Neuron,
Journal Year:
2024,
Volume and Issue:
112(15), P. 2614 - 2630.e5
Published: June 5, 2024
Electric
fields
affect
the
activity
of
neurons
and
brain
circuits,
yet
how
this
happens
at
cellular
level
remains
enigmatic.
Lack
understanding
to
stimulate
promote
or
suppress
specific
significantly
limits
basic
research
clinical
applications.
Here,
we
study
electric
impact
subthreshold
spiking
properties
major
cortical
neuronal
classes.
We
find
that
in
rodent
human
cortex
exhibit
strong,
cell-class-dependent
entrainment
depends
on
stimulation
frequency.
Excitatory
pyramidal
neurons,
with
their
slower
spike
rate,
entrain
both
slow
fast
fields,
while
inhibitory
classes
like
Pvalb
Sst
(with
spiking)
predominantly
phase-lock
fields.
show
spike-field
is
result
two
effects:
non-specific
membrane
polarization
occurring
across
class-specific
excitability
properties.
Importantly,
these
are
present
areas
species.
These
findings
allow
for
design
selective
neuromodulation.
Nature Neuroscience,
Journal Year:
2024,
Volume and Issue:
unknown
Published: Oct. 14, 2024
Alzheimer's
disease
(AD)
is
the
leading
cause
of
dementia
in
older
adults.
Although
AD
progression
characterized
by
stereotyped
accumulation
proteinopathies,
affected
cellular
populations
remain
understudied.
Here
we
use
multiomics,
spatial
genomics
and
reference
atlases
from
BRAIN
Initiative
to
study
middle
temporal
gyrus
cell
types
84
donors
with
varying
pathologies.
This
cohort
includes
33
male
51
female
donors,
an
average
age
at
time
death
88
years.
We
used
quantitative
neuropathology
place
along
a
pseudoprogression
score.
Pseudoprogression
analysis
revealed
two
phases:
early
phase
slow
increase
pathology,
presence
inflammatory
microglia,
reactive
astrocytes,
loss
somatostatin
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Jan. 24, 2023
Mammalian
cortex
features
a
vast
diversity
of
neuronal
cell
types,
each
with
characteristic
anatomical,
molecular
and
functional
properties.
Synaptic
connectivity
powerfully
shapes
how
type
participates
in
the
cortical
circuit,
but
mapping
rules
at
resolution
distinct
types
remains
difficult.
Here,
we
used
millimeter-scale
volumetric
electron
microscopy
1
to
investigate
all
inhibitory
neurons
across
densely-segmented
population
1352
cells
spanning
layers
mouse
visual
cortex,
producing
wiring
diagram
connections
more
than
70,000
synapses.
Taking
data-driven
approach
inspired
by
classical
neuroanatomy,
classified
based
on
relative
targeting
dendritic
compartments
other
developed
novel
classification
excitatory
morphological
synaptic
input
The
between
revealed
class
disinhibitory
specialist
basket
cells,
addition
familiar
subclasses.
Analysis
onto
found
widespread
specificity,
many
interneurons
exhibiting
differential
certain
subpopulations
spatially
intermingled
potential
targets.
Inhibitory
was
organized
into
“motif
groups,”
diverse
sets
that
collectively
target
both
perisomatic
same
Collectively,
our
analysis
identified
new
organizing
principles
for
inhibition
will
serve
as
foundation
linking
modern
multimodal
atlases
diagram.
Cell,
Journal Year:
2023,
Volume and Issue:
186(24), P. 5411 - 5427.e23
Published: Nov. 1, 2023
Neurons
build
synaptic
contacts
using
different
protein
combinations
that
define
the
specificity,
function,
and
plasticity
potential
of
synapses;
however,
diversity
proteomes
remains
largely
unexplored.
We
prepared
synaptosomes
from
7
transgenic
mouse
lines
with
fluorescently
labeled
presynaptic
terminals.
Combining
microdissection
5
brain
regions
fluorescent-activated
synaptosome
sorting
(FASS),
we
isolated
analyzed
18
synapse
types.
discovered
∼1,800
unique
synapse-type-enriched
proteins
allocated
thousands
to
types
synapses
(https://syndive.org/).
identify
shared
modules
highlight
proteomic
hotspots
for
specialization.
reveal
common
features
striatal
dopaminergic
proteome
discover
signatures
relate
functional
properties
interneuron
classes.
This
study
provides
a
molecular
systems-biology
analysis
framework
integrate
information
subtypes
interest
cellular
or
circuit-level
experiments.
Nature Neuroscience,
Journal Year:
2024,
Volume and Issue:
27(3), P. 547 - 560
Published: Jan. 18, 2024
Abstract
The
mammalian
cerebral
cortex
is
anatomically
organized
into
a
six-layer
motif.
It
currently
unknown
whether
corresponding
laminar
motif
of
neuronal
activity
patterns
exists
across
the
cortex.
Here
we
report
such
in
power
local
field
potentials
(LFPs).
Using
probes,
recorded
LFPs
from
14
cortical
areas
hierarchy
five
macaque
monkeys.
locations
recordings
were
histologically
identified
by
electrolytic
lesions.
Across
all
areas,
found
ubiquitous
spectrolaminar
pattern
characterized
an
increasing
deep-to-superficial
layer
gradient
high-frequency
peaking
layers
2/3
and
superficial-to-deep
alpha-beta
5/6.
Laminar
additional
species
showed
that
highly
preserved
among
primates—macaque,
marmoset
human—but
more
dissimilar
mouse.
Our
results
suggest
existence
canonical
layer-based
frequency-based
mechanism
for
computation.
Nature Neuroscience,
Journal Year:
2024,
Volume and Issue:
27(1), P. 137 - 147
Published: Jan. 1, 2024
Abstract
Recurrent
cortical
activity
sculpts
visual
perception
by
refining,
amplifying
or
suppressing
input.
However,
the
rules
that
govern
influence
of
recurrent
remain
enigmatic.
We
used
ensemble-specific
two-photon
optogenetics
in
mouse
cortex
to
isolate
impact
from
external
found
spatial
arrangement
and
feature
preference
stimulated
ensemble
neighboring
neurons
jointly
determine
net
effect
activity.
Photoactivation
these
ensembles
drives
suppression
all
cells
beyond
30
µm
but
uniformly
activation
closer
similarly
tuned
cells.
In
nonsimilarly
cells,
compact,
cotuned
drive
suppression,
while
diffuse,
activation.
Computational
modeling
suggests
highly
local
excitatory
connectivity
selective
convergence
onto
inhibitory
explain
effects.
Our
findings
reveal
a
straightforward
logic
which
space
their
on
Nature,
Journal Year:
2024,
Volume and Issue:
unknown
Published: April 24, 2024
The
cerebral
cortex
is
composed
of
neuronal
types
with
diverse
gene
expression
that
are
organized
into
specialized
cortical
areas.
These
areas,
each
characteristic
cytoarchitecture1,2,
connectivity3,4
and
activity5,6,
wired
modular
networks3,4,7.
However,
it
remains
unclear
whether
these
spatial
organizations
reflected
in
transcriptomic
signatures
how
such
established
development.
Here
we
used
BARseq,
a
high-throughput
situ
sequencing
technique,
to
interrogate
the
104
cell-type
marker
genes
10.3
million
cells,
including
4,194,658
neurons
over
nine
mouse
forebrain
hemispheres,
at
cellular
resolution.
De
novo
clustering
single
revealed
consistent
previous
single-cell
RNA
studies8,9.
composition
highly
predictive
area
identity.
Moreover,
areas
similar
compositions
types,
which
defined
as
modules,
overlap
connected,
suggesting
same
organization
both
connectivity.
To
explore
profiles
depend
on
development,
assessed
distributions
after
neonatal
binocular
enucleation.
Notably,
enucleation
caused
shifting
compositional
visual
towards
neighbouring
within
module,
peripheral
inputs
sharpen
distinct
identities
modules.
Enabled
by
high
throughput,
low
cost
reproducibility
our
study
provides
proof
principle
for
use
large-scale
reveal
brain-wide
molecular
architecture
understand
its
Nature,
Journal Year:
2025,
Volume and Issue:
640(8058), P. 448 - 458
Published: April 9, 2025
Mammalian
cortex
features
a
vast
diversity
of
neuronal
cell
types,
each
with
characteristic
anatomical,
molecular
and
functional
properties1.
Synaptic
connectivity
shapes
how
type
participates
in
the
cortical
circuit,
but
mapping
rules
at
resolution
distinct
types
remains
difficult.
Here
we
used
millimetre-scale
volumetric
electron
microscopy2
to
investigate
all
inhibitory
neurons
across
densely
segmented
population
1,352
cells
spanning
layers
mouse
visual
cortex,
producing
wiring
diagram
inhibition
more
than
70,000
synapses.
Inspired
by
classical
neuroanatomy,
classified
based
on
targeting
dendritic
compartments
developed
an
excitatory
neuron
classification
reconstructions
whole-cell
maps
synaptic
input.
Single-cell
showed
class
disinhibitory
specialist
that
targets
basket
cells.
Analysis
onto
found
widespread
specificity,
many
interneurons
exhibiting
differential
spatially
intermingled
subpopulations.
Inhibitory
was
organized
into
'motif
groups',
diverse
sets
collectively
target
both
perisomatic
same
targets.
Collectively,
our
analysis
identified
new
organizing
principles
for
will
serve
as
foundation
linking
contemporary
multimodal
atlases
diagram.