Baleen
whales
(Mysticeti)
are
a
clade
of
highly
adapted
carnivorous
marine
mammals
that
can
reach
extremely
large
body
sizes
and
feature
characteristic
keratinaceous
baleen
plates
used
for
obligate
filter
feeding.
From
conservation
perspective,
nearly
all
whale
species
were
hunted
extensively
over
roughly
100
years
lasting
time
period
depleted
many
the
respective
stocks
with
so
far
unknown
consequences
e.g.
their
molecular
viability.
an
evolutionary
lack
fossil
records
together
conflicting
patterns
resulted
in
still
unclear
debated
phylogeny
modern
whales,
particularly
rorquals
(Balaenopteridae).
In
this
dissertation,
I
will
demonstrate
application
genomes
to
tackle
these
open
questions
by
using
approaches
genomics.
Conservation
genomic
aspects
addressed
two
projects,
both
whole
genome
data
either
Icelandic
fin
(Balaenoptera
physalus)
population
or
multiple
blue
musculus)
populations
evaluate
impact
industrial
whaling
era
on
The
results
suggest
substantial
drop
effective
size
but
also
manifestation
genotypes
when
compared
populations.
Especially
rare
short
runs
homozygosity
(ROH),
usually
indicative
inbreeding,
frequent
outcrossing
while
analyzed
featured
long
ROH.
addition
analyses,
was
further
if
northern
hemisphere
diverged
into
different
subspecies.
Population
genetic
gene
flow
analyses
showed
clearly
separated
well
isolated
accordance
assumed
geographical
distance.
contrast,
genome-wide
divergence
between
low
other
cetacean
next
closely
related
sei
species.
Because
includes
morphologically
recognized
pygmy
subspecies,
proposal
made
equally
categorize
northern-hemisphere
as
Evolutionary
third
project,
constructing
right
(Caperea
marginata)
testing
its
potential
phylogenetics
cancer
research.
Phylogenomic
fragments
whole-genome
alignment
featuring
extant
allowed
revision
complex
relationships
quantifying
characterizing
amounts
conflicts
early
diverging
branches.
These
identify
phylogenetically
independent
pairs
maximum
differences
compare
rates
positive
selection
genomes.
evenly
distributed
frequencies
alternative
topologies
which
supports
representation
hard
polytomy
high
introgression
incomplete
lineage
sorting.
Within
set
available
data,
three
found
comparisons
potentially
genes.
conserved
patterns,
however,
more
convergent
evolution
resistance
like
previously
discussed
paleontology.
conclusion,
methods
genetics
comprehensive
estimation
about
viability
assessment
taxonomic
status
rather
underlines
importance
monitoring
because
show
varying
depletions.
Furthermore,
showcased
whale,
important
may
be
management
most
likely
contribute
overcome
under-classification
problem.
research
characterization
within
especially
understanding
evolution.
here
support
idea
gigantism
guide
search
responsible
Peto’s
paradox.
Peer Community Journal,
Journal Year:
2024,
Volume and Issue:
4
Published: Aug. 30, 2024
Identification
of
the
taxonomic
origin
bone
tools
is
an
important,
but
often
complicated,
component
studying
past
societies.
The
species
used
for
tool
production
provide
insight
into
what
were
exploited,
potentially
how,
and
purpose.
Additionally,
choice
may
have
important
implications
place
within
larger
toolkit.
However,
identification
unsuccessful
based
on
morphology.
Here
we
apply
three
palaeoproteomic
techniques,
ZooMS,
SPIN-like
data
analysis
a
targeted
database
search
to
narrow
down
unusually
large
Bronze
Age
from
Heiloo,
Netherlands,
North
Atlantic
right
whale
(Eubalaena
glacialis).
was
investigated
use-wear,
which
showed
that
it
likely
processing
plant
fibres.
assignment
as
adds
support
exploitation
whales
by
coastal
populations,
not
just
meat,
previously
suggested,
also
resource
production.
We
know
no
other
parallel
such
this
in
terms
size,
use,
hafting,
identity.
The Anatomical Record,
Journal Year:
2024,
Volume and Issue:
307(9), P. 3041 - 3070
Published: Jan. 31, 2024
The
tympanoperiotic
complex
of
a
blue
whale
Balaenoptera
musculus
is
described
and
compared
to
the
homologous
structures
in
other
extant
fossil
baleen
species.
periotic
tympanic
bulla
represent
informative
anatomical
regions
both
functional
phylogenetic
studies
for
this
reason
micro-CT
scan
bones
was
performed
order
better
characterize
their
external
aspect
reconstruct
inner
structures.
In
particular,
cochlea,
semicircular
canals
associated
portions
are
reconstructed
so
that
these
may
be
used
analyses.
We
observed
characterized
by
presence
strong
dorsal
protrusion
which
posteriorly
bordered
previously
undescribed
morphological
character
we
name
posterotransverse
fossa.
peculiar
shape
anterior
process
en
echelon
organization
posterior
foramina
pars
cochlearis
also
compared.
From
perspective,
confirmed
closely
related
fin
whale,
physalus,
but
it
suggested,
based
on
ear
bone
characters
only,
diverged
before
balaenopterid
species
phylogeny
Balaenopteridae.
This
placement
supports
series
observations
suggesting
an
early-diverging
member
Balaenoptera.
Our
results
help
decipher
evolutionary
origin
largest
living
animal,
allowing
new
more
detailed
analyses
record.
Humans
have
been
changing
landscapes
and
biodiversity
at
a
global
scale
tosupply
the
needs
of
an
exponentially
growing
population.
The
rapid
development
anddeployment
technology
enabled
humans
to
explore
natural
resources
in
anunprecedented
manner.
As
human
population
increased,
reductions
wildpopulations
followed.
How
long
can
exploited
populations
sustain
humans?
Willpopulations
that
recovered
from
substantial
reduction
thrive?
What
history
teachus
about
how
maintain
biodiversity?
At
same
time,
has
revolutionizedscience
many
ways.
A
good
example
is
genomics.
Now
we
are
able
obtain
completegenome
data
organisms
unprecedented
scales,
times,
costs.
hiddeninformation
coded
billions
DNA
nucleotides
excellent
means
access
past,understand
present,
project
future.
An
interesting
animal
group
toinvestigate
above
questions
baleen
whales.
Their
enigmatic
underwater
life,complex
evolutionary
histories,
drastic
past
during
commercialwhaling,
recent
recovery,
provide
unique
opportunity
empirically
assess
somecommonly
held
assumptions
genetics
theory
make
predictionsconcerning
genomic
legacy
contemporary
populations.This
thesis
explores
information
contained
complete
genomes
ofbaleen
whales,
largest
vertebrates
on
Earth.
Employing
cutting-edge
analyses
thegenome
era,
I
attempted
in-depth
investigation
long-term
recentevolutionary
This
offers
insight
into
some
whales'complex
phylogenetic
relationships,
genome-wide
glimpse
current
pastgenetic
diversity,
changes
mutations,
most
notably,
theimpact
exploitation
Gene,
Journal Year:
2024,
Volume and Issue:
929, P. 148822 - 148822
Published: Aug. 3, 2024
Marine
ecosystems
are
ideal
for
studying
evolutionary
adaptations
involved
in
lineage
diversification
due
to
few
physical
barriers
and
reduced
opportunities
strict
allopatry
compared
terrestrial
ecosystems.
Cetaceans
(whales,
dolphins,
porpoises)
a
diverse
group
of
mammals
that
successfully
adapted
various
habitats
within
the
aquatic
environment
around
50
million
years
ago.
While
overall
adaptive
transition
from
fully
species
is
relatively
well
understood,
radiation
modern
whales
still
unclear.
Here
high-quality
genomes
derived
previously
published
data
were
used
identify
genomic
regions
potentially
underpinned
baleen
(Balaenopteridae).
A
robust
molecular
phylogeny
was
reconstructed
based
on
10,159
single
copy
complete
genes
eight
mysticetes,
seven
odontocetes
two
cetacean
outgroups.
Analysis
positive
selection
across
3,150
revealed
balaenopterids
have
undergone
numerous
idiosyncratic
convergent
variations
may
explain
their
diversification.
Genes
associated
with
aging,
survival
homeostasis
enriched
all
species.
Additionally,
immune
system
disclosed
largest
species,
blue
fin
whales.
Such
can
be
ascribed
morphological
evolution,
allowing
them
attain
greater
length
increased
cell
number.
Further
evidence
presented
about
gene
might
contributed
extensive
anatomical
changes
shown
by
cetaceans,
including
adaptation
distinct
environments
diets.
This
study
contributes
our
understanding
basis
linked
radiation,
thereby
enhancing
evolution.
Baleen
whales
(Mysticeti)
are
a
clade
of
highly
adapted
carnivorous
marine
mammals
that
can
reach
extremely
large
body
sizes
and
feature
characteristic
keratinaceous
baleen
plates
used
for
obligate
filter
feeding.
From
conservation
perspective,
nearly
all
whale
species
were
hunted
extensively
over
roughly
100
years
lasting
time
period
depleted
many
the
respective
stocks
with
so
far
unknown
consequences
e.g.
their
molecular
viability.
an
evolutionary
lack
fossil
records
together
conflicting
patterns
resulted
in
still
unclear
debated
phylogeny
modern
whales,
particularly
rorquals
(Balaenopteridae).
In
this
dissertation,
I
will
demonstrate
application
genomes
to
tackle
these
open
questions
by
using
approaches
genomics.
Conservation
genomic
aspects
addressed
two
projects,
both
whole
genome
data
either
Icelandic
fin
(Balaenoptera
physalus)
population
or
multiple
blue
musculus)
populations
evaluate
impact
industrial
whaling
era
on
The
results
suggest
substantial
drop
effective
size
but
also
manifestation
genotypes
when
compared
populations.
Especially
rare
short
runs
homozygosity
(ROH),
usually
indicative
inbreeding,
frequent
outcrossing
while
analyzed
featured
long
ROH.
addition
analyses,
was
further
if
northern
hemisphere
diverged
into
different
subspecies.
Population
genetic
gene
flow
analyses
showed
clearly
separated
well
isolated
accordance
assumed
geographical
distance.
contrast,
genome-wide
divergence
between
low
other
cetacean
next
closely
related
sei
species.
Because
includes
morphologically
recognized
pygmy
subspecies,
proposal
made
equally
categorize
northern-hemisphere
as
Evolutionary
third
project,
constructing
right
(Caperea
marginata)
testing
its
potential
phylogenetics
cancer
research.
Phylogenomic
fragments
whole-genome
alignment
featuring
extant
allowed
revision
complex
relationships
quantifying
characterizing
amounts
conflicts
early
diverging
branches.
These
identify
phylogenetically
independent
pairs
maximum
differences
compare
rates
positive
selection
genomes.
evenly
distributed
frequencies
alternative
topologies
which
supports
representation
hard
polytomy
high
introgression
incomplete
lineage
sorting.
Within
set
available
data,
three
found
comparisons
potentially
genes.
conserved
patterns,
however,
more
convergent
evolution
resistance
like
previously
discussed
paleontology.
conclusion,
methods
genetics
comprehensive
estimation
about
viability
assessment
taxonomic
status
rather
underlines
importance
monitoring
because
show
varying
depletions.
Furthermore,
showcased
whale,
important
may
be
management
most
likely
contribute
overcome
under-classification
problem.
research
characterization
within
especially
understanding
evolution.
here
support
idea
gigantism
guide
search
responsible
Peto’s
paradox.