A systematic review of epigenetic interplay in kidney diseases: Crosstalk between long noncoding RNAs and methylation, acetylation of chromatin and histone
Ruizhi Tan,
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Jian Jia,
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Tong Li
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et al.
Biomedicine & Pharmacotherapy,
Journal Year:
2024,
Volume and Issue:
176, P. 116922 - 116922
Published: June 13, 2024
The
intricate
crosstalk
between
long
noncoding
RNAs
(lncRNAs)
and
epigenetic
modifications
such
as
chromatin/histone
methylation
acetylation
offer
new
perspectives
on
the
pathogenesis
treatment
of
kidney
diseases.
lncRNAs,
a
class
transcripts
longer
than
200
nucleotides
with
no
protein-coding
potential,
are
now
recognized
key
regulatory
molecules
influencing
gene
expression
through
diverse
mechanisms.
They
modulate
by
recruiting
or
blocking
enzymes
responsible
for
adding
removing
methyl
acetyl
groups,
DNA,
N6-methyladenosine
(m6A)
histone
acetylation,
subsequently
altering
chromatin
structure
accessibility.
In
diseases
acute
injury
(AKI),
chronic
disease
(CKD),
diabetic
nephropathy
(DN),
glomerulonephritis
(GN),
renal
cell
carcinoma
(RCC),
aberrant
patterns
DNA/RNA/histone
have
been
associated
onset
progression,
revealing
complex
interplay
lncRNA
dynamics.
Recent
studies
highlighted
how
lncRNAs
can
impact
pathology
affecting
function
genes
involved
in
cycle
control,
fibrosis,
inflammatory
responses.
This
review
will
separately
address
roles
diseases,
particular
emphasis
elucidating
bidirectional
effects
underlying
mechanisms
conjunction
addition
to
potential
exacerbating
renoprotective
pathologies.
Understanding
reciprocal
relationships
not
only
shed
light
molecular
underpinnings
pathologies
but
also
present
avenues
therapeutic
interventions
biomarker
development,
advancing
precision
medicine
nephrology.
Language: Английский
WTAP and METTL14 regulate the m6A modification of DKK3 in renal tubular epithelial cells of diabetic nephropathy
Kang Fu,
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Chenyang Jing,
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Jin‐Song Shi
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et al.
Biochemical and Biophysical Research Communications,
Journal Year:
2024,
Volume and Issue:
738, P. 150524 - 150524
Published: Aug. 9, 2024
Language: Английский
The inhibition of ZC3H13 attenuates G2/M arrest and apoptosis by alleviating NABP1 m6A modification in cisplatin-induced acute kidney injury
Qinghao Sheng,
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Qun Yu,
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Shangwei Lu
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et al.
Cellular and Molecular Life Sciences,
Journal Year:
2025,
Volume and Issue:
82(1)
Published: Feb. 22, 2025
Acute
kidney
injury
(AKI)
is
a
clinical
syndrome
caused
by
various
etiologies
and
causes
rapid
decline
in
renal
function
short
period
of
time.
The
most
common
internal
modification
mRNAs
the
N6-methyladenosine
(m6A)
modification,
which
important
for
controlling
gene
expressions.
However,
role
m6A
AKI
largely
unknown.
Here,
we
characterized
zinc
finger
CCCH-type
containing
13
(ZC3H13),
type
methyltransferases,
cisplatin-induced
mouse
model
cisplatin-treated
human
proximal
tubular
epithelial
cell
line
(HK2
cells).
ZC3H13
knockdown
attenuated
G2/M
cycle
arrest
apoptosis
HK2
cells.
In
ZC3H13-overexpressed
cells,
opposite
was
true.
presence
cisplatin,
mice
with
AAV9-mediated
silencing
exhibited
milder
arrest,
apoptosis,
injury.
addition,
identified
nucleic
acid
binding
protein
1
(NABP1)
as
target
ZC3H13,
verified
knocking
down
overexpressing
Moreover,
confirmed
that
ZC3H13-mediated
stabilized
NABP1
mRNA
discriminated
insulin-like
growth
factor
2
(IGF2BP1).
conclusion,
promoted
enhanced
its
stability
through
an
IGF2BP1-dependent
mechanism.
inhibition
alleviated
affecting
expression
NABP1.
These
results
show
ZC3H13/NABP1
axis
promising
treatment
target.
Language: Английский
RNA Modification in Metabolism
Yadi Liu,
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Zhongyan Sun,
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Dingkun Gui
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et al.
MedComm,
Journal Year:
2025,
Volume and Issue:
6(3)
Published: March 1, 2025
ABSTRACT
Epigenetic
regulation
in
disease
development
has
been
witnessed
within
this
decade.
RNA
methylation
is
the
predominant
form
of
epigenetic
regulation,
and
most
prevalent
modification
N6‐methyladenosine
(m
6
A).
Recently,
emerged
as
a
potential
target
for
treatment.
posttranscriptional
gene
expression
that
involved
both
physiological
pathological
processes.
Evidence
suggests
m
A
significantly
affects
metabolism,
its
abnormal
changes
have
observed
variety
diseases.
Metabolic
diseases
are
series
caused
by
metabolic
processes
body,
common
include
diabetes
mellitus,
obesity,
nonalcoholic
fatty
liver
disease,
etc.;
although
pathogenesis
these
differs
from
each
other
to
current
understanding,
recent
studies
suggested
pivotal
role
modulating
diseases,
A‐based
drug
on
agenda.
This
paper
reviewed
understanding
hoping
provide
systematic
information
those
area.
Language: Английский
m6A-mediated regulation of ECA39 promotes renal fibrosis in chronic kidney disease by enhancing glycolysis and epithelial-mesenchymal transition
Ziyuan Tong,
No information about this author
Hainan Zhao,
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Chen Cui
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et al.
Biochimica et Biophysica Acta (BBA) - Molecular Cell Research,
Journal Year:
2025,
Volume and Issue:
1872(6), P. 119981 - 119981
Published: May 1, 2025
Language: Английский
METTL3 promotes podocyte pyroptosis in diabetic nephropathy through N 6 -methyladenosine modification of TRIM29 mRNA
Renal Failure,
Journal Year:
2025,
Volume and Issue:
47(1)
Published: May 5, 2025
Multiple
studies
have
revealed
the
critical
roles
of
epigenetic
modifications
in
development
diabetic
nephropathy
(DN).
Methyltransferase-like
3
(METTL3)-mediated
N6-methyladenosine
(m6A)
RNA
modification
podocytes
represents
a
new
disease
mechanism
DN.
The
tripartite
motif-containing
(TRIM)
family
member
TRIM29
was
reported
to
promote
podocyte
pyroptosis
by
activating
nuclear
factor-κB/NLR
pyrin
domain
containing
(NLRP3)
inflammasome
pathway.
However,
whether
METTL3-mediated
m6A
mRNA
is
involved
injury
remain
unknown.
Here,
we
found
that
METTL3
upregulated
content
from
kidney
tissues
mice
with
streptozotocin-induced
DN
and
hyperglycemia-induced
MPC-5
murine
podocytes.
expression
high
glucose-treated
cells
resulted
elevated
release
interleukin
(IL)-1β,
IL-18,
lactate
dehydrogenase
pyroptosis-associated
molecules.
Mechanistically,
directly
target
for
activate
transcription.
Moreover,
reader
YT521-B
homology
(YTH)
YTHDF1
recruited
maintain
stability
mRNA,
which
contributed
significantly
increased
pyroptosis.
Furthermore,
potent
METTL3-specific
inhibitor
STM2457
prominently
alleviated
through
attenuating
activation
NLRP3
inflammasome/pyroptosis
pathway
mouse
model.
Our
results
suggest
plays
role
provides
insight
METTL3-
pyroptosis-targeted
strategies
treat
other
diseases.
Language: Английский
Molecular mechanism of ALKBH5‐mediated m6A demethylation regulating lipopolysaccharide‐induced epithelial–mesenchymal transition in sepsis‐induced acute kidney injury
Haihong Zhao,
No information about this author
Chun‐Ling Chen,
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Fen‐Fang Chen
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et al.
The Kaohsiung Journal of Medical Sciences,
Journal Year:
2024,
Volume and Issue:
40(11), P. 985 - 995
Published: Sept. 17, 2024
Abstract
This
study
explored
the
mechanism
by
which
m6A
demethylase
ALKBH5
mediates
epithelial–mesenchymal
transition
(EMT)
in
sepsis‐associated
acute
kidney
injury
(SA‐AKI)
and
AKI‐chronic
disease
(CKD)
transition.
HK‐2
cells
were
stimulated
with
lipopolysaccharide
(LPS)
to
establish
an
vitro
model
of
SA‐AKI.
expression
was
reduced
through
transfection
si‐ALKBH5.
Cell
viability,
apoptosis,
migration
detected
CCK‐8
assay,
TUNEL
staining,
Transwell.
The
levels
TNF‐α,
IL‐1β,
IL‐6
measured
enzyme‐linked
immunosorbent
assay.
Quantitative
real‐time
polymerase
chain
reaction
or
Western
blotting
performed
determine
expressions
ALKBH5,
miR‐205‐5p,
DDX5,
E‐cadherin,
α‐SMA.
level
quantitatively
analyzed.
pri‐miR‐205
bound
DGCR8
m6A‐modified
after
intervention
RNA
immunoprecipitation.
A
dual‐luciferase
assay
confirmed
binding
between
miR‐205‐5p
DDX5.
highly
expressed
LPS‐induced
cells.
Inhibition
increased
cell
repressed
EMT.
modification
level,
thereby
promoting
increase
eventually
targeting
DDX5
expression.
Low
overexpression
partially
abolished
inhibitory
effect
silencing
on
In
conclusion,
represses
removing
upregulate
expression,
EMT
AKI‐CKD
Language: Английский
Heterogeneous nuclear ribonucleoprotein F deficiency in mouse podocyte promotes podocytopathy mediated by methyltransferase-like 14 nuclear translocation resulting in Sirtuin 1 gene inhibition
Min-Chun Liao,
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Chao‐Sheng Lo,
No information about this author
Yuchao Pang
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et al.
Translational research,
Journal Year:
2024,
Volume and Issue:
267, P. 1 - 9
Published: Jan. 7, 2024
Language: Английский
The effect of METTL3 on MDM2 impairs cell cycle homeostasis in podocytes during diabetic kidney disease
Han Wu,
No information about this author
Ziyang Yu,
No information about this author
Yi Yang
No information about this author
et al.
Research Square (Research Square),
Journal Year:
2024,
Volume and Issue:
unknown
Published: April 17, 2024
Abstract
N6-Methyladenosine
(m6A)
methylation
is
involved
in
various
pathological
processes.
Our
previous
study
found
abnormal
expression
of
the
methyltransferases
enzyme
METTL3
aging
kidney
tissues,
resulting
renal
fibrosis
and
aging.
In
this
study,
we
aim
to
elucidate
its
regulatory
mechanisms
diabetic
disease
(DKD)
by
establishing
a
conditional
knockout
model.
We
observed
elevated
m6A
levels
mice
with
type
I
diabetes
cultured
mouse
podocytes
exposed
advanced
glycation
end-products
(AGEs),
which
could
be
attributed
increased
expression.
Podocyte-specific
knockdown
significantly
mitigated
podocyte
injury
streptozotocin
(STZ)-induced
mice,
leading
reduced
urine
albuminuria
pathology.
Mechanistically,
induced
modification
MDM2,
triggering
subsequent
degradation
an
IGF2BP2
dependent
manner.
Consequently,
regulation
induces
MDM2
expression,
activates
Notch
signaling
pathway,
cell
cycle
re-entry
under
conditions,
releases
inflammatory
factors,
dedifferentiation
podocytes.
Thus,
METTL3-mediated
aberrant
plays
pivotal
role
conditions.
Targeting
via
potentially
effective
strategy
for
DKD
treatment.
Language: Английский
Methyltransferase-like 3 represents a prospective target for the diagnosis and treatment of kidney diseases
Human Genomics,
Journal Year:
2024,
Volume and Issue:
18(1)
Published: Nov. 14, 2024
Kidney
disease
is
marked
by
complex
pathological
mechanisms
and
significant
therapeutic
hurdles,
resulting
in
high
morbidity
mortality
rates
globally.
A
deeper
understanding
of
the
fundamental
processes
involved
can
aid
identifying
novel
targets
improving
treatment
efficacy.
Current
comprehensive
data
analyses
indicate
involvement
methyltransferase-like
3
(METTL3)
its
role
RNA
N6-methyladenosine
methylation
various
renal
pathologies,
including
acute
kidney
injury,
fibrosis,
chronic
disease.
However,
there
a
paucity
thorough
reviews
that
clarify
functional
METTL3
evaluate
importance
enhancing
outcomes.
This
review
seeks
to
systematically
examine
roles,
mechanisms,
potential
clinical
applications
diseases.
The
findings
presented
suggest
implicated
etiology
exacerbation
disorders,
affecting
their
onset,
progression,
malignancy,
responsiveness
chemotherapeutic
agents
through
regulation
specific
genetic
pathways.
In
conclusion,
this
underscores
detrimental
correlation
between
diseases,
highlighting
promise
targeting
METTL3.
Additionally,
it
offers
critical
insights
for
researchers
concerning
diagnosis,
prognosis,
strategies
conditions.
Language: Английский