Metagenomic profiling of rhizosphere microbiota: Unraveling the plant-soil dynamics
Physiological and Molecular Plant Pathology,
Journal Year:
2024,
Volume and Issue:
133, P. 102381 - 102381
Published: Aug. 20, 2024
Language: Английский
Microbial Diversity and Heavy Metal Resistome in Slag-Contaminated Soils from an Abandoned Smelter in Chihuahua, Mexico
Soil Systems,
Journal Year:
2025,
Volume and Issue:
9(2), P. 30 - 30
Published: April 1, 2025
Heavy
metal(loid)
(HM)
contamination
in
soils
from
smelting
activities
poses
significant
environmental
and
public
health
risks,
as
well
disruptions
microbial
community
dynamics
HM
resistance
gene
profiles.
This
study
investigates
the
diversity,
resistome,
physicochemical
properties
of
abandoned
Avalos
smelter
Chihuahua,
Mexico.
Through
soil
analyses,
we
identified
elevated
concentrations
certain
HMs,
which
pose
serious
hazards.
The
metagenomic
analysis
community,
composed
bacteria,
archaea,
fungi,
was
dominated
by
genera
such
Streptomyces,
Bradyrhizobium,
Halobaculum,
Nitrosocosmicus,
Fusarium,
Aspergillus
rhizospheric
soil.
Furthermore,
a
diverse
array
metal
genes
(MRGs)
were
detected,
associated
with
copper,
arsenic,
iron,
lead,
cadmium,
zinc,
other
HMs.
Additionally,
metagenome-assembled
genomes
(MAGs)
revealed
presence
functional
linked
to
resistance,
providing
deeper
insights
into
ecological
roles
metabolic
capabilities
taxa.
These
findings
highlight
impact
smelting-derived
on
diversity
potential,
offering
valuable
for
development
bioremediation
strategies
HM-contaminated
environments.
Language: Английский
Rhizosphere Soil Microbial Characteristics and Enzyme Activities under <i>Cajanus</i> <i>cajan</i> and <i>Milletia</i> <i>laurentii</i> Grown in Scientific Center of Brazzaville, Republic of the Congo
Irene Marie Cécile Mboukou-Kimbatsa,
No information about this author
Angélique Esperance Lembella Boumba,
No information about this author
Alvychelle Benith Banga
No information about this author
et al.
Open Journal of Applied Sciences,
Journal Year:
2025,
Volume and Issue:
15(01), P. 220 - 238
Published: Jan. 1, 2025
Language: Английский
Pseudomonas syringae exacerbates apple replant disease caused by Fusarium
Microbiological Research,
Journal Year:
2025,
Volume and Issue:
296, P. 128124 - 128124
Published: Feb. 28, 2025
Language: Английский
Metagenomics and plant-microbe symbioses: Microbial community dynamics, functional roles in carbon sequestration, nitrogen transformation, sulfur and phosphorus mobilization for sustainable soil health
Biotechnology Advances,
Journal Year:
2025,
Volume and Issue:
82, P. 108580 - 108580
Published: April 15, 2025
Language: Английский
Synergistic changes in bacterial community composition, function, and soil characteristics of tomato rhizosphere soil under long-term monoculture conditions
Rhizosphere,
Journal Year:
2024,
Volume and Issue:
31, P. 100950 - 100950
Published: Aug. 15, 2024
Language: Английский
Whole Genome Analysis of Streptomyces spp. Strains Isolated from the Rhizosphere of Vitis vinifera L. Reveals Their Role in Nitrogen and Phosphorus Metabolism
Nitrogen,
Journal Year:
2024,
Volume and Issue:
5(2), P. 301 - 314
Published: April 16, 2024
The
rhizospheric
microorganisms
of
agricultural
crops
play
a
crucial
role
in
plant
growth
and
nutrient
cycling.
In
this
study,
we
isolated
two
Streptomyces
strains,
sp.
LM32
LM65,
from
the
rhizosphere
Vitis
vinifera
L.
We
then
conducted
genomic
analysis
by
assembling,
annotating,
inferring
phylogenomic
information
whole
genome
sequences.
strain
had
size
8.1
Mb
GC
content
72.14%,
while
LM65
7.3
71%.
Through
ANI
results,
as
well
phylogenomic,
pan-,
core-genome
analysis,
found
that
was
closely
related
to
species
S.
coelicoflavus,
achromogenes
subsp.
achromogenes.
annotated
functional
categories
genes
encoded
both
which
revealed
involved
nitrogen
phosphorus
metabolism.
This
suggests
these
strains
have
potential
enhance
availability
soil,
promoting
sustainability.
Additionally,
identified
gene
clusters
associated
with
nitrate
nitrite
ammonification,
nitrosative
stress,
allantoin
utilization,
ammonia
assimilation,
denitrifying
reductase
clusters,
high-affinity
phosphate
transporter
control
PHO
regulon,
polyphosphate,
These
findings
highlight
ecological
roles
sustainable
agriculture,
particularly
grapevine
other
crop
systems.
Language: Английский
Metagenomics approaches in unveiling the dynamics of Plant Growth-Promoting Microorganisms (PGPM) vis-à-vis Phytophthora sp. suppression in various crop ecological systems
N SIVAPRAKASAM,
No information about this author
V. Sendhilvel,
No information about this author
G. Karthikeyan
No information about this author
et al.
Research in Microbiology,
Journal Year:
2024,
Volume and Issue:
175(7), P. 104217 - 104217
Published: June 9, 2024
Language: Английский
Metagenomic Analysis for Unveiling Agricultural Microbiome
Agronomy,
Journal Year:
2024,
Volume and Issue:
14(5), P. 981 - 981
Published: May 7, 2024
Microbial
communities
play
crucial
roles
in
sustaining
agricultural
ecosystems,
influencing
both
crop
health
and
productivity
[...]
Language: Английский
Mechanisms and Use of Plant Growth-Promoting Bacteria to Improve Seed Germination in Adverse Environments
Gipumi Torres-Abe,
No information about this author
Karina Alejandra Balderas-Ruíz,
No information about this author
G. Solís
No information about this author
et al.
IntechOpen eBooks,
Journal Year:
2024,
Volume and Issue:
unknown
Published: Nov. 5, 2024
Seed
dormancy
and
germination
are
highly
regulated
processes
under
the
control
of
various
factors,
among
which
stand
out
internal
balance
abscisic
acid
(ABA)/gibberellin
(GA)
environmental
conditions
that
impact
this
ratio.
Germination
determines
when
plants
enter
to
natural
or
agricultural
ecosystems.
It
represents
basis
production,
several
strategies
have
been
implemented
improve
it.
Plant
Growth
Promoting
Rhizobacteria
(PGPR)
ubiquitous
soil
microorganisms
favorably
plant
performance
through
pathogen
control,
nutrient
uptake,
tolerance
stress
conditions,
even
production
growth
regulators,
both
seed
subsequent
development.
Seeds
germinate
as
soon
they
embedded
sown,
so
most
studies
focused
on
mechanisms
depend
themselves,
it
is
evident
a
better
knowledge
plant-microorganism
interactions
could
be
useful
achieve
sustainable
ecologically
friendly
agriculture.
Here,
after
describing
endogenous
controlling
dormancy,
we
will
update
information
about
potential
PGPR
germination,
give
general
overview
their
use
in
agriculture
systems
guarantee
food
security
years
come.
Language: Английский