Enhanced TaqMan qPCR Assay for Phytophthora cinnamomi Detection and Quantification
Forest Pathology,
Journal Year:
2025,
Volume and Issue:
55(2)
Published: March 12, 2025
ABSTRACT
Phytophthora
cinnamomi
is
one
of
the
world's
most
invasive
plant
pathogens,
requiring
accurate
detection
in
both
and
soil
samples
for
effective
disease
management.
This
study
compares
existing
qPCR
assays
with
newly
developed
targeting
internal
transcribed
spacer
(ITS)
gene
improved
detection.
Our
findings
revealed
that
few
current
primers
reliably
distinguish
P.
from
closely
related
species,
even
those
did
showed
inadequate
sensitivity.
To
address
this,
we
designed
novel
a
species‐specific
probe
ITS
region,
achieving
consistent
amplification
limit
10
fg.
The
new
assay
successfully
detected
artificial
symptomatic
samples,
ensuring
rapid
precise
identification.
optimised
detects
quantifies
soil,
providing
superior
sensitivity
specificity
over
methods
supporting
more
pathogen
Language: Английский
Dual transcriptomic analysis reveals early induced Castanea defense-related genes and Phytophthora cinnamomi effectors
Frontiers in Plant Science,
Journal Year:
2024,
Volume and Issue:
15
Published: Aug. 12, 2024
Phytophthora
cinnamomi
Rands
devastates
forest
species
worldwide,
causing
significant
ecological
and
economic
impacts.
The
European
chestnut
(
Castanea
sativa
)
is
susceptible
to
this
hemibiotrophic
oomycete,
whereas
the
Asian
chestnuts
crenata
mollissima
are
resistant
have
been
successfully
used
as
resistance
donors
in
breeding
programs.
molecular
mechanisms
underlying
different
disease
outcomes
among
a
key
foundation
for
developing
science-based
control
strategies.
However,
these
still
poorly
understood.
Dual
RNA
sequencing
was
performed
C.
roots
inoculated
with
P.
cinnamomi.
studied
time
points
represent
pathogen’s
lifestyle
previously
described
at
cellular
level.
expressed
several
genes
related
pathogenicity
both
species,
such
cell
wall–degrading
enzymes,
host
nutrient
uptake
transporters,
effectors.
expression
of
effectors
modulation
programmed
death
elicitins
NLPs
sporulation-related
higher
chestnut.
After
pathogen
inoculation,
1,556
488
were
differentially
by
,
respectively.
most
transcriptional
changes
occur
2
h
after
inoculation
(hai)
48
hai
.
Nevertheless,
induced
more
defense-related
genes,
indicating
that
response
controlled
multiple
loci,
including
pattern
recognition
receptors,
involved
phenylpropanoid,
salicylic
acid
ethylene/jasmonic
pathways,
antifungal
genes.
Importantly,
results
validate
observed
responses
Collectively,
study
provides
comprehensive
time-resolved
description
chestnut–
dynamic,
revealing
new
insights
into
important
strategies
development.
Language: Английский
The New Report of Root Rot on Fatsia japonica Caused by Phytophthora nicotianae in China
Jing Zhou,
No information about this author
Ting‐Yan Xu,
No information about this author
Xiaoqiao Xu
No information about this author
et al.
Forests,
Journal Year:
2023,
Volume and Issue:
14(7), P. 1459 - 1459
Published: July 17, 2023
As
an
ornamental
plant,
Fatsia
japonica
has
been
widely
used
in
gardens.
From
April
2021
to
2022,
a
disease
that
caused
the
wilting
and
root
rot
of
F.
large
area
was
observed,
which
eventually
led
plants
dying,
while
leaves
did
not
fall
off.
This
greatly
reduced
landscape
effect
plants.
An
oomycete
species
isolated
from
roots
infected
colony
morphology
slightly
radial
stellate,
aerial
mycelium
flocculent.
Oval
sporangia
with
papillae,
apical
chlamydospores
zoospores
formed
were
observed.
The
morphological
characteristics
consistent
Phytophthora.
For
accurate
identification,
internal
transcribed
spacer
(ITS),
cytochrome
oxidase
subunit
II
(COXII)
ribosomal
(LSU)
genes
amplified
sequenced.
identified
as
Phytophthora
nicotianae
using
phylogenetic
analysis.
Finally,
reproduced
by
inoculating
healthy
zoospore
suspension;
symptoms
those
natural
infections,
isolate
obtained
artificially
had
same
inoculated
isolate.
results
demonstrated
P.
is
pathogenic
factor
rot.
japonica.
first
report
on
China.
Language: Английский
Ecophysiology of Mediterranean Chestnut (Castanea sativa Mill.) Forests: Effects of Pruning Studied through an Advanced IoT System
Forests,
Journal Year:
2024,
Volume and Issue:
15(9), P. 1579 - 1579
Published: Sept. 9, 2024
Chestnut
(Castanea
sativa
Mill.)
forests
in
the
Mediterranean
region
are
facing
increasing
abandonment
due
to
a
combination
of
factors,
ranging
from
climate
change
socioeconomic
issues.
The
recovery
chestnut
ecosystems
and
their
preservation
valorization
key
ensuring
supply
wide
spectrum
ecosystem
services
they
provide
preventing
detrimental
environmental
shifts.
study’s
objective
was
evidence
on
effects
different
management
options
ecophysiology
forests,
with
diverse
pruning
intensities
(low,
medium,
high
intensity
versus
no
pruning)
tested
an
abandoned
stand
central
Italy
aim
recovering
rehabilitating
it
for
fruit
production.
Innovative
Internet
Things
(IoT)
‘Tree
Talker’
devices
were
installed
single
trees
continuously
monitor
measure
ecophysiological
(i.e.,
water
transport,
net
primary
productivity,
foliage
development)
microclimatic
parameters.
Results
show
reduction
use
subjected
medium-
high-intensity
treatments,
along
decrease
carbon
sequestration
function.
However,
interestingly,
results
highlight
that
regain
usual
sap
flow
sink
activity
at
end
first
post-pruning
growing
season
fully
realign
during
following
year,
as
also
confirmed
by
NDVI
values.
As
such,
this
paper
demonstrates
efficacy
managing
initial
setback
resulting
is
rapidly
remedied
advantage
reviving
Additionally,
reduced
demand
induced
could
represent
promising
adaptation
strategy
change,
bolstering
resilience
prolonged
intensified
drought
periods,
which
projected
increase
under
future
scenarios,
particularly
region.
Language: Английский
Castanea crenata Ginkbilobin2-like as a resistance gene to Phytophthora cinnamomi infection
Acta Horticulturae,
Journal Year:
2024,
Volume and Issue:
1400, P. 77 - 88
Published: July 1, 2024
Language: Английский
Overexpression of Ginkbilobin-2 homologous domain gene improves tolerance to Phytophthora cinnamomi in somatic embryos of Quercus suber
Susana Serrazina,
No information about this author
MaTeresa Martínez,
No information about this author
Serine Soudani
No information about this author
et al.
Scientific Reports,
Journal Year:
2024,
Volume and Issue:
14(1)
Published: Aug. 21, 2024
Abstract
In
recent
decades
an
extensive
mortality
and
decline
of
Quercus
suber
populations
mainly
caused
by
Phytophthora
cinnamomi
has
been
observed.
the
current
study,
a
chestnut
gene
homologous
to
ginkbilobin-2
(Cast_
Gnk2-like
),
which
in
Ginkgo
biloba
codifies
antifungal
protein,
was
transferred
into
cork
oak
somatic
embryos
three
different
embryogenic
lines
Agrobacterium
mediated
transformation.
The
transformation
efficiency
varied
on
genotype
from
2.5
9.2%,
total
22
independent
transformed
were
obtained.
presence
Cast_Gnk2-like
transgenic
verified
all
PCR.
number
transgene
copies
estimated
qPCR
with
high
proliferation
ability
it
between
1
5.
addition,
expression
levels
determined
lines,
higher
derived
ALM6-WT.
Transgenic
plants
obtained
evaluated
after
cold
storage
for
2
months
subsequent
transfer
germination
medium.
vitro
tolerance
tests
made
under
controlled
conditions
following
zoospore
treatment
showed
that
overexpressing
improved
against
Pc
when
compared
wild
type
ones.
Language: Английский
Application of Plant Biotechnology in Forestry
Forests,
Journal Year:
2023,
Volume and Issue:
14(11), P. 2148 - 2148
Published: Oct. 28, 2023
Forests,
often
referred
to
as
the
lungs
of
our
planet,
stand
a
testament
incredible
diversity
and
significance
terrestrial
ecosystems
[...]
Language: Английский