Evolutionary and functional analysis of the DIR gene family in Moso bamboo: insights into rapid shoot growth and stress responses
Xueyun Xuan,
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Shiying Su,
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Jialu Chen
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et al.
Frontiers in Plant Science,
Journal Year:
2025,
Volume and Issue:
16
Published: Feb. 25, 2025
Dirigent
(DIR)
proteins
are
key
regulators
of
lignin
and
lignan
biosynthesis
play
critical
roles
in
plant
hormone
responses,
abiotic
stress
tolerance,
growth
development.
This
study
identified
characterized
47
PeDIR
genes
Moso
bamboo,
classifying
them
into
three
groups.
Phylogenetic
comparative
analyses
revealed
strong
evolutionary
conservation,
with
the
bamboo
being
most
closely
related
to
those
rice
maize.
DIR
within
each
subfamily
exhibited
high
conservation
motif
composition,
domain
structure,
3D
configuration.
Subcellular
localization
protein
interaction
studies
further
elucidated
gene
functions.
Specifically,
PeDIR02
primarily
localized
cell
membrane
was
shown
be
unable
form
homodimers
yeast
two-hybrid
(Y2H)
assays.
Transcriptome
expression
involvement
rapid
shoot
growth,
indicating
wall
modification.
qRT-PCR
data
also
demonstrated
responsiveness
these
hormones
stresses,
such
as
drought
salinity.
constructed
first
comprehensive
regulatory
network
between
transcription
factors
(TFs)
genes,
identifying
ERF,
DOF,
MYB
TFs
synergistic
expression.
Language: Английский
Comprehensive genome-wide analysis and functional characterization of the DIR gene family in Herpetospermum pedunculosum: insights from HpDIR16 and HpDIR17
Daihan Chen,
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Min Sun,
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Yixi Yang
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et al.
Plant Physiology and Biochemistry,
Journal Year:
2025,
Volume and Issue:
unknown, P. 110074 - 110074
Published: May 1, 2025
Language: Английский
A Dirigent Gene, ZmDIR11, Positively Regulates Drought Tolerance in Maize
Agronomy,
Journal Year:
2025,
Volume and Issue:
15(3), P. 604 - 604
Published: Feb. 28, 2025
The
DIR
gene
family,
which
encodes
Dirigent
proteins,
plays
a
crucial
role
in
plant
development
and
stress
responses.
However,
the
functions
mechanisms
of
this
family
maize
remained
underexplored.
This
study
identified
ZmDIR11,
member
protein
explored
its
drought
tolerance.
ZmDIR11
shared
conserved
regions
with
homologous
proteins
wheat,
rice,
Arabidopsis.
RT-qPCR
analysis
revealed
that
expression
is
upregulated
leaves
under
PEG
stress,
while
subcellular
localization
confirmed
presence
endoplasmic
reticulum.
Virus-induced
silencing
(VIGS)
EMS
mutagenesis
demonstrated
or
mutation
significantly
reduces
tolerance
seedlings,
indicating
positive
regulatory
role.
Silencing
led
to
decreased
growth
parameters
(plant
height,
root
length,
fresh
weight,
dry
chlorophyll
content)
alongside
reduced
antioxidant
capacity,
as
evidenced
by
increased
levels
MDA
ROS
activities
SOD,
CAT,
POD.
Furthermore,
impaired
synthesis
ABA
zeatin,
downregulating
key
genes
(ZmABA1,
ZmNCED3,
ZmSnRK2.6)
zeatin
(ZmIPT4,
ZmCKO5,
ZmCKO4b)
pathways.
Drought-responsive
(ZmRD20,
ZmRD22,
ZmDREB2A)
lignan
biosynthesis
(Zm4CL,
ZmC3H,
ZmCAD1)
are
also
downregulated
mutants.
In
conclusion,
enhances
regulating
synthesis,
metabolism.
provides
new
insights
into
offers
potential
genetic
resource
for
breeding
drought-resistant
varieties.
Language: Английский
GL5.2, a Quantitative Trait Locus for Rice Grain Shape, Encodes a RING-Type E3 Ubiquitin Ligase
Zhang Hui,
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De-Run Huang,
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Yi Shen
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et al.
Plants,
Journal Year:
2024,
Volume and Issue:
13(17), P. 2521 - 2521
Published: Sept. 8, 2024
Grain
weight
and
grain
shape
are
important
traits
that
determine
rice
yield
quality.
Mining
more
quantitative
trait
loci
(QTLs)
control
will
help
to
further
improve
the
molecular
regulatory
network
of
development
provide
gene
resources
for
high-yield
high-quality
varieties.
In
present
study,
a
QTL
length
(GL)
width
(GW),
Language: Английский