Molecular Ecology,
Journal Year:
2021,
Volume and Issue:
31(4), P. 1180 - 1195
Published: Nov. 30, 2021
Comparison
of
the
spatial
distribution
and
assembly
processes
between
bulk
rhizosphere
bacterial
communities
at
multiple
scales
is
vital
for
understanding
generation
maintenance
microbial
diversity
under
influence
plants.
However,
biogeographical
patterns
underlying
mechanisms
in
sediments
aquatic
ecosystems
remain
unclear.
Here,
we
collected
140
sediment
samples
Phragmites
australis
from
14
lakeshore
zones
across
a
510-km
transect
Middle-Lower
Yangtze
plain.
We
performed
high-throughput
sequencing
to
investigate
diversity,
composition,
these
samples.
Bacterial
exhibited
higher
alpha
but
lower
beta
than
those
sediment.
Both
had
significant
distance-decay
relationships,
turnover
community
was
strikingly
that
Despite
variable
selection
dominating
sediment,
P.
enhanced
role
dispersal
limitation
governing
communities.
The
relative
importance
different
ecological
determining
presented
distinct
increasing
or
decreasing
linearly
with
an
increase
scale.
This
investigation
highlights
convergent
plant
surrounding
emphasizes
on
environments
over
scales.
Furthermore,
provide
preliminary
framework
exploring
scale
dependence
ecosystems.
mSystems,
Journal Year:
2021,
Volume and Issue:
6(2)
Published: March 23, 2021
The
relationships
between
soil
biodiversity
and
ecosystem
functions
are
an
important
yet
poorly
understood
topic
in
microbial
ecology.
This
study
presents
exploratory
effort
to
gain
predictive
understanding
of
the
factors
driving
diversity
potential
nutrient
cycling
complex
terrestrial
ecosystems.
Functional Ecology,
Journal Year:
2022,
Volume and Issue:
36(6), P. 1378 - 1395
Published: Feb. 21, 2022
Abstract
Soil
enzymes
are
central
to
ecosystem
processes
because
they
mediate
numerous
reactions
that
essential
in
biogeochemical
cycles.
However,
how
soil
enzyme
activities
will
respond
global
warming
is
uncertain.
We
reviewed
the
literature
on
mechanisms
linking
temperature
effects
and
microbial
communities,
outlined
a
conceptual
overview
these
changes
may
influence
carbon
fluxes
terrestrial
ecosystems.
At
scale,
although
can
have
positive
effect
enzymatic
catalytic
power
short
term
(i.e.
via
instantaneous
response
of
activity),
this
be
countered
over
time
by
inactivation
reduced
substrate
affinity.
short‐term
increase
accelerated
synthesis
turnover,
but
shifts
community
composition
growth
efficiency
long
term.
Although
increasing
accelerate
labile
decomposition
months
years,
our
review
highlights
initial
stage
followed
following
phases:
(a)
reduction
loss,
due
changing
use
among
communities
or
depletion,
which
together
decrease
biomass
activity
(b)
an
acceleration
structure
greater
allocation
oxidative
for
recalcitrant
degradation.
Studies
bridge
scales
space
required
assess
whether
there
attenuation
loss
through
very
conclude
determine
sensitivity
warming,
traits
change
time.
Improving
representation
models
requires
long‐term
studies
characterize
wide‐ranging
hydrolytic
traits—catalytic
power,
kinetics,
inactivation—and
responses
govern
synthesis.
Read
free
Plain
Language
Summary
article
Journal
blog.
Nature Communications,
Journal Year:
2022,
Volume and Issue:
13(1)
Published: July 20, 2022
Abstract
Soil
microorganisms
are
central
to
sustain
soil
functions
and
services,
like
carbon
nutrient
cycling.
Currently,
we
only
have
a
limited
understanding
of
the
spatial-temporal
dynamics
microorganisms,
restricting
our
ability
assess
long-term
effects
climate
land-cover
change
on
microbial
roles
in
biogeochemistry.
This
study
assesses
temporal
trends
biomass
identifies
main
drivers
regionally
globally
detect
areas
sensitive
these
environmental
factors.
Here,
combined
global
data
set,
random
forest
modelling,
layers
predict
stocks
from
1992
2013.
decreased
by
3.4
±
3.0%
(mean
95%
CI)
between
2013
for
predictable
regions,
equivalent
149
Mt
being
lost
over
period,
or
~1‰
C.
Northern
with
high
experienced
strongest
decrease,
mostly
driven
increasing
temperatures.
In
contrast,
was
weaker
driver
carbon,
but
had,
some
cases,
important
regional
effects.
Proceedings of the National Academy of Sciences,
Journal Year:
2024,
Volume and Issue:
121(6)
Published: Jan. 29, 2024
Microbial
interactions
are
key
to
maintaining
soil
biodiversity.
However,
whether
negative
or
positive
associations
govern
the
microbial
system
at
a
global
scale
remains
virtually
unknown,
limiting
our
understanding
of
how
microbes
interact
support
biodiversity
and
functions.
Here,
we
explored
ecological
networks
among
multitrophic
organisms
involving
bacteria,
protists,
fungi,
invertebrates
in
survey
across
20
regions
planet
found
that
both
pairs
triads
taxa
governed
networks.
We
further
revealed
with
greater
levels
supported
larger
resulted
lower
network
fragility
withstand
potential
perturbations
species
losses.
Our
study
provides
unique
evidence
widespread
between
their
crucial
role
structure
worldwide.
Global Ecology and Biogeography,
Journal Year:
2021,
Volume and Issue:
30(7), P. 1488 - 1501
Published: May 19, 2021
Abstract
Aim
A
predictive
understanding
of
the
mechanisms
underlying
microbial
biogeographical
patterns
is
great
interest,
particularly
with
respect
to
phylogenetic
distributions
their
ecological
adaptations.
Here,
we
test
whether
information
can
predict
distributions,
community
assembly
and
species
co‐occurrence
soil
archaea.
Location
Northern
China.
Time
period
July
August
2017.
Major
taxa
studied
Archaeal
communities.
Methods
By
conducting
a
large‐scale
(transect
intervals
1,257.6
km)
study
across
agricultural
field,
forest,
wetland,
grassland
desert
biomes,
applied
framework
niche
conservatism
investigate
archaeal
biogeography,
network
topology.
We
examined
signal
based
on
Blomberg's
K
environmental
preference
given
taxon
was
related
phylogeny,
corresponding
degree
for
niches
complex
gradients.
evaluated
processes
communities
null
model
Sloan
neutral
analyses.
then
explored
major
factors
that
influenced
coexistence
Results
Soil
exhibited
strong
climate‐related
preferences.
Mean
annual
precipitation
(MAP)
had
strongest
signal,
this
mediated
both
coexistence,
stronger
deterministic
less
in
environments
lower
precipitation.
Phylogenetic
diversity
closely
linked
balance
processes;
is,
stochastic
were
dominant
low‐diversity
communities,
whereas
variable
selection
promoted
high
diversity.
Main
conclusions
conclude
archaea
drives
distributions.
Our
findings
represent
considerable
advance
linking
therefore
forecasting
evolutionary
adaptations
response
ongoing
changes.
Computational and Structural Biotechnology Journal,
Journal Year:
2021,
Volume and Issue:
19, P. 1200 - 1213
Published: Jan. 1, 2021
Wheat
is
one
of
the
world's
most
important
crops,
but
its
production
relies
heavily
on
agrochemical
inputs
which
can
be
harmful
to
environment
when
used
excessively.
It
well
known
that
a
multitude
microbes
interact
with
eukaryotic
organisms,
including
plants,
and
sum
their
functions
associated
given
host
termed
microbiome.
Plant-microbe
interactions
beneficial,
neutral
or
plant.
Over
last
decade,
development
next
generation
DNA
sequencing
technology,
our
understanding
plant
microbiome
structure
has
dramatically
increased.
Considering
defining
wheat
key
leverage
crop
in
sustainable
way,
here
we
describe
how
different
factors
drive
assembly
wheat,
management,
edaphic-environmental
conditions
selection.
In
addition,
highlight
benefits
take
multidisciplinary
approach
define
explore
core
generate
solutions
based
microbial
(synthetic)
communities
single
inoculants.
Advances
research
will
facilitate
strategies
guarantee
intensification
production.
Ecological Indicators,
Journal Year:
2021,
Volume and Issue:
129, P. 107932 - 107932
Published: June 28, 2021
Uneven-aged
silvicultural
practices
can
maintain
habitat
continuity
and
enhance
biodiversity.
Soil
microorganisms
play
critical
roles
in
multiple
ecosystem
functions
(i.e.,
multifunctionality).
However,
little
is
currently
known
regarding
the
role
of
microbial
community
driving
soil
nutrient
cycling
multifunctionality
(SMF)
uneven-aged
mixed
plantations.
In
this
study,
we
investigated
bacterial
fungal
compositions
diversities,
single-function
related
carbon
(C),
nitrogen
(N),
phosphorus
(P)
cycling,
SMF
indices
monoculture
plantation
(as
a
control)
three
stands
(4,
7,
11
years
old).
Our
results
demonstrated
that
C,
N,
P
plantations
increased
by
17.9–55.2%,
20.0–54.0%,
0.7–21.6%,
16.3–30.1%
compared
to
plantation.
The
alpha
diversity
(richness
Shannon
diversity),
significantly
improved
with
stand
age,
but
showed
less
variation.
beta
diversities
bacteria
fungi
notable
variation
age
were
predominantly
affected
properties
(soil
organic
total
P,
C/N
ratio),
respectively.
Additionally,
temporal
turnover
within
was
higher
than
rates
community.
biomass
more
sensitive
structure
change
over
short
period
(11
years)
biomass.
Furthermore,
fungi/bacteria
(F/B)
ratio
strongly
positively
correlated
SMF.
Most
importantly,
abundant
taxa
(e.g.,
Mucoromycota
Mortierellomycota)
major
drivers
SMF,
followed
rare
Nitrospirae
Elusimicrobia).
These
findings
indicate
communities
have
different
responses
undertake
important
maintaining
when
converted
into
an