Trends in biotechnology: <em>Vibrio natriegens</em> as potential micro-factory for valorization of crustacean waste DOI Open Access
Thanh Hung Nguyen, Trần Thị Vân Anh,

Thuy-Hang Dam

et al.

ACADEMIA JOURNAL OF BIOLOGY, Journal Year: 2024, Volume and Issue: 46(4), P. 71 - 89

Published: Dec. 27, 2024

Vibrio natriegens has recently been identified as a promising host for the biotechnology industry thanks to its inherent qualities, which include fast growth rate, non-pathogenicity humans, and versatility in using substrates. These advantages have led potential use of V. biosynthesis several products. Basically, industrial scale requires fermentation or cultivation processes be conducted at high substrate biomass concentrations maximize final retrieved product. However, studies on cell density are limited. Besides, convert recalcitrant substrates such chitin derivatives into biological products not yet understood. This review summarizes up-to-date information physiological characteristics, metabolism, genome, genetic modification tools natriegens. Subsequentially, statistics analysis research trends related was presented. Finally, discussion role converting waste from seafood processing culturing feedstock achieve circular economy net zero emissions provided.

Language: Английский

Producing recombinant proteins in Vibrio natriegens DOI Creative Commons
Matthew M. Smith,

José Sánchez Hernández,

Simon Messing

et al.

Microbial Cell Factories, Journal Year: 2024, Volume and Issue: 23(1)

Published: July 24, 2024

The diversity of chemical and structural attributes proteins makes it inherently difficult to produce a wide range in single recombinant protein production system. nature the target themselves, along with cost, ease use, speed, are typically cited as major factors consider production. Despite variety alternative expression systems, most for research therapeutics produced limited number systems: Escherichia coli, yeast, insect cells, mammalian cell lines HEK293 CHO. Recent interest Vibrio natriegens new bacterial host is due part its short doubling time ≤ 10 min but also stems from promise compatibility techniques genetic systems developed E. coli. We successfully incorporated V. an additional system report improvements published protocols well that expand versatility While not all benefit natriegens, we several were or impossible show some cases, increased yield higher levels properly folded protein. Additionally, able adapt our enhanced isotope incorporation methods use natriegens. Taken together, these observations allowed biology, biochemistry, assay development, structure-based drug design and/or unaffordable

Language: Английский

Citations

5

Vibrio species as next-generation chassis for accelerated synthetic biology DOI

Changhwan Hong,

Yoojin Kim, Hyunjin Lee

et al.

Biotechnology and Bioprocess Engineering, Journal Year: 2024, Volume and Issue: 29(2), P. 241 - 253

Published: Feb. 19, 2024

Language: Английский

Citations

4

Advancements in metabolic engineering: unlocking the potential of key organic acids for sustainable industrial applications DOI Creative Commons
Tengfei Wang, Xue Han,

Hongling Liu

et al.

Frontiers in Bioengineering and Biotechnology, Journal Year: 2025, Volume and Issue: 13

Published: March 11, 2025

This review explores the advancements, application potential, and challenges of microbial metabolic engineering strategies for sustainable organic acid production. By integrating gene editing, pathway reconstruction, dynamic regulation, platforms have achieved enhanced biosynthesis key acids such as pyruvate, lactic acid, succinic acid. Strategies including by-product knockout, enzyme overexpression, improved CO 2 fixation contributed to higher production efficiency. Additionally, utilizing non-food biomass sources, lignocellulose, algal feedstocks, industrial waste, has reduced reliance on conventional carbon supporting sustainability goals. However, remain in substrate inhibition, purification complexity, flux imbalances. Addressing these requires omics-driven optimization, stress-resistant strain development, biorefinery integration. Future research should focus system-level design enhance cost-effectiveness sustainability, advancing bio-manufacturing acids.

Language: Английский

Citations

0

Low-biomass pyruvate production with engineered Vibrio natriegens is accompanied by parapyruvate formation DOI Creative Commons
Maurice Hädrich,

Clarissa Scheuchenegger,

Sören-Tobias Vital

et al.

Microbial Cell Factories, Journal Year: 2025, Volume and Issue: 24(1)

Published: March 28, 2025

Abstract Background Pyruvate is a precursor for various compounds in the chemical, drug, and food industries therefore an attractive target molecule microbial production processes. The fast-growing bacterium Vibrio natriegens excels with its specific substrate uptake rate as unconventional chassis industrial biotechnology. Here, we aim to exploit traits of V. pyruvate fermentations low biomass concentrations. Results We inactivated dehydrogenase complex Δ vnp12 , which harbors deletions prophage regions . resulting strain aceE was unable grow minimal medium glucose unless supplemented acetate. In shaking flasks, showed growth 1.16 ± 0.03 h − 1 produced 4.0 0.3 g Pyr L within 5 h. optimized parameters aerobic fermentation process applied constant maintenance feed 0.24 Ac resulted maximal concentration only 6.6 0.4 CDW yielded highly active resting cells (q S ) 3.5 0.2 Glc −1 41.0 1.8 volumetric productivity 4.1 Carbon balancing disclosed gap 30%, identified partly parapyruvate. Deletion ligK encoding HMG/CHA aldolase did not impact formation but plasmid-based overexpression negatively affected led 3-fold higher parapyruvate culture broth. Notably, also supernatants pyruvate-producing Corynebacterium glutamicum strain. Cell-free bioreactor experiments mimicking biological formation, pointing chemical reaction contributing synthesis. Conclusions engineered metabolically producing high at concentration. However, found that accompanied by well C. Parapyruvate seems be result conversion might supported biochemically reaction.

Language: Английский

Citations

0

β-nicotinamide mononucleotide production in Vibrio natriegens: a preliminary study DOI Creative Commons

Lan Tran,

Vu Chi Mai Tran, Huy Tuan Dat Pham

et al.

F1000Research, Journal Year: 2025, Volume and Issue: 14, P. 408 - 408

Published: April 7, 2025

Background Nicotinamide mononucleotide (NMN), is a promising nutraceutical attracting much attention for its pharmacological and anti-aging efficacies. However, NMN-containing commercial products are very high-priced due to the lack of efficient facile methods industrial-scale production. To date, various metabolic engineering strategies have been successfully applied produce NMN in Escherichia coli. Recently, Vibrio natriegens has become host bioindustry thanks rapid growth capabilities broad substrate utilization. This study aims evaluate biosynthesis capability V. natriegens. Methods Firstly, mutant strain (Δdns::araC-T7RNAP-KanR ΔpncC::FtnadE-SmR ΔnadR) was generated via multiplex genome editing by natural transformation (MuGENT). Nampt genes encoding nicotinamide phosphoribosyltransferase from Chitinophaga pinensis, Sphingopyxis sp. C-1, Haemophilus ducreyi, Vibrio phage KVP40 were codon-optimized cloned into pACYCDuet™-1 under control T7 promoter. The recombinant plasmids electroporated strain. expression NAMPTs evaluated SDS-PAGE analysis intracellular concentrations quantified HPLC. Results After two rounds MuGENT, V54-33 generated. demonstrated that all strongly expressed HPLC revealed highest concentration obtained with NAMPT pinensis (44.5 μM), followed Vibrio (23.3 μM). Conclusion feasibility natriegens.

Language: Английский

Citations

0

Small-scale fed-batch cultivations of Vibrio natriegens: overcoming challenges for early process development DOI Creative Commons
Clara Lüchtrath, Eva Forsten,

Romeos Polis

et al.

Bioprocess and Biosystems Engineering, Journal Year: 2025, Volume and Issue: unknown

Published: April 18, 2025

Abstract Vibrio natriegens is a fast-growing microbial workhorse with high potential for biotechnological applications. However, handling the bacterium in batch processes challenging due to its overflow metabolism and mixed acid formation under microaerobic conditions. For early process development, technologies enabling small-scale fed-batch cultivation of V. Vmax are needed. In this study, cultivations 96-well microtiter plates were successfully online-monitored first time µTOM device. Using oxygen transfer rate, scale up membrane-based shake flasks was performed. The efficiently minimized by choosing suitable feed rates, prevented. A glucose soft sensor using rate provided accurate estimates consumption throughout fermentation, eliminating need offline sampling. Analyzing impact inducer IPTG on recombinant production enzyme inulosucrase revealed concentration-dependent effects processes. contrast, operating mode resulted activity even without induction. Overall, an titer 80 U/mL achieved. conclusion, advantages supported have been demonstrated development Vmax.

Language: Английский

Citations

0

Techno-economic assessment of bio-based pyruvate production from rice straw: A commercial viability analysis DOI
Manish Pant,

Tanuja Pant

Biomass and Bioenergy, Journal Year: 2025, Volume and Issue: 199, P. 107913 - 107913

Published: April 21, 2025

Language: Английский

Citations

0

The new chassis in the flask: Advances in Vibrio natriegens biotechnology research DOI Creative Commons

Matthew Lima,

Charandatta Muddana,

Zhengyang Xiao

et al.

Biotechnology Advances, Journal Year: 2024, Volume and Issue: 77, P. 108464 - 108464

Published: Oct. 9, 2024

Biotechnology has been built on the foundation of a small handful well characterized and well-engineered organisms. Recent years have seen breakout performer gain attention as new entrant into bioengineering toolbox: Vibrio natriegens. This review covers recent research efforts making V. natriegens biotechnology platform, using large language model (LLM) knowledge graph to expedite literature survey process. Scientists made advancements in pertaining fundamental metabolic characteristics natriegens, development characterization synthetic biology tools, systems analysis modeling, bioproduction engineering, microbial ecology. Each these subcategories relevance future for applications. In this review, we cover offer context impact they may field, highlighting benefits drawbacks organism. From examining research, it appears that is precipice becoming platform bacterium biotechnology.

Language: Английский

Citations

3

Advances in Vibrio -related infection management: an integrated technology approach for aquaculture and human health DOI Creative Commons
Anshuman Mishra, Heui‐Soo Kim, Rajender Kumar

et al.

Critical Reviews in Biotechnology, Journal Year: 2024, Volume and Issue: 44(8), P. 1610 - 1637

Published: May 5, 2024

species pose significant threats worldwide, causing mortalities in aquaculture and infections humans. Global warming the emergence of worldwide strains

Language: Английский

Citations

1

Vibrio natriegens: Application of a Fast-Growing Halophilic Bacterium DOI
Maurice Hädrich, Clarissa Schulze, Josef Hoff

et al.

Advances in biochemical engineering, biotechnology, Journal Year: 2024, Volume and Issue: unknown

Published: Jan. 1, 2024

Language: Английский

Citations

1