Metagenome of the kombucha microbiome DOI
Paulo Sérgio Pedroso Costa Júnior, André Ricardo Ferreira da Silva Rocha,

Bárbara Côgo Venturim

et al.

Elsevier eBooks, Journal Year: 2025, Volume and Issue: unknown, P. 129 - 145

Published: Jan. 1, 2025

Language: Английский

Exopolysaccharides Producing Bacteria: A Review DOI Creative Commons
А. И. Нетрусов, Elena V. Liyaskina,

Irina V. Kurgaeva

et al.

Microorganisms, Journal Year: 2023, Volume and Issue: 11(6), P. 1541 - 1541

Published: June 9, 2023

Bacterial exopolysaccharides (EPS) are essential natural biopolymers used in different areas including biomedicine, food, cosmetic, petroleum, and pharmaceuticals also environmental remediation. The interest them is primarily due to their unique structure properties such as biocompatibility, biodegradability, higher purity, hydrophilic nature, anti-inflammatory, antioxidant, anti-cancer, antibacterial, immune-modulating prebiotic activities. present review summarizes the current research progress on bacterial EPSs properties, biological functions, promising applications various fields of science, industry, medicine, technology, well characteristics isolation sources EPSs-producing strains. This provides an overview latest advances study important industrial xanthan, cellulose, levan. Finally, limitations future directions discussed.

Language: Английский

Citations

61

Investigating Biofilms: Advanced Methods for Comprehending Microbial Behavior and Antibiotic Resistance DOI Creative Commons
Ahmad Almatroudi

Frontiers in Bioscience-Landmark, Journal Year: 2024, Volume and Issue: 29(4), P. 133 - 133

Published: March 29, 2024

Biofilms, which consist of microorganisms enclosed in an extracellular polymeric material (EPS), hold immense importance the fields environmental research, industry, and medicine. They play a significant role ecosystem dynamics stability, but they also pose issues such as biofouling, corrosion, pollution. Biofilms medical environments are linked to persistent infections elevated healthcare expenses. The EPS matrix plays crucial maintaining structural integrity antibiotic resistance these structures. research primarily investigates facilitating horizontal gene transfer among biofilm communities, with particular emphasis on its impact this process. process is recognized pivotal mechanism emergence resistance, underscoring function biofilms. analysis highlights financial constraints caused by biofilms several industries. Biofilm-associated sector result escalated treatment expenses extended hospitalization periods. In industrial context, have increasing maintenance product contamination, emphasizing need for efficient management solutions. This review presents most recent progress utilization sophisticated imaging tools molecular methodologies. addition conventional techniques, explores tools, DNA RNA sequencing, conjunction proteomics. These approaches essential assessing genetic metabolic mechanisms that regulate development resistance. underscores significance employing interdisciplinary methodology study By incorporating range approaches, analysis, comprehensive understanding may be achieved. approach opens up possibilities developing novel solutions address negative impacts health, environment.

Language: Английский

Citations

16

Microbiome Assembly in Fermented Foods DOI Creative Commons
Nicolas L. Louw,

K.M. Lele,

Ruby Ye

et al.

Annual Review of Microbiology, Journal Year: 2023, Volume and Issue: 77(1), P. 381 - 402

Published: Sept. 15, 2023

For thousands of years, humans have enjoyed the novel flavors, increased shelf-life, and nutritional benefits that microbes provide in fermented foods beverages. Recent sequencing surveys ferments mapped patterns microbial diversity across space, time, production practices. But a mechanistic understanding how food microbiomes assemble has only recently begun to emerge. Using three as case studies (surface-ripened cheese, sourdough starters, vegetables), we use an ecological evolutionary framework identify communities ferments. By combining situ with vitro models, are beginning understand dispersal, selection, diversification, drift generate communities. Most producers unaware processes occurring their environments, but theory models ecology evolution can new approaches for managing microbiomes, from farm ferment.

Language: Английский

Citations

41

Non‐gene‐editing microbiome engineering of spontaneous food fermentation microbiota—Limitation control, design control, and integration DOI

Liangqiang Chen,

Guozheng Wang,

Mengjing Teng

et al.

Comprehensive Reviews in Food Science and Food Safety, Journal Year: 2023, Volume and Issue: 22(3), P. 1902 - 1932

Published: March 7, 2023

Non-gene-editing microbiome engineering (NgeME) is the rational design and control of natural microbial consortia to perform desired functions. Traditional NgeME approaches use selected environmental variables force Spontaneous food fermentation, oldest kind traditional NgeME, transforms foods into various fermented products using networks. In spontaneous fermentation microbiotas (SFFMs) are typically formed controlled manually by establishment limiting factors in small batches with little mechanization. However, limitation generally leads trade-offs between efficiency quality fermentation. Modern based on synthetic ecology have been developed designed communities explore assembly mechanisms target functional enhancement SFFMs. This has greatly improved our understanding microbiota control, but such still shortcomings compared NgeME. Here, we comprehensively describe research strategies for SFFMs modern We discuss ecological principles two enhance how best SFFM. also review recent applied theoretical propose an integrated vitro model bridge gaps

Language: Английский

Citations

24

Kombucha tea as an anti-hyperglycemic agent in humans with diabetes – a randomized controlled pilot investigation DOI Creative Commons

Chagai Mendelson,

Sabrina Sparkes,

Daniel Merenstein

et al.

Frontiers in Nutrition, Journal Year: 2023, Volume and Issue: 10

Published: Aug. 1, 2023

Kombucha is a popular fermented tea that has attracted considerable attention due, in part, to its suggested health benefits. Previous results from animal models led us hypothesize kombucha may reduce blood sugar levels humans with diabetes. The objective of this pilot clinical study was evaluate for anti-hyperglycemic activities adults diabetes mellitus type II.The organized as prospective randomized double-blinded crossover at single-center urban hospital system. Participants (n = 12) were instructed consume either product or placebo control (each 240 mL) 4 weeks. After an 8-week washout period, participants consumed the alternate product. Fasting glucose self-determined baseline and 1 weeks during each treatment period. Secondary outcomes, including overall health, insulin requirement, gut skin mental vulvovaginal measured by questionnaire same time points. microbiota assessed selective culturing 16S rRNA gene (bacteria) ITS (fungi) sequencing. Fermentation end products HPLC. Statistical significance changes fasting determined using paired, two-tailed student's t-tests.Kombucha lowered average compared (164 vs. 116 mg/dL, p 0.035), whereas did not (162 141 0.078). microbiota, cultural enumeration, mainly comprised lactic acid bacteria, acetic yeast, group present about 106 colony forming units (CFU)/mL. Likewise, sequencing confirmed bacteria most abundant showed Dekkera yeast. primary fermentation acids, both less than 1%. Ethanol 1.5%.Although limited small sample size, associated reduced Larger follow-up studies are warranted.ClinicalTrials.gov, identifier NCT04107207.

Language: Английский

Citations

23

Neurospora intermedia from a traditional fermented food enables waste-to-food conversion DOI Creative Commons
Vayu Maini Rekdal, José Manuel Villalobos‐Escobedo,

Nabila Rodriguez-Valeron

et al.

Nature Microbiology, Journal Year: 2024, Volume and Issue: 9(10), P. 2666 - 2683

Published: Aug. 29, 2024

Abstract Fungal fermentation of food and agricultural by-products holds promise for improving sustainability security. However, the molecular basis fungal waste-to-food upcycling remains poorly understood. Here we use a multi-omics approach to characterize oncom, fermented traditionally produced from soymilk in Java, Indonesia. Metagenomic sequencing samples small-scale producers Western Java indicated that fungus Neurospora intermedia dominates oncom. Further transcriptomic, metabolomic phylogenomic analysis revealed oncom-derived N. utilizes pectin cellulose degradation during belongs genetically distinct subpopulation associated with human-generated by-products. Finally, found grew on diverse such as fruit vegetable pomace plant-based milk waste, did not encode mycotoxins, could create foods were positively perceived by consumers outside These results showcase traditional significance future potential creating delicious nutritious readily available

Language: Английский

Citations

11

A comprehensive review on kombucha biofilms: A promising candidate for sustainable food product development DOI
Thinzar Aung, Mi Jeong Kim

Trends in Food Science & Technology, Journal Year: 2024, Volume and Issue: 144, P. 104325 - 104325

Published: Jan. 3, 2024

Language: Английский

Citations

8

Starting with screening strains to construct synthetic microbial communities (SynComs) for traditional food fermentation DOI
Xinyi Jiang, Zheng Peng, Juan Zhang

et al.

Food Research International, Journal Year: 2024, Volume and Issue: 190, P. 114557 - 114557

Published: May 27, 2024

Language: Английский

Citations

8

Fermentation of native Brazilian fruits with kombucha: a novel opportunity for producing low-alcohol beverages DOI Creative Commons
Taís Suhre, Mariana Fensterseifer Fabricio, Bruna Tischer

et al.

Food Bioscience, Journal Year: 2025, Volume and Issue: unknown, P. 106122 - 106122

Published: Feb. 1, 2025

Language: Английский

Citations

1

Reconstruction of Simplified Microbial Consortia to Modulate Sensory Quality of Kombucha Tea DOI Creative Commons
Nicola Ferremi Leali, Renato L. Binati, Francesco Martelli

et al.

Foods, Journal Year: 2022, Volume and Issue: 11(19), P. 3045 - 3045

Published: Sept. 30, 2022

Kombucha is a fermented tea with long history of production and consumption. It has been gaining popularity thanks to its refreshing taste assumed beneficial properties. The microbial community responsible for fermentation-acetic acid bacteria (AAB), yeasts, lactic (LAB)-is mainly found embedded in an extracellular cellulosic matrix located at the liquid-air interphase. To optimize process investigate contribution individual strains, collection 26 unique strains was established from artisanal-scale kombucha production; it included 13 AAB, 12 one LAB. Among these, distinctive namely Novacetimonas hansenii T7SS-4G1, Brettanomyces bruxellensis T7SB-5W6, Zygosaccharomyces parabailii T7SS-4W1, were used mono- co-culture fermentations. monocultures highlighted important species-specific differences metabolism sugars organic acids, while binary co-cultures demonstrated roles played by yeasts cellulose typical volatile acidity. Aroma complexity sensory perception comparable between reconstructed (with three strains) native consortia. This study provided broad picture strains' metabolic signatures, facilitating standardization order obtain product desired characteristics modulating presence or abundance.

Language: Английский

Citations

31