Nutrients,
Journal Year:
2024,
Volume and Issue:
16(21), P. 3580 - 3580
Published: Oct. 22, 2024
Probiotics,
particularly
those
native
to
the
gut
microbiota,
have
a
profound
influence
on
environment.
In
this
study,
we
conducted
randomized
placebo-controlled,
double-blind,
parallel-group
comparison
trial
investigate
effects
of
Bifidobacterium
longum
BB536
(B.
BB536)
fecal
microbiota
and
metabolite
compositions
in
healthy
individuals.
We
compared
fermented
milk
produced
solely
with
Streptococcus
thermophiles
Lactobacillus
bulgaricus
(placebo
group)
supplemented
B.
(BY
group).
Our
findings
revealed
significantly
greater
relative
abundance
Faecalibacterium
BY
group
than
placebo
by
3rd
day,
trend
that
persisted
until
end
17th
day.
Additionally,
presented
increased
concentrations
tryptophan
(Trp),
Indole-3-lactic
acid,
Indole-3-aldehyde
A
significant
positive
correlation
was
observed
between
number
viable
bacteria
feces.
The
Trp
Indole-3-acetic
acid
were
also
correlated
results
suggest
intake
can
modulate
profiles,
which
are
general
indicators
for
monitoring
environment,
potentially
conferring
health
benefits
host.
International Immunology,
Journal Year:
2024,
Volume and Issue:
unknown
Published: June 13, 2024
Abstract
The
intricate
and
dynamic
tryptophan
(Trp)
metabolic
pathway
in
both
the
microbiome
host
cells
highlights
its
profound
implications
for
health
disease.
This
involves
complex
interactions
between
cellular
bacteria
processes,
producing
bioactive
compounds
such
as
5-hydroxytryptamine
(5-HT)
kynurenine
derivatives.
Immune
responses
to
Trp
metabolites
through
specific
receptors
have
been
explored,
highlighting
role
of
aryl
hydrocarbon
receptor
inflammation
modulation.
Dysregulation
this
is
implicated
various
diseases,
Alzheimer’s
Parkinson’s
mood
disorders,
neuronal
autoimmune
diseases
multiple
sclerosis
(MS),
cancer.
In
article,
we
describe
impact
5-HT,
Trp,
indole,
on
Furthermore,
review
microbiome-derived
that
affect
immune
contribute
maintaining
homeostasis,
especially
an
experimental
encephalitis
model
MS.
International Journal of Molecular Sciences,
Journal Year:
2024,
Volume and Issue:
25(16), P. 9082 - 9082
Published: Aug. 21, 2024
Kynurenic
acid
(KYNA)
is
an
antioxidant
degradation
product
of
tryptophan
that
has
been
shown
to
have
a
variety
cytoprotective,
neuroprotective
and
neuronal
signalling
properties.
However,
mammalian
transporters
receptors
display
micromolar
binding
constants;
these
are
consistent
with
its
typically
tissue
concentrations
but
far
above
serum/plasma
concentration
(normally
tens
nanomolar),
suggesting
large
gaps
in
our
knowledge
transport
mechanisms
action,
the
main
influx
characterized
date
equilibrative,
not
concentrative.
In
addition,
it
substrate
known
anion
efflux
pump
(ABCC4),
whose
vivo
activity
largely
unknown.
Exogeneous
addition
L-tryptophan
or
L-kynurenine
leads
production
KYNA
also
many
other
co-metabolites
(including
some
such
as
3-hydroxy-L-kynurenine
quinolinic
may
be
toxic).
With
exception
chestnut
honey,
exists
at
relatively
low
levels
natural
foodstuffs.
bioavailability
reasonable,
terminal
element
irreversible
reaction
most
pathways,
might
added
exogenously
without
disturbing
upstream
metabolism
significantly.
Many
examples,
which
we
review,
show
valuable
bioactivity.
Given
above,
review
potential
utility
nutraceutical,
finding
significantly
worthy
further
study
development.
Molecular Neurobiology,
Journal Year:
2024,
Volume and Issue:
61(8), P. 6031 - 6044
Published: Jan. 24, 2024
Several
studies
have
linked
branched-chain
amino
acid
(BCAA)
metabolism
disorders
with
autism
spectrum
disorder
(ASD),
but
the
results
been
inconsistent.
The
purpose
of
this
study
was
to
explore
association
between
BCAA
concentrations
and
risk
ASD.
A
total
313
participants
were
recruited
from
two
tertiary
referral
hospitals
May
2018
July
2021.
Concentrations
BCAAs
in
dried
blood
spots
analyzed
using
liquid
chromatography-tandem
mass
spectrometry-based
analysis.
Multivariate
analyses
restricted
cubic
spline
models
used
identify
ASD,
a
nomogram
developed
by
multivariate
logistic
regression
determined
receiver
operating
characteristic
curve
analysis
calibration
BCAA,
valine,
leucine/isoleucine
higher
ASD
group,
all
them
positively
non-linearly
associated
even
after
adjusting
for
potential
confounding
factors
such
as
age,
gender,
body
index,
(P
<
0.05).
integrating
valine
showed
good
discriminant
AUC
value
0.756
(95%
CI
0.676-0.835).
model
could
yield
net
benefits
across
reasonable
range
thresholds.
In
stratified
analysis,
diagnostic
ability
more
pronounced
children
older
than
3
years.
We
provide
evidence
that
increased
levels
are
presented
here
can
serve
marker
early
diagnosis
medRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2025,
Volume and Issue:
unknown
Published: Feb. 4, 2025
ABSTRACT
BACKGROUND
Towards
improving
outcomes
for
adolescents
with
obesity,
we
aimed
to
define
metabolic
and
microbiome
phenotypes
at
baseline
post-weight
loss
intervention.
METHODS
The
Pediatric
Obesity
Microbiome
Metabolism
Study
enrolled
220
aged
10-18
severe
obesity
(OB)
67
healthy
weight
controls
(HWC).
Blood,
stool,
clinical
measures
were
collected
after
a
6-month
intervention
the
OB
group.
Serum
metabolomic
fecal
data
analyzed
associations
BMI,
insulin
resistance,
inflammation.
Fecal
transplants
performed
on
germ-free
mice
using
samples
from
both
groups
assess
gain
changes.
RESULTS
Adolescents
exhibited
elevated
serum
branched-chain
amino
acids
(BCAA)
but
reduced
ketoacid
metabolites
(BCKA)
compared
HWC.
This
pattern
was
sex-
age-dependent,
unlike
adults
OB,
who
showed
levels
of
both.
microbiomes
HWC
had
similar
diversity
differed
in
membership
functional
potential.
FMT
donors
effects
mouse
body
weight,
specific
taxa
linked
recipients.
Longitudinal
analysis
identified
microbial
features
correlated
changes
health
during
CONCLUSION
have
unique
adaptations
signatures
their
counterparts
OB.
TRIAL
REGISTRATION
ClinicalTrials.gov
Identifier:
NCT03139877
(Observational
Study)
NCT02959034
(Repository)
FUNDING
SOURCES
American
Heart
Association
Grants:
17SFRN33670990,
20PRE35180195
National
Institute
Diabetes
Digestive
Kidney
Diseases
Grant:
R24-DK110492
BioFactors,
Journal Year:
2025,
Volume and Issue:
51(1)
Published: Jan. 1, 2025
Compared
to
the
well-defined
immune-modulating
effect
of
butyrate,
understanding
other
protein
fermentation
metabolites
is
limited.
This
study
aimed
investigate
impact
protein-derived
(valerate,
branched-chain
fatty
acids,
ammonium,
phenol,
p-Cresol,
indole,
and
hydrogen
sulfide)
on
cytokine
production
in
murine
bone
marrow-derived
dendritic
cells
(BMDCs)
stimulated
with
lipopolysaccharides
(LPS),
Lactobacillus
acidophilus
NCFM,
or
Staphylococcus
aureus
USA300.
Some
metabolites,
but
not
short-chain
acids
(SCFAs),
strongly
affected
cell
viability.
After
short-term
treatment
depending
microbial
stimulus,
SCFAs
profile
similarly
weaker
than
as
reflected
by
inhibition
IL-12p70
IL-10
enhanced
IL-23
(LPS
S.
USA300)
IL-1β
production.
valerate
exhibited
a
slower
expression.
Two-day
butyrate
resulted
similar
effects,
that
is,
LPS-induced
IL-12
abrogation
enhancement,
increased
aryl
hydrocarbon
receptor
(Ahr)
expression,
after
LPS
stimulation,
expression
dual
specificity
phosphatase
1
(Dusp1).
In
conclusion,
low
toxicity
modulated
microbially
BMDCs.
Valerate
showed
strongest
effect,
which
was
dependent
specific
stimulation
course
SCFA
treatment.
Our
work
adds
knowledge
regarding
role
from
gut
bacterial
immune
system.
Trends in Plant Science,
Journal Year:
2025,
Volume and Issue:
unknown
Published: March 1, 2025
HighlightsNitrogen
fertilizer
use
has
driven
reactive
nitrogen
pools
beyond
safe
limits,
threatening
environmental
sustainability.Microbiome-associated
phenotypes
(MAPs)
are
microbially
mediated
traits
that
directed
by
the
plant
genome
and
contribute
to
health,
including
acquisition
retention.MAPs
aid
biological
fixation
in
non-leguminous
crop
species
sustainable
N
acquisition.Biological
nitrification
denitrification
inhibition
additional
MAPs
can
rhizosphere
retention,
but
their
effectiveness
requires
consideration
of
factors
avoid
unintended
loss.Advancing
MAP
development
through
'trait
stacking'
–
strategically
combining
microbiome-associated
enhance
performance,
should
also
strive
ensure
systemic
adaptations
needed
for
equitable
genetic
resources.AbstractCrop
microbiomes
promote
health
various
mechanisms,
nutrient
provisioning.
However,
agriculture
neglected
importance
these
conventional
management
approaches
originating
from
Green
Revolution.
Revolution
innovations,
such
as
fertilizers
high-yielding
germplasm,
supported
an
increase
global
yields.
Yet
advances
led
many
issues,
disruptions
transformations
have
reduced
reliance
on
acquisition.
Overcoming
challenges
introduced
a
shift
toward
ecologically
informed
agronomic
strategies
incorporate
into
breeding
decisions.
Agriculture
Anthropocene
needs
mindfully
manage
decouple
agrochemical
inputs
profitable
yields,
minimizing
repercussions
modern
agriculture.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2025,
Volume and Issue:
unknown
Published: April 16, 2025
Abstract
As
rapidly
growing
bacteria
begin
to
exhaust
nutrients,
their
growth
rate
slows,
ultimately
leading
the
non-replicative
state
of
quiescence.
Adaptation
nutrient
limitation
requires
widespread
metabolic
remodeling
that
is
in
part
mediated
by
phosphorylated
nucleotides
guanosine
tetra-
and
penta-phosphate,
collectively
(p)ppGpp.
We
have
developed
a
novel
reporter
(p)ppGpp
abundance
Gram-positive
bacterium
Bacillus
subtilis
based
on
recent
identification
riboswitch
binds
modulates
transcription
via
regulation
transcriptional
terminator.
Placement
an
unstable
reporter,
firefly
luciferase,
downstream
allows
for
sensitive
dynamic
assessment
first
confirm
accurately
reflects
variety
well-established
conditions.
then
proceed
use
it
demonstrate
physiological
importance
several
mechanisms
metabolism
previously
observed
only
vitro
including
allosteric
interactions
between
synthesis
enzymes
hydrolytic
activity
synthase.
signaling
has
been
implicated
gene
expression,
we
close
temporal
association
expression
abundance,
indicating
rapid,
therefore
likely
direct
mechanism
dependent
activation.
Thus,
this
provides
new,
comprehensive
analysis
vivo
offers
potential
ability
sensitively
monitor
dynamics
under
diverse
environmental
Author
Summary
Most
adapt
stressful
conditions
such
as
synthesizing
molecule,
known
ppGpp,
consists
hyper-phosphorylated
GTP.
Synthesis
ppGpp
affects
most
aspects
cellular
physiology
replication,
translation.
present
here
method
time
measurement
living
cells,
greatly
facilitating
investigation
into
metabolism.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2025,
Volume and Issue:
unknown
Published: April 19, 2025
Abstract
Restricting
dietary
protein
intake
has
metabolic
and
physiological
benefits
for
animals.
Rodent
studies
have
identified
the
involvement
of
a
hormone
fibroblast
growth
factor
21
(FGF21),
which
is
upregulated
by
sensing
amino
acid
scarcity.
However,
to
what
extent
this
mechanism
conserved
in
primates
remains
elusive.
Using
common
marmosets
Callithrix
jacchus
as
non-human
primate
model,
we
demonstrate
protocol
restriction
manipulation.
Low
diet
induces
decrease
blood
urea
nitrogen,
altered
plasma
profiles,
an
increase
FGF21.
Supplementation
purified
acids
suppresses
features
restriction.
Our
data
provide
intervention
technique
insight
into
evolutionarily
FGF21
induction
during