Editorial: The Application of Proteogenomics to Urine Analysis for the Identification of Novel Biomarkers of Prostate Cancer: An Exploratory Study DOI Open Access
Yaser Gamallat, Tarek A. Bismar

Cancers, Journal Year: 2023, Volume and Issue: 15(16), P. 4143 - 4143

Published: Aug. 17, 2023

In this editorial context, we aim to leverage the potential of proteogenomics, which integrates genomic and proteomic data, discover novel biomarkers that can aid in diagnosis management prostate cancer. We highlight importance proteogenomics for understanding functional consequences somatic mutations cancer demonstrating how proteogenomic analysis provide insights into effects genetic alterations on landscape identify therapeutic targets. This article also emphasizes urine detection Overall, our paper provides general application identification

Language: Английский

Capillary Electrophoresis: A Three-Year Literature Review DOI
Yueyang Li, Siyu Miao, Jiahua Tan

et al.

Analytical Chemistry, Journal Year: 2024, Volume and Issue: 96(20), P. 7799 - 7816

Published: April 10, 2024

ADVERTISEMENT RETURN TO ISSUEPREVReviewNEXTCapillary Electrophoresis: A Three-Year Literature ReviewYueyang LiYueyang LiDepartment of Chemistry, University British Columbia, Vancouver, Columbia V6T 1Z1, CanadaMore by Yueyang LiView Biography, Siyu MiaoSiyu MiaoDepartment MiaoView Jiahua TanJiahua TanDepartment TanView Qi Zhang*Qi ZhangSchool Pharmacy, Jiangsu University, Zhenjiang, 212013, P. R. China*Email: [email protected]More ZhangView Biographyhttps://orcid.org/0000-0001-9259-486X, and David Da Yong Chen*David ChenDepartment Canada*Email: ChenView Biographyhttps://orcid.org/0000-0002-3669-6041Cite this: Anal. Chem. 2024, 96, 20, 7799–7816Publication Date (Web):April 10, 2024Publication History Published online10 April 2024Published inissue 21 May 2024https://pubs.acs.org/doi/10.1021/acs.analchem.4c00857https://doi.org/10.1021/acs.analchem.4c00857review-articleACS PublicationsCopyright © 2024 American Chemical SocietyRequest reuse permissionsArticle Views935Altmetric-Citations-LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum full text article downloads since November 2008 (both PDF HTML) across all institutions individuals. These metrics regularly updated to reflect usage leading up last few days.Citations number other articles citing this article, calculated Crossref daily. Find more information about citation counts.The Altmetric Attention Score is a quantitative measure attention that research has received online. Clicking on donut icon will load page at altmetric.com with additional details score social media presence for given article. how calculated. Share Add toView InAdd Full Text ReferenceAdd Description ExportRISCitationCitation abstractCitation referencesMore Options onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose SUBJECTS:Extraction,Genetics,Interfaces,Metabolism,Peptides proteins Get e-Alerts

Language: Английский

Citations

16

Prediction of Clinically Significant Prostate Cancer by a Specific Collagen-related Transcriptome, Proteome, and Urinome Signature DOI Creative Commons
Isabel Heidegger,

Maria Frantzi,

Stefan Salcher

et al.

European Urology Oncology, Journal Year: 2024, Volume and Issue: unknown

Published: June 1, 2024

Language: Английский

Citations

9

The Molecular Biology of Prostate Cancer Stem Cells: From the Past to the Future DOI Open Access
Yong Zhou, Tian Li, Man Jia

et al.

International Journal of Molecular Sciences, Journal Year: 2023, Volume and Issue: 24(8), P. 7482 - 7482

Published: April 19, 2023

Prostate cancer (PCa) continues to rank as the second leading cause of cancer-related mortality in western countries, despite golden treatment using androgen deprivation therapy (ADT) or anti-androgen therapy. With decades research, scientists have gradually realized that existence prostate stem cells (PCSCs) successfully explains tumor recurrence, metastasis and therapeutic failure PCa. Theoretically, eradication this small population may improve efficacy current approaches prolong PCa survival. However, several characteristics PCSCs make their diminishment extremely challenging: inherent resistance chemotherapy treatment, over-activation survival pathway, adaptation micro-environments, escape from immune attack being easier metastasize. For end, a better understanding PCSC biology at molecular level will definitely inspire us develop targeted approaches. In review, we comprehensively summarize signaling pathways responsible for homeostatic regulation discuss how eliminate these fractional clinical practice. Overall, study deeply pinpoints provides some research perspectives.

Language: Английский

Citations

12

Highly Sensitive Detection of Engrailed-2 Protein Biomarker in Urine for Using Solution-Gated Graphene Transistor Diagnosis of Prostate Cancer DOI
Junqi Dong, Huan Yang, Song Peng

et al.

ACS Sensors, Journal Year: 2025, Volume and Issue: unknown

Published: March 4, 2025

Engrailed-2 (EN2) protein, a transcription factor in the homologous domain expressed prostate cancer (PCa) cells and secreted into urine, is considered promising biomarker for noninvasive detection of PCa. EN2 protein urine samples can be obtained by means, but low concentration poses great challenge PCa biomarker. Herein, we develop solution-gated graphene transistor (SGGT) biosensor to detect diagnosis. The aptamer probes are immobilized gold gate electrode through Au-S bonds. effect configurations on biosensor's responses also investigated. It found that SGGT with long-chain stem-like loop structure exhibits optimal performance. limit biosensors reach 0.1 fg/mL, rapid response time 19 min achieved. high specificity protein. More importantly, testing clinical indicates our sensor distinguish patients from non-PCa subjects. Compared traditional hospital prostate-specific antigen tests, better accuracy diagnosis

Language: Английский

Citations

0

Uncovering New Biomarkers for Prostate Cancer Through Proteomic and Network Analysis DOI Creative Commons
Rossana Rossi, Elena Monica Borroni, Ishak Yusuf

et al.

Biology, Journal Year: 2025, Volume and Issue: 14(3), P. 256 - 256

Published: March 4, 2025

Background: Prostate cancer (PCa), is the second most prevalent solid tumor among men worldwide (7.3%), and leading non-skin in USA where it represents 14.9% of all new cases diagnosed 2024. This multifactorial disease exhibits substantial variation incidence mortality across different ethnic groups geographic regions. Although prostate-specific antigen (PSA) remains widely used as a biomarker for PCa, its limitations reduce effectiveness accurate detection. Consequently, finding molecules that can either complement PSA other biomarkers major goal PCa research. Methods: Urine samples were collected from healthy donors (n = 5) patients with low- high-risk (4 7 subjects, respectively) analyzed using proteomic data-derived systems biology approaches. The promising proteins further investigated by means Cancer Genome Atlas (TCGA) database to assess their associations clinical histopathological characteristics larger silico patient population. Results: By evaluating variations urinary proteome mirror changes occurring prostate tissue, components coagulation cascades glutathione metabolism emerged hallmarks patients, respectively. Moreover, our integrated approach highlighted potential biomarkers, including CPM, KRT8, ITIH2, RCN1. Conclusions: good overlap results what already reported literature supports findings perspective improving knowledge on PCa. Furthermore, they increase panel could enhance management. Of course, investigations cohorts are required.

Language: Английский

Citations

0

The Impact of Urine Biomarkers for Prostate Cancer detection – A Systematic State of the Art Review DOI

Stefan Plas,

Felix Melchior,

Gerhard P. Aigner

et al.

Critical Reviews in Oncology/Hematology, Journal Year: 2025, Volume and Issue: unknown, P. 104699 - 104699

Published: March 1, 2025

Language: Английский

Citations

0

Pathophysiology and potential treatment modalities in women with recurrent urinary tract infection DOI Creative Commons
Wei Liao,

Yuan‐Hong Jiang,

Jia‐Fong Jhang

et al.

Tzu Chi Medical Journal, Journal Year: 2025, Volume and Issue: 37(2), P. 117 - 124

Published: April 1, 2025

Urinary tract infection (UTI) of the urinary bladder is a common bacterial that predominantly affects women, with many experiencing recurrent episodes. Recurrent UTIs (rUTIs) are associated significant physical, psychological, and social difficulties. Further, they closely related to lower dysfunction (LUTD). LUTD function structure, thereby contributing urgency, frequency, incontinence, which, in turn, increases risk infections due impaired urothelial defense mechanisms. The current study explored pathophysiology women rUTIs. Potential treatments for rUTIs include long-term prophylactic antibiotics, probiotics, D-mannose, vaccines, small molecule inhibitors, stem cell therapy. Moreover, it evaluated use platelet-rich plasma (PRP) therapy as treatment modality LUTD. PRP has regenerative anti-inflammatory properties. Hence, can be promising option enhancing barrier integrity reducing recurrence. Repeated intravesical injections effective improving symptoms decreasing UTI recurrences by proliferative ability urothelium patients this review examined potential predictors successful outcomes such cytokine biomarker levels, which provided insights into patient selection individualized strategies. Identifying predictive biomarkers responsiveness essential optimizing improve clinical quality life rUTIs, future research should focus on refining PRP, exploring combination therapies, validating biomarkers.

Language: Английский

Citations

0

Prediction of Prostate Cancer Biochemical Recurrence After Radical Prostatectomy by Collagen Models Using Multiomic Profiles DOI Creative Commons

Maria Frantzi,

Piotr Tymoszuk, Stefan Salcher

et al.

European Urology Oncology, Journal Year: 2025, Volume and Issue: unknown

Published: May 1, 2025

The interplay between prostate cancer and the tumor microenvironment is well documented of primary importance in disease evolution. Herein, we investigated prognostic value tissue urinary collagen-related molecular signatures predicting biochemical recurrence (BCR) after radical prostatectomy (RP). A comprehensive analysis 55 features was conducted using transcriptomic datasets (n = 1393), with further validation at proteomic level 69). Additionally, a distinct cohort 73) underwent urine-based peptidomic analysis, culminating urine-derived model. Independent significance assessed Cox proportional hazards modeling, while model's predictive performance benchmarked against established clinical metrics. An expression transcripts identified 11 significantly associated BCR (C-index: 0.55-0.72, p < 0.002). Multivariable models incorporating these enhanced accuracy, surpassing variables 0.66-0.89, Proteomic confirmed five key collagen proteins, model 0.73, 95% confidence interval: 0.62-0.85) demonstrated strong potential, although limited by small patient numbers. collagen-based predicted overall survival significant 0.59-0.70, 0.01). Collagen-based both urine emerge as robust biomarkers for following RP.

Language: Английский

Citations

0

Facile Synthesis of MOF-Derived Graphitic Carbon-Decorated NiVO4 as an Ultra-Sensitive Electrochemical Sensor for Non-enzymatic Detection of Sarcosine DOI
Sufian Rasheed, Muhammad Ikram, Batool Fatima

et al.

Journal of Alloys and Compounds, Journal Year: 2025, Volume and Issue: unknown, P. 180867 - 180867

Published: May 1, 2025

Language: Английский

Citations

0

Promoter hypermethylation of Y-chromosome gene PRKY as a potential biomarker for the early diagnosis of prostate cancer DOI Creative Commons
正道 神代, Hongbing Chen,

Kaiwen Feng

et al.

Epigenomics, Journal Year: 2024, Volume and Issue: 16(11-12), P. 835 - 850

Published: June 17, 2024

Aim: To develop a methylation marker of Y-chromosome gene in the early diagnosis prostate cancer (PCa). Materials & methods: We utilized bioinformatics analysis to identify expression and promoter PRKY PCa other common malignancies. Single-center experiments were conducted validate diagnostic value PCa. Results: was significantly down-regulated its mechanism may be related methylation. is highly specific for PCa, which superior prostate-specific antigen, mpMRI excellent molecular biomarkers. Conclusion: potential accurate

Language: Английский

Citations

1