Identification of Prognostic Genes Related to Cell Senescence and Lipid Metabolism in Glioblastoma Based on Transcriptome and Single-Cell RNA-Seq Data
Qiong Li,
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Hongde Liu
No information about this author
International Journal of Molecular Sciences,
Journal Year:
2025,
Volume and Issue:
26(5), P. 1875 - 1875
Published: Feb. 21, 2025
Glioblastoma
(GBM)
is
the
most
aggressive
primary
brain
cancer,
with
poor
prognosis
due
to
its
behavior
and
high
heterogeneity.
This
study
aimed
identify
cellular
senescence
(CS)
lipid
metabolism
(LM)-related
prognostic
genes
improve
GBM
treatment.
Transcriptome
scRNA-seq
data,
CS-associated
(CSAGs),
LM-related
(LMRGs)
were
acquired
from
public
databases.
Prognostic
identified
by
intersecting
CSAGs,
LMRGs,
differentially
expressed
(DEGs),
followed
WGCNA
univariate
Cox
regression.
A
risk
model
nomogram
constructed.
Analyses
covered
clinicopathological
features,
immune
microenvironment,
somatic
mutations,
drug
sensitivity.
data
key
cells
gene
expression.
SOCS1
PHB2
as
markers,
contributing
construction
of
a
robust
excellent
predictive
ability.
High-risk
group
(HRG)
patients
had
poorer
survival,
higher
stromal
scores,
distinct
mutation
profiles.
Drug
sensitivity
analysis
revealed
significant
differences
in
IC50
values.
In
microglia
differentiation,
showed
dynamic
expression
patterns.
These
findings
provide
new
strategies
for
Language: Английский
Radiation damage to a three-dimensional hydrogel model of the brain perivascular niche
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2025,
Volume and Issue:
unknown
Published: Feb. 26, 2025
Glioblastoma
(GBM)
is
a
highly
aggressive
and
recurrent
brain
cancer
characterized
by
diffuse
metastasis
at
the
tumor
margins.
Radiation
therapy
standard
component
of
current
treatment
offers
potential
for
improved
patient
outcomes.
While
radiation
targets
GBM
cells
in
margins,
it
may
also
significantly
damage
adjacent
non-cancerous
tissues,
leading
to
reduced
quality
life
potentially
creating
tumor-supportive
microenvironment.
The
perivascular
niche
(PVN)
margins
believed
play
significant
role
regulating
glioblastoma
stem
cell
subpopulation
as
well
serving
site
recurrence
migration.
Understanding
impact
on
PVN
can
better
inform
schemes
improve
our
understanding
recurrence,
but
difficult
vivo
.
Here
we
adapt
previously
developed
three-dimensional
hydrogel
model
investigate
dosage
delivery
rate
properties
vitro
Effects
vessel
architecture
be
measured
this
hydrogel-based
model,
suggesting
an
approach
that
provide
insight
into
effects
shorter
time
scale
relative
experiments.
plays
progression
target
therapy.
We
report
method
use
models
benchmark
This
provides
new
Language: Английский
Targeting the DNA damage response in cancer
Guffanti Federica,
No information about this author
Chiappa Michela,
No information about this author
Giovanna Damia
No information about this author
et al.
MedComm,
Journal Year:
2024,
Volume and Issue:
5(11)
Published: Oct. 31, 2024
DNA
damage
response
(DDR)
pathway
is
the
coordinated
cellular
network
dealing
with
identification,
signaling,
and
repair
of
damage.
It
tightly
regulates
cell
cycle
progression
promotes
to
minimize
daughter
cells.
Key
proteins
involved
in
DDR
are
frequently
mutated/inactivated
human
cancers
promote
genomic
instability,
a
recognized
hallmark
cancer.
Besides
being
an
intrinsic
property
tumors,
also
represents
unique
therapeutic
opportunity.
Indeed,
inhibition
expected
delay
repair,
causing
persistent
unrepaired
breaks,
interfere
progression,
sensitize
cancer
cells
several
DNA-damaging
agents,
such
as
radiotherapy
chemotherapy.
In
addition,
defects
have
been
shown
render
these
more
dependent
on
remaining
pathways,
which
could
be
targeted
very
specifically
(synthetic
lethal
approach).
Research
over
past
two
decades
has
led
synthesis
testing
hundreds
small
inhibitors
against
key
proteins,
some
antitumor
activity
cancers.
parallel,
search
for
synthetic
lethality
interaction
broadening
use
inhibitors.
this
review,
we
discuss
state-of-art
ataxia-telangiectasia
mutated,
ataxia-telangiectasia-and-Rad3-related
protein,
checkpoint
kinase
1,
Wee1
Polθ
inhibitors,
highlighting
results
obtained
ongoing
clinical
trials
both
monotherapy
combination
chemotherapy
radiotherapy.
Language: Английский
Progress of ATM inhibitors: opportunities and challenges
Shan Du,
No information about this author
Qi Liang,
No information about this author
Jianyou Shi
No information about this author
et al.
European Journal of Medicinal Chemistry,
Journal Year:
2024,
Volume and Issue:
277, P. 116781 - 116781
Published: Aug. 15, 2024
Language: Английский
Inhibition of H3K27M-enhanced ATM signaling increases radiation efficacy in diffuse midline glioma
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Nov. 3, 2024
ABSTRACT
H3K27-altered
diffuse
midline
glioma
(DMG)
is
an
aggressive
and
treatment-resistant
form
of
pediatric
high-grade
(pHGG).
The
disease
defined
by
point
mutations
in
histone
H3
that
convert
lysine
27
to
methionine
(termed
H3K27M),
resulting
genome-wide
epigenetic
changes
drive
tumorigenesis.
While
radiation
therapy
the
standard
care,
subsequent
recurrence,
often
within
high
dose
field,
universal.
We
found
apical
DNA
damage
response
(DDR)
kinase
Ataxia
Telangiectasia-Mutated
(ATM)
was
uniquely
upregulated
H3K27M-expressing
patient
tumor
samples
compared
pHGG
expressing
only
wild-type
H3.
Using
a
panel
H3K27
isogenic
DMG
cell
lines,
we
further
H3K27M
associated
with
reduced
H3K27me
3
ATM
promoter,
increased
mRNA
levels,
elevated
DDR
signaling,
even
absence
exogenous
damage.
Consistent
these
results,
AZD1390,
clinical-grade,
CNS-penetrant
inhibitor,
sensitized
neurospheres
long-term
effects
on
survival,
part
due
attenuated
repair
radiation-induced
Finally,
AZD1390
orthotopic
mutant
tumors
radiotherapy
significantly
extended
median
survival
relative
vehicle,
or
alone
(50
days
vs
31,
36
39
days,
respectively)
minimal
adverse
effects.
Taken
together,
data
provide
direct
mechanistic
link
between
mutation
expression
support
clinical
investigation
H3K27M-altered
DMG.
Language: Английский
Current trends and future perspectives in hadron therapy: radiobiology
Health and Technology,
Journal Year:
2024,
Volume and Issue:
14(5), P. 867 - 872
Published: July 15, 2024
Abstract
Purpose
The
purpose
of
this
article
was
to
highlight
current
and
future
trends
in
radiobiology
an
effort
move
hadron
therapy
forward
through
the
application
new
knowledge
DNA
damage
subsequent
response
heavy
ion
radiotherapy,
immune
oncology
interconnection
between.
Methods
subject
matter
begins
with
a
description
role
radiation
eliciting
either
immunogenic
or
tolerogenic
exposure.
fragmented
is
described,
followed
by
definitive
that
repair,
not,
complex
after
exposure
plays
survival
irradiated
cells.
Results
process
which
ionizing
elicits
rather
than
becoming
clearer.
timing
fractionated
radiotherapy
when
combined
checkpoint
inhibitor
not
clear
may
be
tumor
site
specific.
Furthermore,
whether
more
effective
at
generating
durable
unknown.
Conclusions
Cytosolic
significant
innate
likelihood
would
generate
because
it
less
likely
repaired,
become
cytosolic
DNA,
activate
response.
Lastly,
repair
pathway
choice
appears
credible
bio-indicator
for
selection
as
well
identify
druggable
targets
enhance
therapy.
Language: Английский
ATM Kinase Small Molecule Inhibitors Prevent Radiation-Induced Apoptosis of Mouse Neurons In Vivo
Yüksel Aydar,
No information about this author
Sanara S. Rambukkanage,
No information about this author
Lauryn Brown
No information about this author
et al.
Kinases and Phosphatases,
Journal Year:
2024,
Volume and Issue:
2(3), P. 268 - 278
Published: Sept. 18, 2024
ATM
kinase
is
becoming
an
important
therapeutic
target
for
tumor
radiosensitization.
Radiation
known
to
cause
neuro-inflammation
and
neurodegeneration;
however,
the
effects
of
small
molecule
inhibitors
(ATMi’s)
radiation
on
normal
tissue,
including
healthy
brain,
are
largely
unexplored.
Therefore,
we
examined
mouse
CNS
after
ATMi
radiosensitization
with
a
focus
fate
neurons.
We
used
several
approaches
assess
DNA
damage
response
(DDR)
apoptosis
neurons
using
immunostaining.
In
vivo,
significant
decrease
in
viable
increase
degenerating
was
observed
mice
treated
alone.
On
other
hand,
alone
had
little
no
effect
neuron
viability
did
not
induce
apoptosis.
Importantly,
ATMi’s
further
toxicity.
fact,
multiplex
immunostaining
showed
that
clinical
candidate
(AZD1390)
protected
from
by
90%
at
4
h
radiation.
speculate
lack
toxicity
due
ATM–p53
that,
if
blocked
transiently
ATMi,
protective.
Altogether,
line
previous
work
knockout
mice,
provide
evidence
inhibition
molecules
does
add
neuronal
toxicity,
might,
protect
them
radiation-induced
least
short
term.
Language: Английский
New insight into targeting the DNA damage response in the treatment of glioblastoma
Chinese Journal of Natural Medicines,
Journal Year:
2024,
Volume and Issue:
22(10), P. 869 - 886
Published: Oct. 1, 2024
Language: Английский
Glioblastoma Drives Protease-Independent Extracellular Matrix Invasion of Microglia
Published: Nov. 11, 2024
Glioblastoma
(GBM)
is
the
most
common
and
lethal
form
of
primary
brain
cancer.
Microglia
infiltration
into
tumor
microenvironment
associated
with
immunosuppression
poor
prognosis.
Improved
physicochemical
understanding
microglia
activation
invasion
may
provide
novel
GBM
therapeutic
strategies
essential
for
improving
long-term
treatment
efficacy.
Here,
we
combine
microfluidic
systems
3-D
collagen
hydrogels
to
systematically
investigate
activation,
invasion,
contractility
cytokine
secretion
in
response
GBM-microglia
crosstalk.
inflammatory
biomolecules
significantly
promote
3D
microglia.
Interestingly,
not
affected
by
inhibitors
MMP
activity
or
cellular
glycolysis.
In
contrast,
ROCK-pathway
inhibition
impedes
invasion.
Infrared
microscopy
analyses
show
that
co-culture
does
alter
lipid
content.
Further,
conditioned
media
resulted
increased
hydrogel
contraction,
suggesting
importance
physically
remodel
local
extracellular
matrix
(ECM).
We
also
identify
a
panel
soluble
proteins
contribute
chemotaxis,
such
as
TIMP-1
CXCL12.
Taken
together,
this
study
suggests
presence
cells
can
enhance
via
contractility,
independent
Language: Английский