Severe
acute
respiratory
syndrome
coronavirus
2
(SARS-CoV-2),
the
virus
responsible
for
disease
2019
(COVID-19),
remains
a
global
public
health
threat
with
major
economic
implications.
The
non-structural
protein
16
(nsp16)
of
SARS-CoV-2,
in
complex
nsp10,
catalyses
final
step
viral
mRNA
capping
via
its
2’-O-methylase
activity,
enabling
to
evade
host
immunity
and
protect
from
degradation.
However,
factors
regulating
nsp16
have
not
been
thoroughly
explored.
Although
various
E3
ubiquitin
ligases
are
known
interact
SARS-CoV-2
proteins,
their
specific
roles
targeting
degradation
remain
unclear.
In
this
study,
we
demonstrate
that
is
ubiquitinated
degraded
by
UBR5
MARCHF7,
acting
through
ubiquitin-proteasome
system
(UPS).
MARCHF7
induce
K48-
K27-linked
ubiquitination,
respectively,
independent
processes
inhibit
replication
both
vitro
vivo.
Furthermore,
exhibited
broad-spectrum
antiviral
activity
degrading
variants
different
strains.
Our
findings
uncover
novel
mechanisms
which
UPS
antagonises
provide
promising
targets
therapeutic
intervention
against
COVID-19.
Signal Transduction and Targeted Therapy,
Journal Year:
2024,
Volume and Issue:
9(1)
Published: April 4, 2024
Abstract
NEDD8
(Neural
precursor
cell
expressed
developmentally
downregulated
protein
8)
is
an
ubiquitin-like
that
covalently
attached
to
a
lysine
residue
of
substrate
through
process
known
as
neddylation,
catalyzed
by
the
enzyme
cascade,
namely
activating
(E1),
conjugating
(E2),
and
ligase
(E3).
The
substrates
neddylation
are
categorized
into
cullins
non-cullin
proteins.
Neddylation
activates
CRLs
(cullin
RING
ligases),
largest
family
E3
ligases,
whereas
alters
their
stability
activity,
well
subcellular
localization.
Significantly,
pathway
and/or
many
abnormally
activated
or
over-expressed
in
various
human
diseases,
such
metabolic
disorders,
liver
dysfunction,
neurodegenerative
cancers,
among
others.
Thus,
targeting
becomes
attractive
strategy
for
treatment
these
diseases.
In
this
review,
we
first
provide
general
introduction
on
its
biochemical
regulation,
crystal
structures
enzymes
complex
with
cullin
substrates;
then
discuss
how
governs
key
biological
processes
via
modification
substrates.
We
further
review
literature
data
dysregulated
several
particularly
cancer,
followed
outline
current
efforts
discovery
small
molecule
inhibitors
promising
therapeutic
approach.
Finally,
few
perspectives
were
proposed
extensive
future
investigations.
Severe
acute
respiratory
syndrome
coronavirus
2
(SARS-CoV-2),
the
virus
responsible
for
disease
2019
(COVID-19),
remains
a
global
public
health
threat
with
major
economic
implications.
The
non-structural
protein
16
(nsp16)
of
SARS-CoV-2,
in
complex
nsp10,
catalyses
final
step
viral
mRNA
capping
via
its
2’-O-methylase
activity,
enabling
to
evade
host
immunity
and
protect
from
degradation.
However,
factors
regulating
nsp16
have
not
been
thoroughly
explored.
Although
various
E3
ubiquitin
ligases
are
known
interact
SARS-CoV-2
proteins,
their
specific
roles
targeting
degradation
remain
unclear.
In
this
study,
we
demonstrate
that
is
ubiquitinated
degraded
by
UBR5
MARCHF7,
acting
through
ubiquitin-proteasome
system
(UPS).
MARCHF7
induce
K48-
K27-linked
ubiquitination,
respectively,
independent
processes
inhibit
replication
both
vitro
vivo.
Furthermore,
exhibited
broad-spectrum
antiviral
activity
degrading
variants
different
strains.
Our
findings
uncover
novel
mechanisms
which
UPS
antagonises
provide
promising
targets
therapeutic
intervention
against
COVID-19.
Journal of Virology,
Journal Year:
2025,
Volume and Issue:
unknown
Published: March 26, 2025
Enterovirus
71
(EV71)
is
a
major
cause
of
hand,
foot,
and
mouth
disease,
particularly
affecting
pediatric
populations
worldwide.
The
role
ZYG11B,
CUL2-complex-associated
E3
ubiquitin
ligase
from
the
Zyg-11
family,
in
antiviral
defense
against
EV71
remains
unclear.
To
our
knowledge,
this
study
first
to
reveal
that
ZYG11B
targets
VP1
for
proteasomal
degradation
via
ubiquitin-proteasome
pathway,
with
CRL2ZYG11B
complex
activity
specifically
driving
K33-linked
ubiquitination.
Mass
spectrometry
immunoprecipitation
analyses
confirmed
interaction
between
identified
key
domains
required
binding
both
CUL2.
Comparative
showed
ubiquitination
sites
are
highly
conserved
across
related
enteroviruses,
including
CA6,
CA16,
EVD68.
Functional
assays
further
demonstrated
restricts
these
viruses,
highlighting
its
potential
as
broad-spectrum
target.
These
findings
establish
critical
effector
host
responses
support
therapeutic
managing
enterovirus
infections.
ligases
deubiquitinases
have
become
important
topics
competition
viruses
hosts.
Here,
we
an
capable
degrading
structural
protein
making
factor.
We
proposed
inhibitory
effect
on
connecting
substrates
CUL2,
providing
new
design
drugs.
Severe
acute
respiratory
syndrome
coronavirus
2
(SARS-CoV-2),
the
causative
agent
of
disease
2019
(COVID-19),
remains
a
global
public
health
threat
with
considerable
economic
consequences.
The
non-structural
protein
16
(nsp16),
in
complex
nsp10,
facilitates
final
viral
mRNA
capping
step
through
its
2′-O-methylase
activity,
helping
virus
to
evade
host
immunity
and
prevent
degradation.
However,
nsp16
regulation
by
factors
poorly
understood.
While
various
E3
ubiquitin
ligases
interact
SARS-CoV-2
proteins,
their
roles
targeting
for
degradation
are
unclear.
In
this
study,
we
demonstrate
that
undergoes
ubiquitination
proteasomal
mediated
UBR5
MARCHF7.
induces
K48-linked
ubiquitination,
whereas
MARCHF7
promotes
K27-linked
independently
suppressing
replication
vitro
vivo.
Notably,
also
degrade
variants
from
different
strains,
exhibiting
broad-spectrum
antiviral
activity.
Our
findings
reveal
novel
mechanisms
ubiquitin-proteasome
system
(UPS)
highlight
potential
therapeutic
targets
against
COVID-19.
Severe
acute
respiratory
syndrome
coronavirus
2
(SARS-CoV-2),
the
causative
agent
of
disease
2019
(COVID-19),
remains
a
global
public
health
threat
with
considerable
economic
consequences.
The
nonstructural
protein
16
(nsp16),
in
complex
nsp10,
facilitates
final
viral
mRNA
capping
step
through
its
2′-
O
-methylase
activity,
helping
virus
to
evade
host
immunity
and
prevent
degradation.
However,
nsp16
regulation
by
factors
poorly
understood.
While
various
E3
ubiquitin
ligases
interact
SARS-CoV-2
proteins,
their
roles
targeting
for
degradation
remain
unclear.
In
this
study,
we
demonstrate
that
undergoes
ubiquitination
proteasomal
mediated
UBR5
MARCHF7.
induces
K48-linked
ubiquitination,
whereas
MARCHF7
promotes
K27-linked
independently
suppressing
replication
cell
cultures
mice.
Notably,
also
degrade
variants
from
different
strains,
exhibiting
broad-spectrum
antiviral
activity.
Our
findings
reveal
novel
mechanisms
ubiquitin-proteasome
system
(UPS)
highlight
potential
therapeutic
targets
against
COVID-19.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Aug. 30, 2024
Abstract
Severe
acute
respiratory
syndrome
coronavirus
2
(SARS-CoV-2),
the
virus
responsible
for
disease
2019
(COVID-19),
remains
a
global
public
health
threat
with
major
economic
implications.
The
non-structural
protein
16
(nsp16)
of
SARS-CoV-2,
in
complex
nsp10,
catalyses
final
step
viral
mRNA
capping
via
its
2’-O-methylase
activity,
enabling
to
evade
host
immunity
and
protect
from
degradation.
However,
factors
regulating
nsp16
have
not
been
thoroughly
explored.
Although
various
E3
ubiquitin
ligases
are
known
interact
SARS-CoV-2
proteins,
their
specific
roles
targeting
degradation
remain
unclear.
In
this
study,
we
demonstrate
that
is
ubiquitinated
degraded
by
UBR5
MARCHF7,
acting
through
ubiquitin-proteasome
system
(UPS).
MARCHF7
induce
K48-
K27-linked
ubiquitination,
respectively,
independent
processes
inhibit
replication
both
vitro
vivo.
Furthermore,
exhibited
broad-spectrum
antiviral
activity
degrading
variants
different
strains.
Our
findings
uncover
novel
mechanisms
which
UPS
antagonises
provide
promising
targets
therapeutic
intervention
against
COVID-19.
Biochemical Society Transactions,
Journal Year:
2024,
Volume and Issue:
unknown
Published: Sept. 2, 2024
E3
ubiquitin
ligases
regulate
the
composition
of
proteome.
These
enzymes
mono-
or
poly-ubiquitinate
their
substrates,
directly
altering
protein
function
targeting
proteins
for
degradation
by
proteasome.
In
this
review,
we
discuss
opposing
roles
human
as
effectors
and
targets
in
evolutionary
battle
between
host
pathogen,
specifically
context
SARS-CoV-2
infection.
Through
complex
effects
on
transcription,
translation,
trafficking,
can
either
attenuate
infection
become
vulnerabilities
that
are
exploited
virus
to
suppress
host's
antiviral
defenses.
For
example,
ligase
RNF185
regulates
stability
envelope
through
ubiquitin-proteasome
pathway,
depletion
significantly
increases
viral
titer
(iScience
(2023)
26,
106601).
We
highlight
recent
advances
identify
functions
numerous
life
cycle
assess
potential
novel
agents.
Journal of Medical Virology,
Journal Year:
2024,
Volume and Issue:
96(9)
Published: Sept. 1, 2024
The
ubiquitin-proteasome
system
is
frequently
employed
to
degrade
viral
proteins,
thereby
inhibiting
replication
and
pathogenicity.
Through
an
analysis
of
the
degradation
kinetics
all
SARS-CoV-2
our
study
revealed
rapid
several
particularly
NSP5.
Additionally,
we
identified
FBXO22,
E3
ubiquitin
ligase,
as
primary
regulator
NSP5
ubiquitination.
Moreover,
validated
interaction
between
FBXO22
NSP5,
demonstrating
that
FBXO22-mediated
ubiquitination
facilitated
its
recognition
by
proteasome,
leading
subsequent
degradation.
Specifically,
catalyzed
formation
K48-linked
polyubiquitin
chains
on
at
lysine
residues
5
90.
Knockdown
resulted
in
decreased
levels,
increased
stability,
enhanced
ability
evade
host
innate
immune
response.
Notably,
protein
level
were
negatively
correlated
with
load,
highlighting
importance
replication.
This
elucidates
molecular
mechanism
which
mediates
underscores
critical
role
limiting
identification
a
stability
provides
new
insights
potential
avenues
for
targeting
antiviral
strategies.