bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2022,
Volume and Issue:
unknown
Published: April 1, 2022
Abstract
The
black
carpenter
ant
(
Camponotus
pennsylvanicus
)
is
a
pest
species
found
widely
throughout
North
America
east
of
the
Rocky
Mountains.
Its
frequent
infestation
in
human
buildings
justifies
close
genetic
examination
and
its
large
size
small
genome
make
it
ideal
for
individual
sequencing.
From
single
I
used
long-read
nanopore
sequencing
to
assemble
306
Mb,
with
an
N50
565
Kb,
60X
coverage,
quality
assessed
by
97.0%
BUSCO
score,
improving
upon
related
assemblies.
reads
provided
secondary
information
form
parasitic
symbiont
genomes,
as
well
epigenetic
information.
assembled
complete
Wolbachia
bacterial
isolate
1.2
Mb
76X
commensal
bacterium
tribe,
species-specific
Blochmannia
,
at
791
2400X
which
matched
within
200
bp
previously
published
reference.
also
produced
mitochondrial
over
5000X
revealing
minor
rearrangements
first
assembly
this
species.
DNA
methylation
hydroxymethylation
was
measured
simultaneously
whole
genome,
base-pair
resolution
level
from
same
confirmed
extremely
low
levels
seen
Formicidae
family
Hymenoptera.
A
phased
diploid
built,
moderate
heterozygosity,
0.16%
bases
having
biallelic
SNPs
two
parental
haplotypes.
Protein
prediction
yielded
20,209
putative
amino
acid
sequences
annotation
identified
86%
known
proteins.
All
assemblies
were
derived
Minion
flow
cell
generating
20
Gb
sequence
cost
$1047
including
all
consumable
reagents.
Adding
fixed
costs
required
equipment
batch
reagents
brings
ant-sized
less
than
$5000.
Complete
analysis
performed
under
1
week
on
commodity
computer
desktop
64
memory.
Genetics and Molecular Biology,
Journal Year:
2024,
Volume and Issue:
47(suppl 1)
Published: Jan. 1, 2024
Animals
adapt
to
the
daily
changes
in
their
environmental
conditions
by
means
of
genetically
encoded
circadian
clocks.
These
clocks,
found
throughout
tree
life,
regulate
diverse
biological
functions,
and
allow
periodical
physiology
behaviour.
The
molecular
underpinnings
these
clocks
have
been
extensively
studied
across
taxa,
revealing
a
brain-based
system
that
coordinates
rhythmic
activities
through
neuronal
networks
signalling
pathways.
Entrainment,
alignment
internal
rhythms
with
external
cues
or
zeitgebers,
is
crucial
for
adaptive
value
While
solar
light-dark
cycle
primary
zeitgeber
most
animals,
other
relevant
such
as
temperature,
meal
timing,
predators,
anxiety,
fear,
physical
activity,
social
interactions
also
play
roles
entraining
search
detailed
description
goal
neurobiology
an
area
growing
societal
interests.
Moreover,
disruptions
are
implicated
various
diseases,
understanding
entrainment
pathways
contributes
developing
interventions
improved
wellbeing
health
outcomes.
This
review
focuses
on
socially
cues,
examining
impact
animal
behaviour,
explores
sensory
transmitting
information
central
clock.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Jan. 20, 2023
ABSTRACT
Background
Behavioral
plasticity
in
the
nocturnal
ant
Camponotus
floridanus
is
associated
with
changes
daily
rhythms
of
core
clock
and
clock-controlled
genes
brain.
Plasticity
output,
although
adaptive,
has
been
hypothesized
to
be
a
target
for
parasites
that
change
host
behavior
timely
manner
complete
their
life
cycle.
This
study
aims
explore
this
hypothesis
by
characterizing
how
transcriptomic
upon
infection
manipulating
parasite.
We
compared
contrasted
gene
expression
profile
uninfected
C.
heads
ants
infected
fungal
parasite
Ophiocordyceps
camponoti-floridani
non-manipulating
fungus
Beauveria
bassiana
,
test
if
are
specific
behavioral
modifying
diseases,
or
such
general
hallmark
infectious
diseases.
Results
The
repertoire
oscillating
every
24h
showed
almost
three-fold
reduction
during
O.
infections,
as
controls.
Control-like
activity
24h-rhythmic
was
maintained
but
not
B.
heads.
Half
all
brains
displayed
highly
synchronized
rhythmic
both
species-specific
manner.
Network
analyses
revealed
affected
same
links
between
albeit
different
Conclusion
Changes
hosts
might
However,
infection-associated
species-specific,
likely
depends
on
history
strategies
used
The Journal of Comparative Neurology,
Journal Year:
2023,
Volume and Issue:
531(8), P. 853 - 865
Published: March 9, 2023
Concerted
developmental
programming
may
constrain
changes
in
component
structures
of
the
brain,
thus
limiting
ability
selection
to
form
an
adaptive
mosaic
size-variable
brain
compartments
independent
total
size
or
body
size.
Measuring
patterns
gene
expression
underpinning
scaling
conjunction
with
anatomical
atlases
can
aid
identifying
influences
concerted
and/or
evolution.
Species
exhibiting
exceptional
and
behavioral
polyphenisms
provide
excellent
systems
test
predictions
evolution
models
by
quantifying
expression.
We
examined
a
remarkably
polymorphic
behaviorally
complex
social
insect,
leafcutter
ant
Atta
cephalotes.
The
majority
significant
differential
observed
among
three
morphologically,
behaviorally,
neuroanatomically
differentiated
worker
groups
was
attributable
However,
we
also
found
evidence
unexplained
morphological
variation
transcriptomic
analysis
identified
not
linearly
correlated
but
sometimes
mirroring
neuropil
scaling.
Additionally,
enriched
ontology
terms
associated
nucleic
acid
regulation,
metabolism,
neurotransmission,
sensory
perception,
further
supporting
relationship
between
expression,
mosaicism,
labor
role.
These
findings
demonstrate
that
workers
underpins
neuroanatomical
differentiation
agrarian
division
A.
Genome Biology and Evolution,
Journal Year:
2023,
Volume and Issue:
15(7)
Published: June 26, 2023
Rudimentary
social
systems
have
the
potential
to
both
advance
our
understanding
of
how
complex
sociality
may
evolved
and
changes
in
environment
influence
gene
expression
cooperation.
Recently,
studies
primitively
Hymenoptera
greatly
expanded
empirical
evidence
for
role
shaping
behavior
expression.
Here,
we
compare
brain
profiles
foragers
across
contexts
small
carpenter
bee,
Ceratina
calcarata.
We
conducted
experimental
manipulations
field
colonies
examine
among
including
foraging
mothers,
regular
daughters,
worker-like
dwarf
eldest
daughters
presence
absence
mother.
Our
analysis
found
significant
differences
associated
with
female
age,
reproductive
status,
environment,
circadian
clock
dyw,
hexamerin,
genes
involved
regulation
juvenile
hormone
chemical
communication.
also
that
candidate
differentially
expressed
study
were
division
labor,
foraging,
other
advanced
eusocial
insects.
results
offer
key
developmental
hormones
rhythms
producing
cooperative
rudimentary
insect
societies.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2022,
Volume and Issue:
unknown
Published: Sept. 12, 2022
ABSTRACT
Coevolutionary
relationships
between
parasites
and
their
hosts
can
lead
to
the
emergence
of
diverse
phenotypes
over
time,
as
seen
in
Ophiocordyceps
fungi
that
manipulate
insect
arachnid
behaviour
aid
fungal
spore
transmission.
The
most
conspicuous
examples
are
found
ants
Camponotini
tribe,
colloquially
known
“zombie
ants”.
While
behaviours
induced
during
infection
well
described,
molecular
underpinnings
remain
unknown.
Recent
genomics
transcriptomics
analyses
camponoti-floridani
have
identified
several
highly
upregulated
biomolecules
produced
by
fungus
Camponotus
floridanus
.
Among
them
is
an
ergot
alkaloid
related
mycotoxin
aflatrem,
cause
“staggers
syndrome”
cows.
Staggering,
defined
unsteady
movements
side
side,
also
observed
C.
late-stage
infection.
To
test
if
aflatrem-like
compounds
could
be
responsible,
we
injected
healthy
with
aflatrem
recorded
for
30
minutes.
Using
both
automated
object-tracking
software
MARGO
manual
behavioural
quantification,
reduced
ant
activity
speed,
increased
staggering
behaviours.
examine
underlying
transcriptomic
changes,
performed
RNA-Seq
on
heads
aflatrem-injected
ants,
keeping
step
previous
work
-manipulated
ants.
We
261
genes
were
significantly
dysregulated
compared
sham-injected
controls.
When
data
from
groups
shared
113
differentially
regulated
genes.
These
included
sensory
neuron
membrane
protein
genes,
odorant-binding
musculoskeletal
such
titin
obscurin
Together,
these
results
indicate
affect
neuromuscular
function
conservation
staggers
phenotype
Bos
taurus
suggests
manipulating
strategies
exhibited
across
Tree
Life
may
more
similar
approach,
not
widely
different
application,
than
realize.
Agriculture,
Journal Year:
2022,
Volume and Issue:
12(7), P. 952 - 952
Published: June 30, 2022
The
division
of
labor
is
a
dominant
characteristic
honeybees
and
accompanied
by
behavioral
specialization
cognitive
enhancement.
As
the
central
nervous
system
to
control
labor-specific
behaviors
honeybee,
brain
richest
in
lipid
terms
both
diversity
abundance.
In
this
study,
an
in-depth
LC-MS/MS-based
lipidomic
method
was
applied
systematically
characterize
compositions
worker
bees
with
three
stages:
newly
emerged
bee
(NEB),
nurse
(NB),
forager
(FB).
A
total
number
337
species
that
assigned
20
classes
were
analyzed.
association
lipidomes
labors
suggested
results
unsupervised
supervised
multivariate
pattern
recognition
analysis.
More
than
68%
identified
found
be
significantly
changed
at
least
one
comparison
between
NEB,
NB,
FB.
81
as
potential
labor-featured
molecules
VIP
>
1
p-adj
<
0.05.
lipids
FA(18:2),
FA(18:3),
FA(26:0),
PC(18:0_18:3),
PS(18:1_18:1),
SM(d38:1),
CoQ10,
CoQ9,
well
their
interactions
12
behavior-related
genes,
including
AmEST-6,
AmFABP,
AmE75,
AmDGAT2,
AmLSD1,
AmNPC1,
AmABCA1,
AmNMDAR1,
AmHTT,
AmNOS,
etc.,
revealed
further
IPA
These
findings
demonstrate
for
first
time
are
associated
stable
differences
labors,
which
help
understand
function
on
labor-dependent
honeybees.
Frontiers in Ethology,
Journal Year:
2024,
Volume and Issue:
3
Published: March 5, 2024
Since
Tinbergen’s
seminal
contribution
in
1963,
ethology
has
blossomed
as
a
multifaceted
research
field.
Sixty
years
later,
uncountable
articles
followed
the
four
questions
proposed
necessary
for
understanding
animal
behaviour,
and
they
culminated
segmentation
of
subareas
which
communicate
little
among
themselves.
Foraging
ants
is
one
example
where
this
division
happened,
despite
clear
need
to
integrate
results
obtained
from
different
approaches.
We
chose
subject
revise
literature,
relating
main
relevant
level
explanation
theoretical
framework.
Through
such
revision,
we
aim
foster
integration
approaches
bring
light
how
can
clarify
understand
foraging
sixty
after
initial
proposition.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: March 13, 2024
Ant-plant
symbioses
are
classic
examples
of
mutualism
in
which
ant
"bodyguards"
defend
myrmecophytic
plants
against
enemies
exchange
for
nest
sites
and
often
food.
We
used
RNA-Seq
to
profile
the
transcriptomes
Allomerus
octoarticulatus
workers,
aggressively
Amazonian
plant
Cordia
nodosa
herbivores,
but
varying
degrees.
Field
behavioral
assays
with
herbivores
Peruvian
Amazon
showed
striking
variation
among
colonies
relative
zeal
A.
workers
their
host
plant.
Highly
effective
ineffective
bodyguards
differed
gene
expression
profiles,
revealed
viral
infections
significantly
associated
bodyguarding
behavior.
Transcripts
from
eight
new
positive-sense
single-stranded
RNA
viruses
were
differentially
expressed
between
high-
or
low-quality
bodyguards.
Colonies
infected
by
distinct
viruses,
including
clustering
phylogenetically
known
cause
aggression
reduced
locomotion,
respectively,
bees.
Gene
expression,
immunity-related
genes,
also
broodcare
bodyguard
ants,
suggesting
is
a
worker
task.
Ant
colony
health
may
influence
cooperation
ant-plant
mutualisms.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: May 2, 2024
Microbiome
composition
impacts
many
host
aspects
including
health,
nutrition,
reproduction,
and
behavior.
This
warrants
the
recent
uptick
in
insect
microbiota
research
across
species
ecosystems.
Commensurate
with
this,
bacterial
microbiome
of
ant
Camponotus
floridanus
has
been
well
characterized
body
regions
maturation
levels.
However,
potential
effects
entomopathogens
on
gut
microbiome,
fungal
communities
therein,
are
yet
to
be
assessed.
Investigation
during
infection
could
provide
insight
into
entomopathogenic
manipulation
strategies
inform
effective
biopesticide
strategies.
Additionally,
mycobiome
remains
often
overlooked
despite
playing
a
vital
role
ecology
implications
for
health
outcomes.
To
improve
our
limited
understanding
infections
insects,
ants
particular,
we
two
different
micro-
mycobiota
C.
over
time;
Ophiocordyceps
camponoti-floridani
Beauveria
bassiana.
Specialist,
zombie-making
O.
fungi
hijack
behavior
three
weeks,
causing
them
find
an
elevated
position,
fix
themselves
place
their
mandibles.
summiting
is
adaptive
as
transports
fungus
conditions
that
favor
fruiting
development,
spore
production,
dispersal,
transmission.
In
contrast,
generalist
entomopathogen
B.
bassiana
infects
kills
within
few
days,
without
induction
obvious
fungus-adaptive
behaviors.
By
comparing
healthy
Beauveria-
Ophiocordyceps-infected
aimed
1)
describe
dynamics
infection,
2)
determine
if
distinctive
between
have
While
did
not
measurably
affect
micro-and
mycobiome,
did,
especially
mycobiome.
Moreover,
were
sampled
Ophiocordyceps-adaptive
had
significantly
compared
controls
those
before
after
took
place.
suggests
might
play
strategy
Ophiocordyceps.