Journal of Bacteriology,
Journal Year:
2024,
Volume and Issue:
206(7)
Published: June 10, 2024
The
Candidate
Phyla
Radiation
(CPR)
represents
an
extensive
bacterial
clade
comprising
primarily
uncultured
lineages
and
is
distinguished
from
other
bacteria
by
a
significant
prevalence
of
insertion
sequences
(ISs)
within
their
rRNA
genes.
However,
our
understanding
the
taxonomic
distribution
characteristics
these
ISs
remains
limited.
In
this
study,
we
used
comprehensive
approach
to
systematically
determine
nature
in
CPR
bacteria.
analysis
hundreds
gene
across
65
phyla
revealed
that
are
present
48%
16S
genes
82%
23S
genes,
indicating
broad
clade,
with
exceptions
Applied and Environmental Microbiology,
Journal Year:
2025,
Volume and Issue:
unknown
Published: April 17, 2025
ABSTRACT
To
combat
the
increasing
levels
of
carbon
dioxide
(CO
2
)
released
from
combustion
fossil
fuels,
microalgae
have
emerged
as
a
promising
strategy
for
biological
capture,
utilization,
and
storage.
This
study
used
marine
microalgal
strain,
Nannochloropsis
oceanica
IMET1,
which
thrives
in
high
CO
concentrations.
A
high-pH,
high-alkalinity
culture
was
designed
capture
through
algal
biomass
production
well
permanent
sequestration
calcium
carbonate
(CaCO
3
precipitation.
accomplished
by
timed
pH
elevation
addition
sodium
bicarbonate
to
cultures
N.
grown
at
lab
scale
(1
L)
pilot
(500
with
10%
5%
,
respectively.
Our
data
showed
that
0.02
M
NaHCO
promoted
growth
sparging
ambient
air
after
12
days
raised
created
favorable
CaCO
formation
conditions.
At
1
L
scale,
we
reached
1.52
g
−1
an
extra
9.3%
captured
form
precipitates.
500
60%
(Day
40)
maximum
rate
63.2
m
−2
day
35).
Bacterial
communities
associated
were
dominated
two
novel
Patescibacteria.
Functional
analysis
revealed
genes
several
plant
growth-promotion
traits
(PGPTs)
enriched
within
this
group.
The
microalgal-bacterial
coculture
system
offers
advantages
enhanced
mitigation
simultaneous
precipitation
recalcitrant
long-term
IMPORTANCE
Capturing
fuel
is
utmost
importance
impacts
climate
change
continue
worsen.
Microalgae
can
remove
their
natural
photosynthetic
pathways
are
additionally
able
convert
into
stable,
).
We
demonstrate
microalgae-based
systems
be
greatly
improved
alkalinity
providing
optimal
conditions
results
microalga,
strain
show
(pilot)
scale.
optimized
provides
approach
mechanisms:
(i)
organic
(ii)
inorganic
stored
permanently
3.
mBio,
Journal Year:
2025,
Volume and Issue:
unknown
Published: April 29, 2025
ABSTRACT
Recent
genomic
surveys
have
uncovered
candidate
phyla
radiation
(CPR)
bacteria
and
DPANN
archaea
as
major
microbial
dark
matter
lineages
in
various
anoxic
habitats.
Despite
their
extraordinary
diversity,
the
biogeographic
patterns
ecological
implications
of
these
ultra-small
putatively
symbiotic
microorganisms
remained
elusive.
Here,
we
performed
metagenomic
sequencing
on
90
geochemically
diverse
acid
mine
drainage
sediments
sampled
across
southeast
China
recovered
282
CPR
189
nonredundant
metagenome-assembled
genomes,
which
collectively
account
for
up
to
28.6%
31.2%
indigenous
prokaryotic
communities,
respectively.
We
found
that,
remarkably,
geographic
distance
represents
primary
factor
driving
large-scale
distribution
both
organisms,
followed
by
pH
Fe.
Although
groups
might
be
capable
iron
reduction
through
a
flavin-based
extracellular
electron
transfer
mechanism,
significant
differences
are
metabolic
capabilities
(with
complex
carbon
degradation
chitin
being
more
prevalent
whereas
fermentation
acetate
production
enriched
DPANN),
indicating
potential
niche
differentiation.
Predicted
hosts
mainly
Acidobacteriota
,
Bacteroidota
Proteobacteria
Thermoplasmatota
DPANN,
extensive,
unbalanced
exchanges
between
symbionts
putative
displayed.
Together,
our
results
provide
initial
insights
into
interplays
two
physicochemical
environments
host
populations
at
large
scale.
IMPORTANCE
Candidate
constitute
fraction
Earth’s
diversity.
ubiquity
abundance,
especially
habitats,
know
little
about
community
drivers
ultra-small,
episymbiotic
ranges.
This
study
is
facilitated
collection
genomes
from
metagenomes
(AMD)
China.
Our
comprehensive
analyses
allowed
first
functional
differentiation
enigmatic
AMD
model
system.
Microorganisms,
Journal Year:
2022,
Volume and Issue:
10(11), P. 2232 - 2232
Published: Nov. 11, 2022
Candidate
Phyla
Radiation
(CPR)
bacteria
is
a
bacterial
division
composed
mainly
of
candidate
phyla
with
ultra-small
cell
sizes,
streamlined
genomes,
and
limited
metabolic
capacity,
which
are
generally
considered
to
survive
in
parasitic
or
symbiotic
manner.
Despite
their
wide
distribution
rich
diversity,
CPR
have
received
little
attention
until
recent
years,
therefore
poorly
understood.
This
review
systematically
summarizes
the
history
research,
parasitic/symbiotic
lifestyle,
ecological
unique
features
bacteria,
hoping
provide
guidance
for
future
physiological
research
on
bacteria.
Journal of Bacteriology,
Journal Year:
2024,
Volume and Issue:
206(7)
Published: June 10, 2024
The
Candidate
Phyla
Radiation
(CPR)
represents
an
extensive
bacterial
clade
comprising
primarily
uncultured
lineages
and
is
distinguished
from
other
bacteria
by
a
significant
prevalence
of
insertion
sequences
(ISs)
within
their
rRNA
genes.
However,
our
understanding
the
taxonomic
distribution
characteristics
these
ISs
remains
limited.
In
this
study,
we
used
comprehensive
approach
to
systematically
determine
nature
in
CPR
bacteria.
analysis
hundreds
gene
across
65
phyla
revealed
that
are
present
48%
16S
genes
82%
23S
genes,
indicating
broad
clade,
with
exceptions