et al.

Cell, Journal Year: 2020, Volume and Issue: 183(6), P. 1714 - 1731.e10

Published: Dec. 1, 2020

Language: Английский

Citations

285

A Curated Resource for Phosphosite-specific Signature Analysis DOI Creative Commons
Karsten Krug, Philipp Mertins, Bin Zhang

et al.

Molecular & Cellular Proteomics, Journal Year: 2018, Volume and Issue: 18(3), P. 576 - 593

Published: Dec. 19, 2018

Signaling pathways are orchestrated by post-translational modifications (PTMs) such as phosphorylation. However, pathway analysis of PTM data sets generated mass spectrometry (MS)-based proteomics is typically performed at a gene-centric level because the lack appropriately curated signature databases and bioinformatic tools that leverage site-specific information. Here we present first version PTMsigDB, database modification signatures perturbations, kinase activities signaling from more than 2,500 publications. We adapted widely used single sample Gene Set Enrichment Analysis approach to utilize enabling

Language: Английский

Citations

265

Targeting FAK in anticancer combination therapies DOI
John C. Dawson, Alan Serrels, Dwayne G. Stupack

et al.

Nature reviews. Cancer, Journal Year: 2021, Volume and Issue: 21(5), P. 313 - 324

Published: March 17, 2021

Language: Английский

Citations

263

The emerging role of mass spectrometry-based proteomics in drug discovery DOI
Felix Meissner, Jennifer Geddes‐McAlister, Matthias Mann

et al.

Nature Reviews Drug Discovery, Journal Year: 2022, Volume and Issue: 21(9), P. 637 - 654

Published: March 29, 2022

Language: Английский

Citations

230

Multiomics Profiling Establishes the Polypharmacology of FDA-Approved CDK4/6 Inhibitors and the Potential for Differential Clinical Activity DOI Creative Commons
Marc Hafner, Caitlin E. Mills, Kartik Subramanian

et al.

Cell chemical biology, Journal Year: 2019, Volume and Issue: 26(8), P. 1067 - 1080.e8

Published: June 6, 2019

Language: Английский

Citations

215

Artificial intelligence in drug design DOI

Feisheng Zhong,

Jing Xing, Xutong Li

et al.

Science China Life Sciences, Journal Year: 2018, Volume and Issue: 61(10), P. 1191 - 1204

Published: July 18, 2018

Language: Английский

Citations

213

A Comprehensive Overview of Globally Approved JAK Inhibitors DOI Creative Commons
Ahmed M. Shawky, Faisal A. Almalki, Ashraf N. Abdalla

et al.

Pharmaceutics, Journal Year: 2022, Volume and Issue: 14(5), P. 1001 - 1001

Published: May 6, 2022

Janus kinase (JAK) is a family of cytoplasmic non-receptor tyrosine kinases that includes four members, namely JAK1, JAK2, JAK3, and TYK2. The JAKs transduce cytokine signaling through the JAK-STAT pathway, which regulates transcription several genes involved in inflammatory, immune, cancer conditions. Targeting JAK with small-molecule inhibitors has proved to be effective treatment different types diseases. In current review, eleven received approval for clinical use have been discussed. These drugs are abrocitinib, baricitinib, delgocitinib, fedratinib, filgotinib, oclacitinib, pacritinib, peficitinib, ruxolitinib, tofacitinib, upadacitinib. aim review was provide an integrated overview chemical pharmacological data globally approved inhibitors. synthetic routes were described. addition, their inhibitory activities against uses also explained. Moreover, crystal structures summarized, primary focus on binding modes interactions. proposed metabolic pathways metabolites these illustrated. To sum up, could help design new potential therapeutic benefits inflammatory autoimmune

Language: Английский

Citations

205