Identifying genes associated with genetic control of color polymorphism in the pearl oyster Pinctada margaritifera var. cumingii (Linnaeus 1758) using a comparative whole genome pool‐sequencing approach DOI Creative Commons
Pierre‐Louis Stenger, Chin‐Long Ky, Jérémie Vidal‐Dupiol

et al.

Evolutionary Applications, Journal Year: 2022, Volume and Issue: 16(2), P. 408 - 427

Published: Aug. 2, 2022

For hundreds of years, the color diversity Mollusca shells has been a topic interest for humanity. However, genetic control underlying expression is still poorly understood in mollusks. The pearl oyster Pinctada margaritifera increasingly becoming biological model to study this process due its ability produce large range colors. Previous breeding experiments demonstrated that phenotypes were partly under control, and while few genes found comparative transcriptomics epigenetic experiments, variants associated with have not yet investigated. Here, we used pooled-sequencing approach on 172 individuals investigate color-associated three economic farming, wild one hatchery populations. While our results uncovered SNPs targeting pigment-related already identified previous studies, such as PBGD, tyrosinases, GST, or FECH, also new color-related occurring same pathways, like CYP4F8, CYP3A4, CYP2R1. Moreover, involved novel pathways unknown be shell coloration P. margaritifera, carotenoid pathway, BCO1. These findings are essential possibly implement future programs focused individual selection specific production oysters improve footprint perliculture Polynesian lagoon by producing less but better quality.

Language: Английский

CgPPOX and CgFECH Mediate Protoporphyrin IX Accumulation Predominantly in the Outer Mantle Fold of Pacific Oyster Crassostrea gigas DOI
Biyang Hu, Hong Yu,

Lingfeng Kong

et al.

Marine Biotechnology, Journal Year: 2025, Volume and Issue: 27(1)

Published: Feb. 1, 2025

Language: Английский

Citations

1

Evo-devo of shell colour in gastropods and bivalves DOI Creative Commons
Suzanne V. Saenko, Menno Schilthuizen

Current Opinion in Genetics & Development, Journal Year: 2020, Volume and Issue: 69, P. 1 - 5

Published: Dec. 31, 2020

Recent technical innovations are revealing surprising patterns in mollusc shell pigmentation, such as an unexpectedly modest role for melanins and rapid divergences the mix of pigments used to achieve similar colour patterns. The elucidation molecular genetic basis pigmentation has been slow, probably because high genome complexity gastropods bivalves. work within old field evolutionary ecology allows a greater analysis large-geographic-scale (sometimes employing citizen-science data), well experimental studies. However, remains dominated by land snails model organisms, while pattern evolution marine bivalves, particularly those not exposed visual predators, mysterious.

Language: Английский

Citations

32

Identification of the CYP gene family: insights into carotenoid metabolism associated with red shell in Meretrix meretrix DOI

Heming Shi,

Lulu Fu,

Yinghui Dong

et al.

Aquaculture International, Journal Year: 2025, Volume and Issue: 33(4)

Published: March 27, 2025

Language: Английский

Citations

0

Feeding, digestion and nutrition of marine bivalve suspension-feeders - a synopsis DOI
Chris Langdon

Elsevier eBooks, Journal Year: 2025, Volume and Issue: unknown, P. 743 - 811

Published: Jan. 1, 2025

Language: Английский

Citations

0

Shell Colour Diversity in Marine Molluscs: From Current Knowledge to Future Aquaculture Applications DOI
Biyang Hu, Yu Hong,

Chengxun Xu

et al.

Reviews in Aquaculture, Journal Year: 2025, Volume and Issue: 17(3)

Published: May 23, 2025

ABSTRACT Mollusc shell colour represents an important economic trait contributing to product marketability in aquaculture. Marine molluscs with diverse colours and patterns are valuable models for animal colouration mechanisms study. Recent progress marine mollusc research has been propelled by investigations of shell‐colour variants, advancements high‐throughput sequencing technologies, into metabolic regulatory pigment biosynthesis. This review synthesizes current genetic architecture, gene networks processes governing variation molluscs. In this review, insights gained from studies uncover inheritance patterns, key loci present shell‐colour‐related transcriptomic datasets along integrative multi‐omics studies. Moreover, distribution, functional linkages major pigments (melanin, carotenoids, porphyrins) characterized, while ommochromes also discussed. Furthermore, environmental, dietary structural factors influencing listed. By synthesizing findings, offers a detailed overview the common across species probes potential implications Future directions emphasize characterization, transport mechanism approaches bridge chemical understandings. summary, outlines on colouration, provides referable molluscs, enhances understanding mechanisms.

Language: Английский

Citations

0

Identifying a melanogenesis-related candidate gene by a high-quality genome assembly and population diversity analysis in Hypsizygus marmoreus DOI
Gang Wang,

Lianfu Chen,

Weiqi Tang

et al.

Journal of genetics and genomics/Journal of Genetics and Genomics, Journal Year: 2021, Volume and Issue: 48(1), P. 75 - 87

Published: Jan. 1, 2021

Language: Английский

Citations

21

Integrated Analysis of Coding Genes and Non-coding RNAs Associated with Shell Color in the Pacific Oyster (Crassostrea gigas) DOI

Zhuanzhuan Li,

Qi Li, Shikai Liu

et al.

Marine Biotechnology, Journal Year: 2021, Volume and Issue: 23(3), P. 417 - 429

Published: April 30, 2021

Language: Английский

Citations

21

De novo assembly transcriptome analysis reveals the preliminary molecular mechanism of pigmentation in juveniles of the hard clam Mercenaria mercenaria DOI Creative Commons
Zhi Hu, Hao Song, Cong Zhou

et al.

Genomics, Journal Year: 2020, Volume and Issue: 112(5), P. 3636 - 3647

Published: April 27, 2020

Language: Английский

Citations

23

Evaluation of Small Molecular Polypeptides from the Mantle of Pinctada Martensii on Promoting Skin Wound Healing in Mice DOI Creative Commons
Faming Yang, Xiaoming Qin, Ting Zhang

et al.

Molecules, Journal Year: 2019, Volume and Issue: 24(23), P. 4231 - 4231

Published: Nov. 21, 2019

Skin wound healing, especially chronic is a common challenging clinical problem. It urgent to broaden the sources of bioactive substances that can safely and efficiently promote skin healing. This study aimed observe effects small molecular peptides (SMPs) mantle Pinctada martensii on After physicochemical analysis amino acids mass spectrometry SMPs, effect SMPs promoting healing was studied through whole cortex model back mice for 18 consecutive days. The results showed consisted polypeptides with weight 302.17-2936.43 Da. content containing 2-15 accounted 73.87%, hydrophobic 56.51%. Results in vitro experimentation possess procoagulant effect, but no antibacterial activity. vivo experiments indicated inhibit inflammatory response by secretion anti-inflammatory factor IL-10 during phase; proliferative phase, proliferation fibroblasts keratinocytes. transforming growth factor-β1 cyclin D1 accelerates epithelialization contraction wounds. In effectively collagen deposition partially superficial scar hyperplasia. These show promotes dermal have tremendous potential development utilization

Language: Английский

Citations

20

Transcriptome analysis based on dietary beta-carotene supplement reveals genes potentially involved in carotenoid metabolism in Crassostrea gigas DOI
Sai Wan, Qi Li, Hong Yu

et al.

Gene, Journal Year: 2022, Volume and Issue: 818, P. 146226 - 146226

Published: Jan. 19, 2022

Language: Английский

Citations

12