The comparative genomic analysis provides insight into the divergent inhibitory activity metabolites in pathogen-driven three Pseudomonas palleroniana strains against primary pathogens of Pseudostellaria heterophylla
Chunfeng Huang,
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Xiaoai Wang,
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Yanping Gao
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et al.
BMC Genomics,
Journal Year:
2025,
Volume and Issue:
26(1)
Published: April 2, 2025
Abstract
Pseudostellaria
heterophylla
(Miq.)
Pax
ex
et
Hoffm.
is
a
member
of
the
Caryophyllaceae
family,
in
which
dried
tuberous
root
well-known
traditional
Chinese
medicine
(TCM)
and
widespread
food
ingredient
Asia.
In
recent
years,
large-scale
cultivation
P.
has
led
to
frequent
infectious
diseases
caused
by
multiple
pathogens.
However,
efficient
safe
approaches
for
preventing
managing
have
become
urgent
this
high-quality
industrial
development.
Herein,
culturable
microbiome
diseased
rhizosphere
soil
was
constructed,
broad-spectrum
antifungal
activity
Pseudomonas
screened.
Three
palleroniana
strains,
B-BH16-1,
B-JK4-1,
HP-YBB-1B,
were
isolated
identified
with
vigorous
confrontation
method.
We
employed
PacBio
RS
II
single-molecule
real-time
(SMRT)
sequencing
Illumina
methods
obtain
genome
these
three
isolates.
Phylogenetic,
synteny,
ANI
analysis
showed
that
lineage
between
strain
B-JK4-1
B-BH16-1
or
HY-YBB-1B
closer
than
HP-YBB-1B.
The
comparative
strains
HP-YBB-1B
marked
differences
secondary
metabolite
biosynthesis
genes
among
strains.
Strain
HP-YBB-1
produced
tolaasin
I/tolaasin
F
(23
genes),
sessilin
A
(37
putisolvin
(39
respectively.
CAZyme
126,
129,
127
CAZymes
genomes,
auxiliary
activities
(AA),
carbohydrate
esterases
(CE),
glycosyl
transferases
(GT)
categories
different
These
results
provide
new
insights
into
divergent
metabolites
pathogen-driven
against
primary
pathogens
.
Language: Английский
Isolation and Characterization of Pseudomonas sp. HX1, Streptomyces luteogriseus HR40, and Streptomyces flavofungini HR77 as Promising Biocontrol Agents Against Verticillium Wilt in Hops Affected by Verticillium nonalfalfae
Horticulturae,
Journal Year:
2025,
Volume and Issue:
11(5), P. 459 - 459
Published: April 25, 2025
Verticillium
spp.
are
soil-borne
fungal
pathogens
capable
of
infecting
over
400
plant
species
via
their
root
systems,
with
each
demonstrating
a
distinct
host
range.
The
primary
nonalfalfae
is
the
hop
(Humulus
lupulus),
which
becomes
affected
by
wilt
and,
in
severe
cases,
dieback.
A
dual
screening
approach
was
employed
to
isolate
Streptomycetes
as
potential
biocontrol
agents
from
systems
alongside
other
bacterial
xylem.
Three
Pseudomonas
strains
xylem
and
three
Streptomyces
roots
were
selected
based
on
vitro
antifungal
activity
against
dahliae
and/or
V.
nonalfalfae.
Their
for
controlling
further
assessed
through
planta
assays
conducted
under
greenhouse
conditions.
results
demonstrated
that
sp.
HX1,
luteogriseus
HR40,
flavofungini
HR77
significantly
reduced
disease
severity
index
32.56%
compared
artificially
infected
control
plants.
In
contrast,
commercial
product
Serenade®
ASO,
containing
Bacillus
amyloliquefaciens
QST
713,
achieved
reduction
13.96%.
These
findings
underscore
promising
candidates
biological
hops
Language: Английский